RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TMC1Q8TDI8 760 aa29.89■■■□□ 2.38
SCARB1-210ENST00000545493 AXIN2Q9Y2T1 843 aa29.89■■■□□ 2.38
SCARB1-210ENST00000545493 LTN1O94822 1766 aa29.89■■■□□ 2.38
SCARB1-210ENST00000545493 ST20-MTHFSA0A0A6YYL1 179 aa29.88■■■□□ 2.37
SCARB1-210ENST00000545493 SLC12A5Q9H2X9 1139 aa29.88■■■□□ 2.37
SCARB1-210ENST00000545493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.87■■■□□ 2.37
SCARB1-210ENST00000545493 NME9Q86XW9 330 aa29.86■■■□□ 2.37
SCARB1-210ENST00000545493 PUS7Q96PZ0 661 aaKnown RBP29.86■■■□□ 2.37
SCARB1-210ENST00000545493 WDR17Q8IZU2 1322 aa29.86■■■□□ 2.37
SCARB1-210ENST00000545493 OVOS2A0A0J9YW53 1432 aa29.86■■■□□ 2.37
SCARB1-210ENST00000545493 OVOS2Q6IE36 1432 aa29.86■■■□□ 2.37
SCARB1-210ENST00000545493 USP47Q96K76 1375 aa29.85■■■□□ 2.37
SCARB1-210ENST00000545493 EN1Q05925 392 aaPredicted RBP29.84■■■□□ 2.37
SCARB1-210ENST00000545493 FAM196AQ6ZSG2 479 aa29.84■■■□□ 2.37
SCARB1-210ENST00000545493 HDGFL2Q7Z4V5 671 aaPredicted RBP29.84■■■□□ 2.37
SCARB1-210ENST00000545493 RREB1Q92766 1687 aa29.84■■■□□ 2.37
SCARB1-210ENST00000545493 NINLQ9Y2I6 1382 aa29.83■■■□□ 2.37
SCARB1-210ENST00000545493 PDE3BQ13370 1112 aa29.82■■■□□ 2.36
SCARB1-210ENST00000545493 TOM1L2Q6ZVM7 507 aa29.82■■■□□ 2.36
SCARB1-210ENST00000545493 TRIM37O94972 964 aa29.81■■■□□ 2.36
SCARB1-210ENST00000545493 TERF2IPQ9NYB0 399 aa29.79■■■□□ 2.36
SCARB1-210ENST00000545493 OVOS2A0A0G2JMS6 1433 aa29.79■■■□□ 2.36
SCARB1-210ENST00000545493 NUP188Q5SRE5 1749 aa29.78■■■□□ 2.36
SCARB1-210ENST00000545493 LRP5O75197 1615 aa29.78■■■□□ 2.36
SCARB1-210ENST00000545493 SBF2Q86WG5 1849 aa29.78■■■□□ 2.36
SCARB1-210ENST00000545493 EZH2Q15910 746 aaKnown RBP29.75■■■□□ 2.35
SCARB1-210ENST00000545493 MYOM1P52179 1685 aa29.73■■■□□ 2.35
SCARB1-210ENST00000545493 CAMKK2Q96RR4 588 aa29.73■■■□□ 2.35
SCARB1-210ENST00000545493 CARD10Q9BWT7 1032 aa29.73■■■□□ 2.35
SCARB1-210ENST00000545493 ANKRD36BQ8N2N9 1353 aa29.73■■■□□ 2.35
SCARB1-210ENST00000545493 PARD3Q8TEW0 1356 aa29.73■■■□□ 2.35
SCARB1-210ENST00000545493 ERBB3P21860 1342 aa29.72■■■□□ 2.35
SCARB1-210ENST00000545493 CLSPNQ9HAW4 1339 aa29.72■■■□□ 2.35
SCARB1-210ENST00000545493 CSB-PGBD3P0DP91 1061 aa29.72■■■□□ 2.35
SCARB1-210ENST00000545493 DDB1Q16531 1140 aa29.72■■■□□ 2.35
SCARB1-210ENST00000545493 RGPD3A6NKT7 1758 aaPredicted RBP29.72■■■□□ 2.35
SCARB1-210ENST00000545493 RGPD4Q7Z3J3 1758 aa29.72■■■□□ 2.35
SCARB1-210ENST00000545493 PSDA5PKW4 1024 aaPredicted RBP29.71■■■□□ 2.35
SCARB1-210ENST00000545493 CCDC7Q96M83 1385 aa29.71■■■□□ 2.35
SCARB1-210ENST00000545493 SLC24A1O60721 1099 aa29.7■■■□□ 2.35
SCARB1-210ENST00000545493 APBA3O96018 575 aa29.7■■■□□ 2.35
SCARB1-210ENST00000545493 TNS2Q63HR2 1409 aa29.7■■■□□ 2.34
SCARB1-210ENST00000545493 PCGF6Q9BYE7 350 aa29.68■■■□□ 2.34
SCARB1-210ENST00000545493 FAM208AQ9UK61 1670 aaKnown RBP29.67■■■□□ 2.34
SCARB1-210ENST00000545493 TMF1P82094 1093 aa29.67■■■□□ 2.34
SCARB1-210ENST00000545493 CDCA7Q9BWT1 371 aaPredicted RBP29.67■■■□□ 2.34
SCARB1-210ENST00000545493 BCL9O00512 1426 aa29.66■■■□□ 2.34
SCARB1-210ENST00000545493 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
SCARB1-210ENST00000545493 KIF20BQ96Q89 1820 aa29.66■■■□□ 2.34
SCARB1-210ENST00000545493 MARCH10Q8NA82 808 aaPredicted RBP29.64■■■□□ 2.34
SCARB1-210ENST00000545493 C11orf95C9JLR9 678 aaPredicted RBP29.63■■■□□ 2.33
SCARB1-210ENST00000545493 R3HDM1Q15032 1099 aaKnown RBP29.62■■■□□ 2.33
SCARB1-210ENST00000545493 ANKRD24Q8TF21 1146 aa29.61■■■□□ 2.33
SCARB1-210ENST00000545493 NHSQ6T4R5 1651 aa29.6■■■□□ 2.33
SCARB1-210ENST00000545493 COG3Q96JB2 828 aa29.59■■■□□ 2.33
SCARB1-210ENST00000545493 PTF1AQ7RTS3 328 aa29.58■■■□□ 2.33
SCARB1-210ENST00000545493 NLRP2Q9NX02 1062 aa29.58■■■□□ 2.33
SCARB1-210ENST00000545493 MAP3K19Q56UN5 1328 aa29.56■■■□□ 2.32
SCARB1-210ENST00000545493 IP6K1Q92551 441 aa29.56■■■□□ 2.32
SCARB1-210ENST00000545493 RGPD2P0DJD1 1756 aa29.55■■■□□ 2.32
SCARB1-210ENST00000545493 RTL1A6NKG5 1358 aa29.53■■■□□ 2.32
SCARB1-210ENST00000545493 FBLN1P23142 703 aa29.53■■■□□ 2.32
SCARB1-210ENST00000545493 CDCA8Q53HL2 280 aa29.53■■■□□ 2.32
SCARB1-210ENST00000545493 BCL11BQ9C0K0 894 aaPredicted RBP29.53■■■□□ 2.32
SCARB1-210ENST00000545493 EXOC5O00471 708 aa29.52■■■□□ 2.32
SCARB1-210ENST00000545493 FYB1O15117 783 aa29.51■■■□□ 2.31
SCARB1-210ENST00000545493 IL2RBP14784 551 aa29.51■■■□□ 2.31
SCARB1-210ENST00000545493 HOXC9P31274 260 aa29.51■■■□□ 2.31
SCARB1-210ENST00000545493 GGNBP2Q9H3C7 697 aa29.51■■■□□ 2.31
SCARB1-210ENST00000545493 NSD3Q9BZ95 1437 aa29.5■■■□□ 2.31
SCARB1-210ENST00000545493 SHANK3Q9BYB0 1731 aa29.5■■■□□ 2.31
SCARB1-210ENST00000545493 PLSCR1O15162 318 aa29.49■■■□□ 2.31
SCARB1-210ENST00000545493 LTV1Q96GA3 475 aaPredicted RBP29.48■■■□□ 2.31
SCARB1-210ENST00000545493 RRS1Q15050 365 aaKnown RBP29.46■■■□□ 2.31
SCARB1-210ENST00000545493 BTAF1O14981 1849 aa29.45■■■□□ 2.3
SCARB1-210ENST00000545493 ANKRD26Q9UPS8 1709 aa29.45■■■□□ 2.3
SCARB1-210ENST00000545493 AMPHP49418 695 aa29.44■■■□□ 2.3
SCARB1-210ENST00000545493 CARD14Q9BXL6 1004 aa29.44■■■□□ 2.3
SCARB1-210ENST00000545493 ANO8Q9HCE9 1232 aaPredicted RBP29.44■■■□□ 2.3
SCARB1-210ENST00000545493 MEGF6O75095 1541 aa29.44■■■□□ 2.3
SCARB1-210ENST00000545493 CASZ1Q86V15 1759 aa29.44■■■□□ 2.3
SCARB1-210ENST00000545493 NBPF14Q5TI25 921 aa29.43■■■□□ 2.3
SCARB1-210ENST00000545493 KCNQ2O43526 872 aa29.42■■■□□ 2.3
SCARB1-210ENST00000545493 CCER1Q8TC90 406 aaPredicted RBP29.42■■■□□ 2.3
SCARB1-210ENST00000545493 DOT1LQ8TEK3 1739 aa29.4■■■□□ 2.3
SCARB1-210ENST00000545493 PROM2Q8N271 834 aa29.4■■■□□ 2.3
SCARB1-210ENST00000545493 ACSBG1Q96GR2 724 aa29.4■■■□□ 2.3
SCARB1-210ENST00000545493 PAPPAQ13219 1627 aa29.4■■■□□ 2.3
SCARB1-210ENST00000545493 FLT4P35916 1363 aa29.38■■■□□ 2.29
SCARB1-210ENST00000545493 SMG6Q86US8 1419 aaKnown RBP29.37■■■□□ 2.29
SCARB1-210ENST00000545493 KIF24Q5T7B8 1368 aa29.36■■■□□ 2.29
SCARB1-210ENST00000545493 INSRP06213 1382 aa29.35■■■□□ 2.29
SCARB1-210ENST00000545493 HSPA5P11021 654 aaKnown RBP29.34■■■□□ 2.29
SCARB1-210ENST00000545493 TXNRD1Q16881 649 aa29.34■■■□□ 2.29
SCARB1-210ENST00000545493 NBPF6Q5VWK0 638 aa29.33■■■□□ 2.29
SCARB1-210ENST00000545493 NBPF4Q96M43 638 aa29.33■■■□□ 2.29
SCARB1-210ENST00000545493 EIF4G2P78344 907 aaKnown RBP eCLIP29.32■■■□□ 2.282e-9■■■■□ 23.9
SCARB1-210ENST00000545493 HSP90AB2PQ58FF8 381 aa29.32■■■□□ 2.28
SCARB1-210ENST00000545493 USHBP1Q8N6Y0 703 aa29.32■■■□□ 2.28
SCARB1-210ENST00000545493 EMILIN1Q9Y6C2 1016 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms