RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 FLT4P35916 1363 aa17.54■□□□□ 0.4
CDCA3-210ENST00000545368 COL18A1P39060 1754 aa17.53■□□□□ 0.4
CDCA3-210ENST00000545368 LMO7Q8WWI1 1683 aa17.53■□□□□ 0.4
CDCA3-210ENST00000545368 CHRNA2Q15822 529 aa17.53■□□□□ 0.4
CDCA3-210ENST00000545368 BLMP54132 1417 aaPredicted RBP17.53■□□□□ 0.4
CDCA3-210ENST00000545368 MTHFSP49914 203 aa17.52■□□□□ 0.4
CDCA3-210ENST00000545368 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
CDCA3-210ENST00000545368 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.39
CDCA3-210ENST00000545368 RGPD5Q99666 1765 aa17.51■□□□□ 0.39
CDCA3-210ENST00000545368 FAM83GA6ND36 823 aa17.51■□□□□ 0.39
CDCA3-210ENST00000545368 HOXC9P31274 260 aa17.51■□□□□ 0.39
CDCA3-210ENST00000545368 IP6K1Q92551 441 aa17.51■□□□□ 0.39
CDCA3-210ENST00000545368 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
CDCA3-210ENST00000545368 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
CDCA3-210ENST00000545368 INSRP06213 1382 aa17.49■□□□□ 0.39
CDCA3-210ENST00000545368 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
CDCA3-210ENST00000545368 CAMTA1Q9Y6Y1 1673 aa17.48■□□□□ 0.39
CDCA3-210ENST00000545368 SLIT2O94813 1529 aa17.47■□□□□ 0.39
CDCA3-210ENST00000545368 NRAPQ86VF7 1730 aa17.47■□□□□ 0.39
CDCA3-210ENST00000545368 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
CDCA3-210ENST00000545368 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
CDCA3-210ENST00000545368 COL5A2P05997 1499 aaPredicted RBP17.47■□□□□ 0.39
CDCA3-210ENST00000545368 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
CDCA3-210ENST00000545368 AXIN2Q9Y2T1 843 aa17.46■□□□□ 0.39
CDCA3-210ENST00000545368 ERBB3P21860 1342 aa17.46■□□□□ 0.38
CDCA3-210ENST00000545368 COL3A1P02461 1466 aaPredicted RBP17.45■□□□□ 0.38
CDCA3-210ENST00000545368 CSB-PGBD3P0DP91 1061 aa17.45■□□□□ 0.38
CDCA3-210ENST00000545368 EVA1CP58658 441 aa17.45■□□□□ 0.38
CDCA3-210ENST00000545368 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
CDCA3-210ENST00000545368 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
CDCA3-210ENST00000545368 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
CDCA3-210ENST00000545368 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
CDCA3-210ENST00000545368 AFF2P51816 1311 aa17.44■□□□□ 0.38
CDCA3-210ENST00000545368 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
CDCA3-210ENST00000545368 USP21Q9UK80 565 aa17.43■□□□□ 0.38
CDCA3-210ENST00000545368 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
CDCA3-210ENST00000545368 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
CDCA3-210ENST00000545368 MIER1Q8N108 512 aa17.42■□□□□ 0.38
CDCA3-210ENST00000545368 NUDCQ9Y266 331 aa17.42■□□□□ 0.38
CDCA3-210ENST00000545368 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
CDCA3-210ENST00000545368 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
CDCA3-210ENST00000545368 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
CDCA3-210ENST00000545368 CRB1P82279 1406 aa17.4■□□□□ 0.38
CDCA3-210ENST00000545368 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
CDCA3-210ENST00000545368 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
CDCA3-210ENST00000545368 RGPD2P0DJD1 1756 aa17.4■□□□□ 0.38
CDCA3-210ENST00000545368 IL13P35225 146 aa17.39■□□□□ 0.37
CDCA3-210ENST00000545368 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
CDCA3-210ENST00000545368 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
CDCA3-210ENST00000545368 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
CDCA3-210ENST00000545368 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
CDCA3-210ENST00000545368 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
CDCA3-210ENST00000545368 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
CDCA3-210ENST00000545368 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDCA3-210ENST00000545368 TRPC5Q9UL62 973 aaPredicted RBP17.37■□□□□ 0.37
CDCA3-210ENST00000545368 VPS72Q15906 364 aa17.36■□□□□ 0.37
CDCA3-210ENST00000545368 EYA1Q99502 592 aa17.36■□□□□ 0.37
CDCA3-210ENST00000545368 CARD10Q9BWT7 1032 aa17.36■□□□□ 0.37
CDCA3-210ENST00000545368 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
CDCA3-210ENST00000545368 ATRNO75882 1429 aa17.36■□□□□ 0.37
CDCA3-210ENST00000545368 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
CDCA3-210ENST00000545368 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
CDCA3-210ENST00000545368 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
CDCA3-210ENST00000545368 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
CDCA3-210ENST00000545368 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDCA3-210ENST00000545368 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
CDCA3-210ENST00000545368 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
CDCA3-210ENST00000545368 WNK3Q9BYP7 1800 aa17.34■□□□□ 0.37
CDCA3-210ENST00000545368 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
CDCA3-210ENST00000545368 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
CDCA3-210ENST00000545368 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
CDCA3-210ENST00000545368 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
CDCA3-210ENST00000545368 THRAP3Q9Y2W1 955 aaKnown RBP17.33■□□□□ 0.36
CDCA3-210ENST00000545368 SULT6B1Q6IMI4 303 aa17.32■□□□□ 0.36
CDCA3-210ENST00000545368 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
CDCA3-210ENST00000545368 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
CDCA3-210ENST00000545368 PARP4Q9UKK3 1724 aaKnown RBP17.32■□□□□ 0.36
CDCA3-210ENST00000545368 HMOX1P09601 288 aa17.31■□□□□ 0.36
CDCA3-210ENST00000545368 KDRP35968 1356 aa17.3■□□□□ 0.36
CDCA3-210ENST00000545368 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
CDCA3-210ENST00000545368 GJD4Q96KN9 370 aaPredicted RBP17.3■□□□□ 0.36
CDCA3-210ENST00000545368 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
CDCA3-210ENST00000545368 GLI3P10071 1580 aa17.3■□□□□ 0.36
CDCA3-210ENST00000545368 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
CDCA3-210ENST00000545368 FCHSD2O94868 740 aa17.28■□□□□ 0.36
CDCA3-210ENST00000545368 NEFMP07197 916 aa17.28■□□□□ 0.36
CDCA3-210ENST00000545368 IL2RBP14784 551 aa17.28■□□□□ 0.36
CDCA3-210ENST00000545368 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CDCA3-210ENST00000545368 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
CDCA3-210ENST00000545368 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
CDCA3-210ENST00000545368 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
CDCA3-210ENST00000545368 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
CDCA3-210ENST00000545368 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
CDCA3-210ENST00000545368 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
CDCA3-210ENST00000545368 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
CDCA3-210ENST00000545368 MEGF6O75095 1541 aa17.26■□□□□ 0.35
CDCA3-210ENST00000545368 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CDCA3-210ENST00000545368 RBM6P78332 1123 aaKnown RBP17.26■□□□□ 0.35
CDCA3-210ENST00000545368 RGS17Q9UGC6 210 aaPredicted RBP17.26■□□□□ 0.35
CDCA3-210ENST00000545368 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms