RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SLC15A2Q16348 729 aa13.81□□□□□ -0.2
CHD4-212ENST00000545083 SGIP1Q9BQI5 828 aa13.81□□□□□ -0.2
CHD4-212ENST00000545083 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 TOM1L2Q6ZVM7 507 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 STK32BQ9NY57 414 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 BCL9O00512 1426 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 SLIT3O75094 1523 aa13.8□□□□□ -0.2
CHD4-212ENST00000545083 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
CHD4-212ENST00000545083 RAB3GAP2Q9H2M9 1393 aa13.79□□□□□ -0.2
CHD4-212ENST00000545083 NLRP6P59044 892 aa13.78□□□□□ -0.2
CHD4-212ENST00000545083 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
CHD4-212ENST00000545083 CABP2Q9NPB3 220 aa13.78□□□□□ -0.2
CHD4-212ENST00000545083 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
CHD4-212ENST00000545083 COL18A1P39060 1754 aa13.78□□□□□ -0.2
CHD4-212ENST00000545083 WNK3Q9BYP7 1800 aa13.77□□□□□ -0.21
CHD4-212ENST00000545083 USP6P35125 1406 aa13.76□□□□□ -0.21
CHD4-212ENST00000545083 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
CHD4-212ENST00000545083 BRD4O60885 1362 aaPredicted RBP13.75□□□□□ -0.21
CHD4-212ENST00000545083 NBPF1Q3BBV0 1214 aa13.75□□□□□ -0.21
CHD4-212ENST00000545083 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
CHD4-212ENST00000545083 CDCA7Q9BWT1 371 aaPredicted RBP13.75□□□□□ -0.21
CHD4-212ENST00000545083 CHD4Q14839 1912 aa13.74□□□□□ -0.21
CHD4-212ENST00000545083 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
CHD4-212ENST00000545083 ARXQ96QS3 562 aa13.74□□□□□ -0.21
CHD4-212ENST00000545083 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
CHD4-212ENST00000545083 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
CHD4-212ENST00000545083 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
CHD4-212ENST00000545083 CEP350Q5VT06 3117 aa13.73□□□□□ -0.21
CHD4-212ENST00000545083 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
CHD4-212ENST00000545083 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
CHD4-212ENST00000545083 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
CHD4-212ENST00000545083 EXOC5O00471 708 aa13.72□□□□□ -0.21
CHD4-212ENST00000545083 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
CHD4-212ENST00000545083 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
CHD4-212ENST00000545083 ZNF827Q17R98 1081 aa13.71□□□□□ -0.21
CHD4-212ENST00000545083 ACSBG1Q96GR2 724 aa13.71□□□□□ -0.21
CHD4-212ENST00000545083 GOLGB1Q14789 3259 aaKnown RBP13.71□□□□□ -0.22
CHD4-212ENST00000545083 TNS2Q63HR2 1409 aa13.71□□□□□ -0.22
CHD4-212ENST00000545083 SOX12O15370 315 aa13.7□□□□□ -0.22
CHD4-212ENST00000545083 CSB-PGBD3P0DP91 1061 aa13.7□□□□□ -0.22
CHD4-212ENST00000545083 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
CHD4-212ENST00000545083 RGPD5Q99666 1765 aa13.69□□□□□ -0.22
CHD4-212ENST00000545083 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
CHD4-212ENST00000545083 GPR162Q16538 588 aa13.69□□□□□ -0.22
CHD4-212ENST00000545083 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
CHD4-212ENST00000545083 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CHD4-212ENST00000545083 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
CHD4-212ENST00000545083 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
CHD4-212ENST00000545083 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
CHD4-212ENST00000545083 NFAT5O94916 1531 aa13.66□□□□□ -0.22
CHD4-212ENST00000545083 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
CHD4-212ENST00000545083 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
CHD4-212ENST00000545083 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
CHD4-212ENST00000545083 QRICH2Q9H0J4 1663 aa13.66□□□□□ -0.22
CHD4-212ENST00000545083 ABCC6O95255 1503 aa13.65□□□□□ -0.22
CHD4-212ENST00000545083 PELP1Q8IZL8 1130 aaKnown RBP13.65□□□□□ -0.22
CHD4-212ENST00000545083 NLGN2Q8NFZ4 835 aa13.65□□□□□ -0.22
CHD4-212ENST00000545083 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
CHD4-212ENST00000545083 BTAF1O14981 1849 aa13.64□□□□□ -0.23
CHD4-212ENST00000545083 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
CHD4-212ENST00000545083 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
CHD4-212ENST00000545083 ERBB3P21860 1342 aa13.62□□□□□ -0.23
CHD4-212ENST00000545083 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
CHD4-212ENST00000545083 IL2RBP14784 551 aa13.61□□□□□ -0.23
CHD4-212ENST00000545083 YBX3P16989 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHD4-212ENST00000545083 KCNQ4P56696 695 aa13.61□□□□□ -0.23
CHD4-212ENST00000545083 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
CHD4-212ENST00000545083 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
CHD4-212ENST00000545083 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
CHD4-212ENST00000545083 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
CHD4-212ENST00000545083 POLD1P28340 1107 aa13.6□□□□□ -0.23
CHD4-212ENST00000545083 SLC27A3Q5K4L6 730 aa13.58□□□□□ -0.24
CHD4-212ENST00000545083 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
CHD4-212ENST00000545083 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
CHD4-212ENST00000545083 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
CHD4-212ENST00000545083 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
CHD4-212ENST00000545083 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
CHD4-212ENST00000545083 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
CHD4-212ENST00000545083 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
CHD4-212ENST00000545083 ATP10DQ9P241 1426 aa13.56□□□□□ -0.24
CHD4-212ENST00000545083 NME9Q86XW9 330 aa13.56□□□□□ -0.24
CHD4-212ENST00000545083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHD4-212ENST00000545083 GRIN3BO60391 1043 aa13.55□□□□□ -0.24
CHD4-212ENST00000545083 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
CHD4-212ENST00000545083 NSD2O96028 1365 aa13.54□□□□□ -0.24
CHD4-212ENST00000545083 PRIM1P49642 420 aaKnown RBP13.53□□□□□ -0.24
CHD4-212ENST00000545083 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
CHD4-212ENST00000545083 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
CHD4-212ENST00000545083 MON2Q7Z3U7 1717 aa13.53□□□□□ -0.24
CHD4-212ENST00000545083 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
CHD4-212ENST00000545083 COL23A1Q86Y22 540 aaPredicted RBP13.52□□□□□ -0.25
CHD4-212ENST00000545083 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
CHD4-212ENST00000545083 CD163L1Q9NR16 1453 aa13.52□□□□□ -0.25
CHD4-212ENST00000545083 LTN1O94822 1766 aa13.52□□□□□ -0.25
CHD4-212ENST00000545083 ADCY9O60503 1353 aa13.51□□□□□ -0.25
CHD4-212ENST00000545083 ANKRD36BQ8N2N9 1353 aa13.51□□□□□ -0.25
CHD4-212ENST00000545083 HSPA6P17066 643 aa13.51□□□□□ -0.25
CHD4-212ENST00000545083 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms