RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NPC1L1Q9UHC9 1359 aa28■■■□□ 2.07
HMGA2-211ENST00000545998 MAP3K19Q56UN5 1328 aa28■■■□□ 2.07
HMGA2-211ENST00000545998 MAP2P11137 1827 aaKnown RBP27.99■■■□□ 2.07
HMGA2-211ENST00000545998 COL5A2P05997 1499 aaPredicted RBP27.98■■■□□ 2.07
HMGA2-211ENST00000545998 RRS1Q15050 365 aaKnown RBP27.98■■■□□ 2.07
HMGA2-211ENST00000545998 DDX10Q13206 875 aaKnown RBP27.97■■■□□ 2.07
HMGA2-211ENST00000545998 VPS72Q15906 364 aa27.97■■■□□ 2.07
HMGA2-211ENST00000545998 MORC1Q86VD1 984 aa27.96■■■□□ 2.07
HMGA2-211ENST00000545998 CC2D1BQ5T0F9 858 aaKnown RBP27.95■■■□□ 2.07
HMGA2-211ENST00000545998 IP6K1Q92551 441 aa27.94■■■□□ 2.06
HMGA2-211ENST00000545998 STRN4Q9NRL3 753 aa27.94■■■□□ 2.06
HMGA2-211ENST00000545998 PEAK1Q9H792 1746 aa27.94■■■□□ 2.06
HMGA2-211ENST00000545998 TNNT2P45379 298 aaPredicted RBP27.94■■■□□ 2.06
HMGA2-211ENST00000545998 EVA1CP58658 441 aa27.94■■■□□ 2.06
HMGA2-211ENST00000545998 RTL1A6NKG5 1358 aa27.93■■■□□ 2.06
HMGA2-211ENST00000545998 GLI3P10071 1580 aa27.92■■■□□ 2.06
HMGA2-211ENST00000545998 BLMP54132 1417 aaPredicted RBP27.92■■■□□ 2.06
HMGA2-211ENST00000545998 AMPHP49418 695 aa27.92■■■□□ 2.06
HMGA2-211ENST00000545998 GJD4Q96KN9 370 aaPredicted RBP27.92■■■□□ 2.06
HMGA2-211ENST00000545998 RXRBP28702 533 aa27.91■■■□□ 2.06
HMGA2-211ENST00000545998 HOXC9P31274 260 aa27.91■■■□□ 2.06
HMGA2-211ENST00000545998 RBM6P78332 1123 aaKnown RBP27.91■■■□□ 2.06
HMGA2-211ENST00000545998 EMILIN1Q9Y6C2 1016 aa27.91■■■□□ 2.06
HMGA2-211ENST00000545998 KIF24Q5T7B8 1368 aa27.91■■■□□ 2.06
HMGA2-211ENST00000545998 LARP1Q6PKG0 1096 aaKnown RBP27.9■■■□□ 2.06
HMGA2-211ENST00000545998 POLKQ9UBT6 870 aa27.9■■■□□ 2.06
HMGA2-211ENST00000545998 SPATA31A5Q5VU36 1347 aa27.9■■■□□ 2.06
HMGA2-211ENST00000545998 SPATA31A7Q8IWB4 1347 aa27.9■■■□□ 2.06
HMGA2-211ENST00000545998 CCDC9Q9Y3X0 531 aaKnown RBP27.89■■■□□ 2.05
HMGA2-211ENST00000545998 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
HMGA2-211ENST00000545998 WDR17Q8IZU2 1322 aa27.88■■■□□ 2.05
HMGA2-211ENST00000545998 FLT4P35916 1363 aa27.88■■■□□ 2.05
HMGA2-211ENST00000545998 ERBB3P21860 1342 aa27.87■■■□□ 2.05
HMGA2-211ENST00000545998 SMG6Q86US8 1419 aaKnown RBP27.86■■■□□ 2.05
HMGA2-211ENST00000545998 SPATA31A1Q5TZJ5 1347 aa27.86■■■□□ 2.05
HMGA2-211ENST00000545998 CRB1P82279 1406 aa27.86■■■□□ 2.05
HMGA2-211ENST00000545998 ANKRD24Q8TF21 1146 aa27.86■■■□□ 2.05
HMGA2-211ENST00000545998 INSRP06213 1382 aa27.84■■■□□ 2.05
HMGA2-211ENST00000545998 CDK12Q9NYV4 1490 aaPredicted RBP27.84■■■□□ 2.05
HMGA2-211ENST00000545998 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
HMGA2-211ENST00000545998 CSB-PGBD3P0DP91 1061 aa27.83■■■□□ 2.05
HMGA2-211ENST00000545998 HSP90AB2PQ58FF8 381 aa27.83■■■□□ 2.05
HMGA2-211ENST00000545998 FAM208AQ9UK61 1670 aaKnown RBP27.83■■■□□ 2.05
HMGA2-211ENST00000545998 TOM1L2Q6ZVM7 507 aa27.82■■■□□ 2.04
HMGA2-211ENST00000545998 ILDR2Q71H61 639 aa27.82■■■□□ 2.04
HMGA2-211ENST00000545998 LTV1Q96GA3 475 aaPredicted RBP27.81■■■□□ 2.04
HMGA2-211ENST00000545998 USP35Q9P2H5 1018 aa27.8■■■□□ 2.04
HMGA2-211ENST00000545998 RGPD2P0DJD1 1756 aa27.8■■■□□ 2.04
HMGA2-211ENST00000545998 RGS12O14924 1447 aa27.79■■■□□ 2.04
HMGA2-211ENST00000545998 ONECUT3O60422 494 aaPredicted RBP27.79■■■□□ 2.04
HMGA2-211ENST00000545998 CARD10Q9BWT7 1032 aa27.79■■■□□ 2.04
HMGA2-211ENST00000545998 THRAP3Q9Y2W1 955 aaKnown RBP27.78■■■□□ 2.04
HMGA2-211ENST00000545998 FAM98CQ17RN3 349 aaKnown RBP27.77■■■□□ 2.04
HMGA2-211ENST00000545998 TCP11L2Q8N4U5 519 aa27.77■■■□□ 2.04
HMGA2-211ENST00000545998 PARD3Q8TEW0 1356 aa27.77■■■□□ 2.04
HMGA2-211ENST00000545998 THSD7AQ9UPZ6 1657 aa27.76■■■□□ 2.03
HMGA2-211ENST00000545998 BARGINQ6ZT62 677 aa27.76■■■□□ 2.03
HMGA2-211ENST00000545998 NLRP2Q9NX02 1062 aa27.76■■■□□ 2.03
HMGA2-211ENST00000545998 WNK3Q9BYP7 1800 aa27.76■■■□□ 2.03
HMGA2-211ENST00000545998 MTHFSP49914 203 aa27.75■■■□□ 2.03
HMGA2-211ENST00000545998 EP400Q96L91 3159 aa27.73■■■□□ 2.03
HMGA2-211ENST00000545998 BRWD3Q6RI45 1802 aa27.72■■■□□ 2.03
HMGA2-211ENST00000545998 SEPT12Q8IYM1 358 aa27.72■■■□□ 2.03
HMGA2-211ENST00000545998 PPP2R1AP30153 589 aa27.71■■■□□ 2.03
HMGA2-211ENST00000545998 EIF4A2Q14240 407 aaKnown RBP27.7■■■□□ 2.03
HMGA2-211ENST00000545998 NBPF6Q5VWK0 638 aa27.7■■■□□ 2.03
HMGA2-211ENST00000545998 NBPF4Q96M43 638 aa27.7■■■□□ 2.03
HMGA2-211ENST00000545998 PARP4Q9UKK3 1724 aaKnown RBP27.69■■■□□ 2.02
HMGA2-211ENST00000545998 DISP2A7MBM2 1401 aa27.68■■■□□ 2.02
HMGA2-211ENST00000545998 RALBP1Q15311 655 aa27.68■■■□□ 2.02
HMGA2-211ENST00000545998 A0A0G2JS52 829 aa27.66■■■□□ 2.02
HMGA2-211ENST00000545998 MYT1Q01538 1121 aa27.66■■■□□ 2.02
HMGA2-211ENST00000545998 NCAPD2Q15021 1401 aa27.65■■■□□ 2.02
HMGA2-211ENST00000545998 COL3A1P02461 1466 aaPredicted RBP27.65■■■□□ 2.02
HMGA2-211ENST00000545998 USHBP1Q8N6Y0 703 aa27.65■■■□□ 2.02
HMGA2-211ENST00000545998 EYA1Q99502 592 aa27.65■■■□□ 2.02
HMGA2-211ENST00000545998 CDCA7Q9BWT1 371 aaPredicted RBP27.65■■■□□ 2.02
HMGA2-211ENST00000545998 LRRC37A3O60309 1634 aa27.64■■■□□ 2.01
HMGA2-211ENST00000545998 IL13P35225 146 aa27.63■■■□□ 2.01
HMGA2-211ENST00000545998 RGPD1P0DJD0 1748 aa27.63■■■□□ 2.01
HMGA2-211ENST00000545998 IL2RBP14784 551 aa27.61■■■□□ 2.01
HMGA2-211ENST00000545998 PRKRIP1Q9H875 184 aaPredicted RBP27.61■■■□□ 2.01
HMGA2-211ENST00000545998 IGSF1Q8N6C5 1336 aa27.6■■■□□ 2.01
HMGA2-211ENST00000545998 DIAPH1O60610 1272 aaKnown RBP27.59■■■□□ 2.01
HMGA2-211ENST00000545998 KRT27Q7Z3Y8 459 aa27.59■■■□□ 2.01
HMGA2-211ENST00000545998 CFAP53Q96M91 514 aa27.58■■■□□ 2.01
HMGA2-211ENST00000545998 MEGF6O75095 1541 aa27.58■■■□□ 2.01
HMGA2-211ENST00000545998 MYBBP1AQ9BQG0 1328 aaKnown RBP27.58■■■□□ 2
HMGA2-211ENST00000545998 DDB1Q16531 1140 aa27.57■■■□□ 2
HMGA2-211ENST00000545998 TNS2Q63HR2 1409 aa27.55■■■□□ 2
HMGA2-211ENST00000545998 OVOS2A0A0G2JMS6 1433 aa27.55■■■□□ 2
HMGA2-211ENST00000545998 EXOC5O00471 708 aa27.54■■■□□ 2
HMGA2-211ENST00000545998 PDE3BQ13370 1112 aa27.54■■■□□ 2
HMGA2-211ENST00000545998 RAPGEF4Q8WZA2 1011 aa27.54■■■□□ 2
HMGA2-211ENST00000545998 SHANK3Q9BYB0 1731 aa27.52■■■□□ 2
HMGA2-211ENST00000545998 TATP17735 454 aaPredicted RBP27.52■■■□□ 2
HMGA2-211ENST00000545998 KDRP35968 1356 aa27.51■■□□□ 1.99
HMGA2-211ENST00000545998 SULT6B1Q6IMI4 303 aa27.5■■□□□ 1.99
HMGA2-211ENST00000545998 AEBP1Q8IUX7 1158 aa27.5■■□□□ 1.99
HMGA2-211ENST00000545998 PKD1L3Q7Z443 1732 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms