RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
SCARB1-209ENST00000545305 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
SCARB1-209ENST00000545305 HSP90AB2PQ58FF8 381 aa18.25■□□□□ 0.51
SCARB1-209ENST00000545305 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-209ENST00000545305 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
SCARB1-209ENST00000545305 IP6K1Q92551 441 aa18.24■□□□□ 0.51
SCARB1-209ENST00000545305 LRRC59Q96AG4 307 aaKnown RBP18.24■□□□□ 0.51
SCARB1-209ENST00000545305 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
SCARB1-209ENST00000545305 NEFMP07197 916 aa18.23■□□□□ 0.51
SCARB1-209ENST00000545305 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
SCARB1-209ENST00000545305 ABCC6O95255 1503 aa18.23■□□□□ 0.51
SCARB1-209ENST00000545305 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
SCARB1-209ENST00000545305 CABLES1Q8TDN4 633 aa18.22■□□□□ 0.51
SCARB1-209ENST00000545305 RGPD1P0DJD0 1748 aa18.21■□□□□ 0.51
SCARB1-209ENST00000545305 COL16A1Q07092 1604 aaPredicted RBP18.21■□□□□ 0.51
SCARB1-209ENST00000545305 FCHSD2O94868 740 aa18.21■□□□□ 0.51
SCARB1-209ENST00000545305 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
SCARB1-209ENST00000545305 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
SCARB1-209ENST00000545305 CPDO75976 1380 aa18.2■□□□□ 0.5
SCARB1-209ENST00000545305 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
SCARB1-209ENST00000545305 SENP3-EIF4A1A0A087X0R7 540 aa18.19■□□□□ 0.5
SCARB1-209ENST00000545305 APAF1O14727 1248 aa18.19■□□□□ 0.5
SCARB1-209ENST00000545305 HMOX1P09601 288 aa18.18■□□□□ 0.5
SCARB1-209ENST00000545305 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-209ENST00000545305 RSPH6AQ9H0K4 717 aa18.18■□□□□ 0.5
SCARB1-209ENST00000545305 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-209ENST00000545305 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
SCARB1-209ENST00000545305 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-209ENST00000545305 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
SCARB1-209ENST00000545305 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
SCARB1-209ENST00000545305 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
SCARB1-209ENST00000545305 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
SCARB1-209ENST00000545305 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
SCARB1-209ENST00000545305 PRDM11Q9NQV5 511 aa18.15■□□□□ 0.5
SCARB1-209ENST00000545305 COL18A1P39060 1754 aa18.14■□□□□ 0.5
SCARB1-209ENST00000545305 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
SCARB1-209ENST00000545305 ANKRD24Q8TF21 1146 aa18.14■□□□□ 0.49
SCARB1-209ENST00000545305 EYA1Q99502 592 aa18.14■□□□□ 0.49
SCARB1-209ENST00000545305 FAM208AQ9UK61 1670 aaKnown RBP18.13■□□□□ 0.49
SCARB1-209ENST00000545305 RGPD5Q99666 1765 aa18.12■□□□□ 0.49
SCARB1-209ENST00000545305 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
SCARB1-209ENST00000545305 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
SCARB1-209ENST00000545305 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
SCARB1-209ENST00000545305 KDRP35968 1356 aa18.12■□□□□ 0.49
SCARB1-209ENST00000545305 RRP7AQ9Y3A4 280 aaKnown RBP18.11■□□□□ 0.49
SCARB1-209ENST00000545305 ERBB3P21860 1342 aa18.11■□□□□ 0.49
SCARB1-209ENST00000545305 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
SCARB1-209ENST00000545305 CAMTA1Q9Y6Y1 1673 aa18.1■□□□□ 0.49
SCARB1-209ENST00000545305 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
SCARB1-209ENST00000545305 NEUROD2Q15784 382 aa18.1■□□□□ 0.49
SCARB1-209ENST00000545305 AXIN2Q9Y2T1 843 aa18.1■□□□□ 0.49
SCARB1-209ENST00000545305 CSB-PGBD3P0DP91 1061 aa18.09■□□□□ 0.49
SCARB1-209ENST00000545305 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
SCARB1-209ENST00000545305 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
SCARB1-209ENST00000545305 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
SCARB1-209ENST00000545305 RGPD2P0DJD1 1756 aa18.08■□□□□ 0.48
SCARB1-209ENST00000545305 COL14A1Q05707 1796 aaKnown RBP18.08■□□□□ 0.48
SCARB1-209ENST00000545305 JCADQ9P266 1359 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 RIPK4P57078 832 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 NBPF6Q5VWK0 638 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 PHACTR3Q96KR7 559 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 NBPF4Q96M43 638 aa18.07■□□□□ 0.48
SCARB1-209ENST00000545305 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
SCARB1-209ENST00000545305 WWC1Q8IX03 1113 aa18.06■□□□□ 0.48
SCARB1-209ENST00000545305 NLRP2Q9NX02 1062 aa18.06■□□□□ 0.48
SCARB1-209ENST00000545305 COL5A2P05997 1499 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-209ENST00000545305 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
SCARB1-209ENST00000545305 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
SCARB1-209ENST00000545305 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
SCARB1-209ENST00000545305 WDR17Q8IZU2 1322 aa18.03■□□□□ 0.48
SCARB1-209ENST00000545305 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
SCARB1-209ENST00000545305 NUTM2BA6NNL0 878 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-209ENST00000545305 NUTM2EB1AL46 878 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-209ENST00000545305 E9PSI1 815 aa18.02■□□□□ 0.48
SCARB1-209ENST00000545305 EVA1CP58658 441 aa18.02■□□□□ 0.48
SCARB1-209ENST00000545305 NUTM2AQ8IVF1 878 aaPredicted RBP18.02■□□□□ 0.48
SCARB1-209ENST00000545305 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.47
SCARB1-209ENST00000545305 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
SCARB1-209ENST00000545305 CDCA7LQ96GN5 454 aa18.01■□□□□ 0.47
SCARB1-209ENST00000545305 TRIM35Q9UPQ4 493 aa18.01■□□□□ 0.47
SCARB1-209ENST00000545305 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
SCARB1-209ENST00000545305 ADAMTS2O95450 1211 aa18■□□□□ 0.47
SCARB1-209ENST00000545305 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
SCARB1-209ENST00000545305 RAPGEF4Q8WZA2 1011 aa18■□□□□ 0.47
SCARB1-209ENST00000545305 STRN4Q9NRL3 753 aa18■□□□□ 0.47
SCARB1-209ENST00000545305 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
SCARB1-209ENST00000545305 SLFN5Q08AF3 891 aa17.99■□□□□ 0.47
SCARB1-209ENST00000545305 MTHFSDQ2M296 383 aaKnown RBP17.99■□□□□ 0.47
SCARB1-209ENST00000545305 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
SCARB1-209ENST00000545305 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
SCARB1-209ENST00000545305 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
SCARB1-209ENST00000545305 IL16Q14005 1332 aa17.98■□□□□ 0.47
SCARB1-209ENST00000545305 TATP17735 454 aaPredicted RBP17.98■□□□□ 0.47
SCARB1-209ENST00000545305 HSPA1LP34931 641 aa17.98■□□□□ 0.47
SCARB1-209ENST00000545305 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
SCARB1-209ENST00000545305 RTF1Q92541 710 aaKnown RBP17.98■□□□□ 0.47
SCARB1-209ENST00000545305 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms