RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 NCAPD2Q15021 1401 aa9.34□□□□□ -0.91
HMGCS2-204ENST00000544913 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
HMGCS2-204ENST00000544913 LMO7Q8WWI1 1683 aa9.34□□□□□ -0.91
HMGCS2-204ENST00000544913 CAMTA1Q9Y6Y1 1673 aa9.34□□□□□ -0.91
HMGCS2-204ENST00000544913 ABCC6O95255 1503 aa9.34□□□□□ -0.91
HMGCS2-204ENST00000544913 DIAPH1O60610 1272 aaKnown RBP9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 CFAP53Q96M91 514 aa9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 PLEKHF1Q96S99 279 aa9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 PHLPP1O60346 1717 aa9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 PPM1GO15355 546 aaPredicted RBP9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 HNRNPUQ00839 825 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 AXIN2Q9Y2T1 843 aa9.33□□□□□ -0.92
HMGCS2-204ENST00000544913 KDRP35968 1356 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 TOM1O60784 492 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 WDR43Q15061 677 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 ERICH6BQ5W0A0 696 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 CCDC146Q8IYE0 955 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 IP6K1Q92551 441 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 ZBED9Q6R2W3 1325 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 ZNF521Q96K83 1311 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
HMGCS2-204ENST00000544913 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
HMGCS2-204ENST00000544913 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
HMGCS2-204ENST00000544913 IGSF1Q8N6C5 1336 aa9.31□□□□□ -0.92
HMGCS2-204ENST00000544913 KIAA0232Q92628 1395 aa9.31□□□□□ -0.92
HMGCS2-204ENST00000544913 RGPD2P0DJD1 1756 aa9.31□□□□□ -0.92
HMGCS2-204ENST00000544913 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
HMGCS2-204ENST00000544913 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
HMGCS2-204ENST00000544913 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.92
HMGCS2-204ENST00000544913 FAM208AQ9UK61 1670 aaKnown RBP9.3□□□□□ -0.92
HMGCS2-204ENST00000544913 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 AMPHP49418 695 aa9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 EYA1Q99502 592 aa9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 APAF1O14727 1248 aa9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 LRRC59Q96AG4 307 aaKnown RBP9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
HMGCS2-204ENST00000544913 ERBB3P21860 1342 aa9.28□□□□□ -0.92
HMGCS2-204ENST00000544913 FCHSD2O94868 740 aa9.28□□□□□ -0.92
HMGCS2-204ENST00000544913 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
HMGCS2-204ENST00000544913 RUNDC1Q96C34 613 aa9.28□□□□□ -0.92
HMGCS2-204ENST00000544913 HMOX1P09601 288 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 CHRNA2Q15822 529 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 NUDCQ9Y266 331 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 COL5A2P05997 1499 aaPredicted RBP9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 PRKAR2BP31323 418 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 TCP11L2Q8N4U5 519 aa9.27□□□□□ -0.93
HMGCS2-204ENST00000544913 FAM83GA6ND36 823 aa9.26□□□□□ -0.93
HMGCS2-204ENST00000544913 FKBP8Q14318 412 aa9.26□□□□□ -0.93
HMGCS2-204ENST00000544913 SULT6B1Q6IMI4 303 aa9.26□□□□□ -0.93
HMGCS2-204ENST00000544913 ANKRD24Q8TF21 1146 aa9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 LRP6O75581 1613 aa9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 COL14A1Q05707 1796 aaKnown RBP9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 NCBP3Q53F19 620 aaKnown RBP9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 USHBP1Q8N6Y0 703 aa9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 LTV1Q96GA3 475 aaPredicted RBP9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 SPINK5Q9NQ38 1064 aaPredicted RBP9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 RRP7AQ9Y3A4 280 aaKnown RBP9.25□□□□□ -0.93
HMGCS2-204ENST00000544913 DLG5Q8TDM6 1919 aa9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 NRAPQ86VF7 1730 aa9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 TMPOP42166 694 aaKnown RBP9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 CDCA7LQ96GN5 454 aa9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 PRDM11Q9NQV5 511 aa9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 MEGF6O75095 1541 aa9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 PLCH1Q4KWH8 1693 aa9.24□□□□□ -0.93
HMGCS2-204ENST00000544913 ZBTB7CA1YPR0 619 aa9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 HSPA1LP34931 641 aa9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 CCDC27Q2M243 656 aa9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 WWC1Q8IX03 1113 aa9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 SALL2Q9Y467 1007 aaPredicted RBP9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 JCADQ9P266 1359 aa9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 TRMT2AQ8IZ69 625 aaKnown RBP9.23□□□□□ -0.93
HMGCS2-204ENST00000544913 SLIT2O94813 1529 aa9.22□□□□□ -0.93
HMGCS2-204ENST00000544913 PRKCSHP14314 528 aaPredicted RBP9.22□□□□□ -0.93
HMGCS2-204ENST00000544913 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
HMGCS2-204ENST00000544913 NGEFQ8N5V2 710 aa9.22□□□□□ -0.93
HMGCS2-204ENST00000544913 LRRC37A3O60309 1634 aa9.22□□□□□ -0.93
HMGCS2-204ENST00000544913 WDR17Q8IZU2 1322 aa9.22□□□□□ -0.93
HMGCS2-204ENST00000544913 PKD1L3Q7Z443 1732 aa9.21□□□□□ -0.94
HMGCS2-204ENST00000544913 MTHFSDQ2M296 383 aaKnown RBP9.21□□□□□ -0.94
HMGCS2-204ENST00000544913 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.94
HMGCS2-204ENST00000544913 MAPK8IP3Q9UPT6 1336 aa9.2□□□□□ -0.94
HMGCS2-204ENST00000544913 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
HMGCS2-204ENST00000544913 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
HMGCS2-204ENST00000544913 SHANK3Q9BYB0 1731 aa9.2□□□□□ -0.94
HMGCS2-204ENST00000544913 NWD2Q9ULI1 1742 aa9.2□□□□□ -0.94
HMGCS2-204ENST00000544913 DISP2A7MBM2 1401 aa9.2□□□□□ -0.94
HMGCS2-204ENST00000544913 SLFN5Q08AF3 891 aa9.19□□□□□ -0.94
HMGCS2-204ENST00000544913 PDE3BQ13370 1112 aa9.19□□□□□ -0.94
HMGCS2-204ENST00000544913 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
HMGCS2-204ENST00000544913 OVOS2A0A0G2JMS6 1433 aa9.19□□□□□ -0.94
HMGCS2-204ENST00000544913 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms