RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 TNNT2P45379 298 aaPredicted RBP23.97■■□□□ 1.43
LYSMD4-210ENST00000545021 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
LYSMD4-210ENST00000545021 BBXQ8WY36 941 aaPredicted RBP23.97■■□□□ 1.43
LYSMD4-210ENST00000545021 GTPBP4Q9BZE4 634 aaKnown RBP23.96■■□□□ 1.43
LYSMD4-210ENST00000545021 SETD1AO15047 1707 aaKnown RBP23.96■■□□□ 1.43
LYSMD4-210ENST00000545021 KIF20AO95235 890 aa23.96■■□□□ 1.43
LYSMD4-210ENST00000545021 ZNF445P59923 1031 aa23.95■■□□□ 1.43
LYSMD4-210ENST00000545021 TMF1P82094 1093 aa23.95■■□□□ 1.43
LYSMD4-210ENST00000545021 CLEC17AQ6ZS10 378 aa23.95■■□□□ 1.43
LYSMD4-210ENST00000545021 RBM25P49756 843 aaKnown RBP23.95■■□□□ 1.42
LYSMD4-210ENST00000545021 ZKSCAN5Q9Y2L8 839 aa23.95■■□□□ 1.42
LYSMD4-210ENST00000545021 GTF2E1P29083 439 aaPredicted RBP23.94■■□□□ 1.42
LYSMD4-210ENST00000545021 GOLGA6L22H0YM25 854 aa23.94■■□□□ 1.42
LYSMD4-210ENST00000545021 APAF1O14727 1248 aa23.94■■□□□ 1.42
LYSMD4-210ENST00000545021 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
LYSMD4-210ENST00000545021 ARID3AQ99856 593 aa23.92■■□□□ 1.42
LYSMD4-210ENST00000545021 HSP90AB1P08238 724 aaKnown RBP23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 NBPF1Q3BBV0 1214 aa23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 PPP4R3BQ5MIZ7 849 aa23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
LYSMD4-210ENST00000545021 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
LYSMD4-210ENST00000545021 AMER1Q5JTC6 1135 aaPredicted RBP23.9■■□□□ 1.42
LYSMD4-210ENST00000545021 STAC3Q96MF2 364 aa23.9■■□□□ 1.42
LYSMD4-210ENST00000545021 LETM1O95202 739 aaPredicted RBP23.89■■□□□ 1.41
LYSMD4-210ENST00000545021 DDX49Q9Y6V7 483 aaKnown RBP23.89■■□□□ 1.41
LYSMD4-210ENST00000545021 TOM1O60784 492 aa23.86■■□□□ 1.41
LYSMD4-210ENST00000545021 MYOM2P54296 1465 aa23.86■■□□□ 1.41
LYSMD4-210ENST00000545021 ASXL1Q8IXJ9 1541 aa23.85■■□□□ 1.41
LYSMD4-210ENST00000545021 RLBP1P12271 317 aa23.85■■□□□ 1.41
LYSMD4-210ENST00000545021 RARSP54136 660 aaKnown RBP23.85■■□□□ 1.41
LYSMD4-210ENST00000545021 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
LYSMD4-210ENST00000545021 VGFO15240 615 aaPredicted RBP23.84■■□□□ 1.41
LYSMD4-210ENST00000545021 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
LYSMD4-210ENST00000545021 UBAP1LF5GYI3 381 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 MYRIPQ8NFW9 859 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 SLC26A8Q96RN1 970 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 BCL11BQ9C0K0 894 aaPredicted RBP23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 CCDC39Q9UFE4 941 aa23.83■■□□□ 1.41
LYSMD4-210ENST00000545021 PDIA4P13667 645 aaKnown RBP23.82■■□□□ 1.4
LYSMD4-210ENST00000545021 TMEM94Q12767 1356 aa23.82■■□□□ 1.4
LYSMD4-210ENST00000545021 PTPRUQ92729 1446 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 BAG4O95429 457 aaKnown RBP23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 RBSNQ9H1K0 784 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 SSFA2P28290 1259 aa23.81■■□□□ 1.4
LYSMD4-210ENST00000545021 DCCP43146 1447 aa23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 ZSCAN23Q3MJ62 389 aa23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 NAP1L2Q9ULW6 460 aaPredicted RBP23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 PTCH1Q13635 1447 aa23.8■■□□□ 1.4
LYSMD4-210ENST00000545021 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
LYSMD4-210ENST00000545021 K7ELQ4 463 aaPredicted RBP23.78■■□□□ 1.4
LYSMD4-210ENST00000545021 TAF3Q5VWG9 929 aa23.78■■□□□ 1.4
LYSMD4-210ENST00000545021 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
LYSMD4-210ENST00000545021 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 GTF2F1P35269 517 aaKnown RBP eCLIP23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 MVPQ14764 893 aaKnown RBP23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 PRIMPOLQ96LW4 560 aa23.76■■□□□ 1.39
LYSMD4-210ENST00000545021 HDAC1Q13547 482 aaPredicted RBP23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 PROSER2Q86WR7 435 aaPredicted RBP23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 ZNF710Q8N1W2 664 aa23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 KIF2CQ99661 725 aa23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 TMEM51Q9NW97 253 aa23.75■■□□□ 1.39
LYSMD4-210ENST00000545021 CAVIN1Q6NZI2 390 aaKnown RBP23.74■■□□□ 1.39
LYSMD4-210ENST00000545021 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.74■■□□□ 1.39
LYSMD4-210ENST00000545021 MSH6P52701 1360 aa23.74■■□□□ 1.39
LYSMD4-210ENST00000545021 CBX1P83916 185 aa23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 IPO4Q8TEX9 1081 aaKnown RBP23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 TECPR2O15040 1411 aa23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 METP08581 1390 aa23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 PRIM1P49642 420 aaKnown RBP23.73■■□□□ 1.39
LYSMD4-210ENST00000545021 HMGN5P82970 282 aaKnown RBP23.72■■□□□ 1.39
LYSMD4-210ENST00000545021 KIAA2012Q0VF49 1180 aa23.72■■□□□ 1.39
LYSMD4-210ENST00000545021 CD2BP2O95400 341 aaKnown RBP23.71■■□□□ 1.39
LYSMD4-210ENST00000545021 LMBRD1Q9NUN5 540 aa23.71■■□□□ 1.39
LYSMD4-210ENST00000545021 FOXD4L1Q9NU39 408 aa23.7■■□□□ 1.38
LYSMD4-210ENST00000545021 GAS2L2Q8NHY3 880 aa23.69■■□□□ 1.38
LYSMD4-210ENST00000545021 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
LYSMD4-210ENST00000545021 ATP2B3Q16720 1220 aa23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 ADGRL3Q9HAR2 1447 aa23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 CDCA8Q53HL2 280 aa23.68■■□□□ 1.38
LYSMD4-210ENST00000545021 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
LYSMD4-210ENST00000545021 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
LYSMD4-210ENST00000545021 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
LYSMD4-210ENST00000545021 NUCB2P80303 420 aa23.66■■□□□ 1.38
LYSMD4-210ENST00000545021 LRSAM1Q6UWE0 723 aa23.66■■□□□ 1.38
LYSMD4-210ENST00000545021 CHMP4BQ9H444 224 aaKnown RBP23.66■■□□□ 1.38
LYSMD4-210ENST00000545021 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
LYSMD4-210ENST00000545021 MYOM1P52179 1685 aa23.65■■□□□ 1.38
LYSMD4-210ENST00000545021 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
LYSMD4-210ENST00000545021 CYP2E1P05181 493 aaPredicted RBP23.64■■□□□ 1.37
LYSMD4-210ENST00000545021 AHDC1Q5TGY3 1603 aaPredicted RBP23.64■■□□□ 1.37
LYSMD4-210ENST00000545021 DLC1Q96QB1 1528 aa23.64■■□□□ 1.37
LYSMD4-210ENST00000545021 WDR63Q8IWG1 891 aa23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 ZKSCAN2Q63HK3 967 aa23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 DZIP1LQ8IYY4 767 aaKnown RBP23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 BCL2L13Q9BXK5 485 aa23.63■■□□□ 1.37
LYSMD4-210ENST00000545021 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
LYSMD4-210ENST00000545021 C19orf44Q9H6X5 657 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms