RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	OVOS2	Q6IE36	1432 aa		18.79	■□□□□ 0.6
POLE-222	ENST00000545015		A0A0G2JS52	829 aa		18.78	■□□□□ 0.6
POLE-222	ENST00000545015	MYT1	Q01538	1121 aa		18.78	■□□□□ 0.6
POLE-222	ENST00000545015	AXIN2	Q9Y2T1	843 aa		18.78	■□□□□ 0.6
POLE-222	ENST00000545015	ZRANB1	Q9UGI0	708 aa		18.77	■□□□□ 0.6
POLE-222	ENST00000545015	WDR17	Q8IZU2	1322 aa		18.76	■□□□□ 0.59
POLE-222	ENST00000545015	USP35	Q9P2H5	1018 aa		18.74	■□□□□ 0.59
POLE-222	ENST00000545015	ZBTB7C	A1YPR0	619 aa		18.73	■□□□□ 0.59
POLE-222	ENST00000545015	SF3B2	Q13435	895 aa	Known RBP	18.72	■□□□□ 0.59
POLE-222	ENST00000545015	CARD10	Q9BWT7	1032 aa		18.72	■□□□□ 0.59
POLE-222	ENST00000545015	PARP4	Q9UKK3	1724 aa	Known RBP	18.71	■□□□□ 0.59
POLE-222	ENST00000545015	SOX12	O15370	315 aa		18.71	■□□□□ 0.59
POLE-222	ENST00000545015	FAM196A	Q6ZSG2	479 aa		18.71	■□□□□ 0.59
POLE-222	ENST00000545015	TOM1L2	Q6ZVM7	507 aa		18.71	■□□□□ 0.59
POLE-222	ENST00000545015	DISP2	A7MBM2	1401 aa		18.71	■□□□□ 0.59
POLE-222	ENST00000545015	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.7	■□□□□ 0.58
POLE-222	ENST00000545015	C11orf95	C9JLR9	678 aa	Predicted RBP	18.69	■□□□□ 0.58
POLE-222	ENST00000545015	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
POLE-222	ENST00000545015	PDE3B	Q13370	1112 aa		18.69	■□□□□ 0.58
POLE-222	ENST00000545015	COG3	Q96JB2	828 aa		18.69	■□□□□ 0.58
POLE-222	ENST00000545015	ERBB3	P21860	1342 aa		18.69	■□□□□ 0.58
POLE-222	ENST00000545015	CCDC7	Q96M83	1385 aa		18.68	■□□□□ 0.58
POLE-222	ENST00000545015	FYB1	O15117	783 aa		18.67	■□□□□ 0.58
POLE-222	ENST00000545015	FAM182B	Q5T319	152 aa		18.67	■□□□□ 0.58
POLE-222	ENST00000545015	DEFB132	Q7Z7B7	95 aa		18.67	■□□□□ 0.58
POLE-222	ENST00000545015	MYOM1	P52179	1685 aa		18.66	■□□□□ 0.58
POLE-222	ENST00000545015	RGPD1	P0DJD0	1748 aa		18.66	■□□□□ 0.58
POLE-222	ENST00000545015	BAG6	P46379	1132 aa		18.66	■□□□□ 0.58
POLE-222	ENST00000545015	IP6K1	Q92551	441 aa		18.66	■□□□□ 0.58
POLE-222	ENST00000545015	RGPD5	Q99666	1765 aa		18.65	■□□□□ 0.58
POLE-222	ENST00000545015	CSB-PGBD3	P0DP91	1061 aa		18.65	■□□□□ 0.58
POLE-222	ENST00000545015	LTN1	O94822	1766 aa		18.65	■□□□□ 0.58
POLE-222	ENST00000545015	BCL9	O00512	1426 aa		18.65	■□□□□ 0.58
POLE-222	ENST00000545015	LRRC37A3	O60309	1634 aa		18.64	■□□□□ 0.57
POLE-222	ENST00000545015	HSPA5	P11021	654 aa	Known RBP	18.64	■□□□□ 0.57
POLE-222	ENST00000545015	DDB1	Q16531	1140 aa		18.64	■□□□□ 0.57
POLE-222	ENST00000545015	CARD14	Q9BXL6	1004 aa		18.64	■□□□□ 0.57
POLE-222	ENST00000545015	WNK3	Q9BYP7	1800 aa		18.63	■□□□□ 0.57
POLE-222	ENST00000545015	MAP3K19	Q56UN5	1328 aa		18.63	■□□□□ 0.57
POLE-222	ENST00000545015	OVOS2	A0A0G2JMS6	1433 aa		18.63	■□□□□ 0.57
POLE-222	ENST00000545015	TNS1	Q9HBL0	1735 aa	Known RBP	18.63	■□□□□ 0.57
POLE-222	ENST00000545015	ANKRD24	Q8TF21	1146 aa		18.62	■□□□□ 0.57
POLE-222	ENST00000545015	RTL1	A6NKG5	1358 aa		18.62	■□□□□ 0.57
POLE-222	ENST00000545015	PEAK1	Q9H792	1746 aa		18.62	■□□□□ 0.57
POLE-222	ENST00000545015	NSD3	Q9BZ95	1437 aa		18.6	■□□□□ 0.57
POLE-222	ENST00000545015	KIF24	Q5T7B8	1368 aa		18.6	■□□□□ 0.57
POLE-222	ENST00000545015	PARD3	Q8TEW0	1356 aa		18.6	■□□□□ 0.57
POLE-222	ENST00000545015	TRIM37	O94972	964 aa		18.6	■□□□□ 0.57
POLE-222	ENST00000545015	GGNBP2	Q9H3C7	697 aa		18.6	■□□□□ 0.57
POLE-222	ENST00000545015	HOXC9	P31274	260 aa		18.59	■□□□□ 0.57
POLE-222	ENST00000545015	TNS2	Q63HR2	1409 aa		18.58	■□□□□ 0.57
POLE-222	ENST00000545015	EN1	Q05925	392 aa	Predicted RBP	18.58	■□□□□ 0.56
POLE-222	ENST00000545015	MARCH10	Q8NA82	808 aa	Predicted RBP	18.58	■□□□□ 0.56
POLE-222	ENST00000545015	CAMKK2	Q96RR4	588 aa		18.58	■□□□□ 0.56
POLE-222	ENST00000545015	NLRP2	Q9NX02	1062 aa		18.58	■□□□□ 0.56
POLE-222	ENST00000545015	FAM208A	Q9UK61	1670 aa	Known RBP	18.57	■□□□□ 0.56
POLE-222	ENST00000545015	EXOC5	O00471	708 aa		18.57	■□□□□ 0.56
POLE-222	ENST00000545015	AMPH	P49418	695 aa		18.57	■□□□□ 0.56
POLE-222	ENST00000545015	KIF20B	Q96Q89	1820 aa		18.56	■□□□□ 0.56
POLE-222	ENST00000545015	IL2RB	P14784	551 aa		18.56	■□□□□ 0.56
POLE-222	ENST00000545015	FBLN1	P23142	703 aa		18.56	■□□□□ 0.56
POLE-222	ENST00000545015	CGNL1	Q0VF96	1302 aa		18.55	■□□□□ 0.56
POLE-222	ENST00000545015	APBA3	O96018	575 aa		18.55	■□□□□ 0.56
POLE-222	ENST00000545015	RRS1	Q15050	365 aa	Known RBP	18.53	■□□□□ 0.56
POLE-222	ENST00000545015	EZH2	Q15910	746 aa	Known RBP	18.53	■□□□□ 0.56
POLE-222	ENST00000545015	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.53	■□□□□ 0.56
POLE-222	ENST00000545015	INSR	P06213	1382 aa		18.53	■□□□□ 0.56
POLE-222	ENST00000545015	FLT4	P35916	1363 aa		18.53	■□□□□ 0.56
POLE-222	ENST00000545015	PLSCR1	O15162	318 aa		18.51	■□□□□ 0.55
POLE-222	ENST00000545015	SBF2	Q86WG5	1849 aa		18.51	■□□□□ 0.55
POLE-222	ENST00000545015	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.5	■□□□□ 0.55
POLE-222	ENST00000545015	RGPD4	Q7Z3J3	1758 aa		18.5	■□□□□ 0.55
POLE-222	ENST00000545015	LTV1	Q96GA3	475 aa	Predicted RBP	18.49	■□□□□ 0.55
POLE-222	ENST00000545015	PANK3	Q9H999	370 aa		18.49	■□□□□ 0.55
POLE-222	ENST00000545015	NSD2	O96028	1365 aa		18.49	■□□□□ 0.55
POLE-222	ENST00000545015	RREB1	Q92766	1687 aa		18.49	■□□□□ 0.55
POLE-222	ENST00000545015	SMG6	Q86US8	1419 aa	Known RBP	18.49	■□□□□ 0.55
POLE-222	ENST00000545015	HSP90AB2P	Q58FF8	381 aa		18.48	■□□□□ 0.55
POLE-222	ENST00000545015	POLR3GL	Q9BT43	218 aa		18.48	■□□□□ 0.55
POLE-222	ENST00000545015	ANKRD26	Q9UPS8	1709 aa		18.48	■□□□□ 0.55
POLE-222	ENST00000545015	NBPF6	Q5VWK0	638 aa		18.47	■□□□□ 0.55
POLE-222	ENST00000545015	NBPF4	Q96M43	638 aa		18.47	■□□□□ 0.55
POLE-222	ENST00000545015	SRCAP	Q6ZRS2	3230 aa		18.47	■□□□□ 0.55
POLE-222	ENST00000545015	WASHC2A	Q641Q2	1341 aa		18.47	■□□□□ 0.55
POLE-222	ENST00000545015	EMILIN1	Q9Y6C2	1016 aa		18.46	■□□□□ 0.55
POLE-222	ENST00000545015	NCAPD2	Q15021	1401 aa		18.46	■□□□□ 0.55
POLE-222	ENST00000545015	PTF1A	Q7RTS3	328 aa		18.45	■□□□□ 0.54
POLE-222	ENST00000545015	POLK	Q9UBT6	870 aa		18.45	■□□□□ 0.54
POLE-222	ENST00000545015	KIF7	Q2M1P5	1343 aa		18.45	■□□□□ 0.54
POLE-222	ENST00000545015	NHS	Q6T4R5	1651 aa		18.44	■□□□□ 0.54
POLE-222	ENST00000545015	MEGF6	O75095	1541 aa		18.44	■□□□□ 0.54
POLE-222	ENST00000545015	NUP188	Q5SRE5	1749 aa		18.43	■□□□□ 0.54
POLE-222	ENST00000545015	ZCRB1	Q8TBF4	217 aa	Known RBP	18.42	■□□□□ 0.54
POLE-222	ENST00000545015	RGPD2	P0DJD1	1756 aa		18.41	■□□□□ 0.54
POLE-222	ENST00000545015	PSD	A5PKW4	1024 aa	Predicted RBP	18.41	■□□□□ 0.54
POLE-222	ENST00000545015	KCNQ2	O43526	872 aa		18.41	■□□□□ 0.54
POLE-222	ENST00000545015	R3HDM1	Q15032	1099 aa	Known RBP	18.41	■□□□□ 0.54
POLE-222	ENST00000545015	NBPF14	Q5TI25	921 aa		18.41	■□□□□ 0.54
POLE-222	ENST00000545015	PROM2	Q8N271	834 aa		18.41	■□□□□ 0.54
POLE-222	ENST00000545015	RAPGEF4	Q8WZA2	1011 aa		18.4	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms