RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 LRRN4Q8WUT4 740 aa8.07□□□□□ -1.12
CCDC170-203ENST00000544131 DNMT3LQ9UJW3 386 aa8.07□□□□□ -1.12
CCDC170-203ENST00000544131 SOS2Q07890 1332 aaPredicted RBP8.05□□□□□ -1.12
CCDC170-203ENST00000544131 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
CCDC170-203ENST00000544131 ARMC2Q8NEN0 867 aa8.05□□□□□ -1.12
CCDC170-203ENST00000544131 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
CCDC170-203ENST00000544131 MAP4K5Q9Y4K4 846 aa8.05□□□□□ -1.12
CCDC170-203ENST00000544131 RFC5P40937 340 aa8.04□□□□□ -1.12
CCDC170-203ENST00000544131 NBPF14Q5TI25 921 aa8.04□□□□□ -1.12
CCDC170-203ENST00000544131 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
CCDC170-203ENST00000544131 MAGEB6P1A0A0J9YX57 407 aa8.03□□□□□ -1.12
CCDC170-203ENST00000544131 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
CCDC170-203ENST00000544131 NR6A1Q15406 480 aa8.03□□□□□ -1.12
CCDC170-203ENST00000544131 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
CCDC170-203ENST00000544131 TRMT44Q8IYL2 757 aaKnown RBP8.03□□□□□ -1.12
CCDC170-203ENST00000544131 TSEN34Q9BSV6 310 aaKnown RBP8.03□□□□□ -1.12
CCDC170-203ENST00000544131 KRTAP4-6Q9BYQ5 205 aa8.03□□□□□ -1.12
CCDC170-203ENST00000544131 EMILIN1Q9Y6C2 1016 aa8.02□□□□□ -1.13
CCDC170-203ENST00000544131 USP17L8P0C7I0 530 aa8.01□□□□□ -1.13
CCDC170-203ENST00000544131 GSK3AP49840 483 aa8.01□□□□□ -1.13
CCDC170-203ENST00000544131 KRT76Q01546 638 aa8.01□□□□□ -1.13
CCDC170-203ENST00000544131 KCNMA1Q12791 1236 aa8.01□□□□□ -1.13
CCDC170-203ENST00000544131 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
CCDC170-203ENST00000544131 CARD14Q9BXL6 1004 aa8.01□□□□□ -1.13
CCDC170-203ENST00000544131 TTLL8A6PVC2 850 aa8□□□□□ -1.13
CCDC170-203ENST00000544131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
CCDC170-203ENST00000544131 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
CCDC170-203ENST00000544131 PTSQ03393 145 aa7.99□□□□□ -1.13
CCDC170-203ENST00000544131 EPS8L1Q8TE68 723 aa7.99□□□□□ -1.13
CCDC170-203ENST00000544131 FKBPLQ9UIM3 349 aa7.99□□□□□ -1.13
CCDC170-203ENST00000544131 ERFEQ4G0M1 354 aa7.98□□□□□ -1.13
CCDC170-203ENST00000544131 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
CCDC170-203ENST00000544131 CNTNAP3BQ96NU0 1288 aa7.98□□□□□ -1.13
CCDC170-203ENST00000544131 CNTNAP3Q9BZ76 1288 aa7.98□□□□□ -1.13
CCDC170-203ENST00000544131 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
CCDC170-203ENST00000544131 CBLBQ13191 982 aa7.97□□□□□ -1.13
CCDC170-203ENST00000544131 PPP1R26Q5T8A7 1209 aaPredicted RBP7.97□□□□□ -1.13
CCDC170-203ENST00000544131 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
CCDC170-203ENST00000544131 GPKOWQ92917 476 aaPredicted RBP eCLIP7.97□□□□□ -1.13
CCDC170-203ENST00000544131 FIGNL2A6NMB9 653 aa7.96□□□□□ -1.14
CCDC170-203ENST00000544131 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
CCDC170-203ENST00000544131 SPINT1O43278 529 aa7.95□□□□□ -1.14
CCDC170-203ENST00000544131 SUZ12Q15022 739 aaKnown RBP7.95□□□□□ -1.14
CCDC170-203ENST00000544131 Q6ZVU0 165 aa7.95□□□□□ -1.14
CCDC170-203ENST00000544131 ARHGAP9Q9BRR9 750 aa7.95□□□□□ -1.14
CCDC170-203ENST00000544131 COL25A1Q9BXS0 654 aaPredicted RBP7.95□□□□□ -1.14
CCDC170-203ENST00000544131 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
CCDC170-203ENST00000544131 ZBTB33Q86T24 672 aa7.94□□□□□ -1.14
CCDC170-203ENST00000544131 CCDC155Q8N6L0 562 aa7.94□□□□□ -1.14
CCDC170-203ENST00000544131 PNMA1Q8ND90 353 aa7.94□□□□□ -1.14
CCDC170-203ENST00000544131 NANOS1Q8WY41 292 aaKnown RBP7.94□□□□□ -1.14
CCDC170-203ENST00000544131 ADAMTS8Q9UP79 889 aa7.94□□□□□ -1.14
CCDC170-203ENST00000544131 RASSF7Q02833 373 aa7.93□□□□□ -1.14
CCDC170-203ENST00000544131 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
CCDC170-203ENST00000544131 TMEM151AQ8N4L1 468 aa7.93□□□□□ -1.14
CCDC170-203ENST00000544131 SLC10A4Q96EP9 437 aa7.93□□□□□ -1.14
CCDC170-203ENST00000544131 RNF225M0QZC1 329 aaPredicted RBP7.92□□□□□ -1.14
CCDC170-203ENST00000544131 GDF11O95390 407 aa7.92□□□□□ -1.14
CCDC170-203ENST00000544131 PTK2Q05397 1052 aa7.92□□□□□ -1.14
CCDC170-203ENST00000544131 KCTD15Q96SI1 283 aaPredicted RBP7.92□□□□□ -1.14
CCDC170-203ENST00000544131 TRIM34Q9BYJ4 488 aa7.92□□□□□ -1.14
CCDC170-203ENST00000544131 ZC3H4Q9UPT8 1303 aaKnown RBP7.92□□□□□ -1.14
CCDC170-203ENST00000544131 ZNF385CQ66K41 422 aaPredicted RBP7.91□□□□□ -1.14
CCDC170-203ENST00000544131 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
CCDC170-203ENST00000544131 SLC35F4A4IF30 521 aa7.9□□□□□ -1.14
CCDC170-203ENST00000544131 ITGA6P23229 1130 aa7.9□□□□□ -1.14
CCDC170-203ENST00000544131 SVOPQ8N4V2 548 aa7.9□□□□□ -1.14
CCDC170-203ENST00000544131 OCSTAMPQ9BR26 566 aa7.9□□□□□ -1.14
CCDC170-203ENST00000544131 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.14
CCDC170-203ENST00000544131 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
CCDC170-203ENST00000544131 RELBQ01201 579 aa7.89□□□□□ -1.15
CCDC170-203ENST00000544131 DHX9Q08211 1270 aaKnown RBP7.89□□□□□ -1.15
CCDC170-203ENST00000544131 INTS6LQ5JSJ4 861 aaKnown RBP7.89□□□□□ -1.15
CCDC170-203ENST00000544131 ADAM32Q8TC27 787 aa7.89□□□□□ -1.15
CCDC170-203ENST00000544131 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
CCDC170-203ENST00000544131 CDC14CA4D256 554 aa7.88□□□□□ -1.15
CCDC170-203ENST00000544131 VWA5B2Q8N398 1253 aa7.88□□□□□ -1.15
CCDC170-203ENST00000544131 BANK1Q8NDB2 785 aa7.88□□□□□ -1.15
CCDC170-203ENST00000544131 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
CCDC170-203ENST00000544131 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
CCDC170-203ENST00000544131 SNRKQ9NRH2 765 aa7.88□□□□□ -1.15
CCDC170-203ENST00000544131 GPSM3Q9Y4H4 160 aa7.88□□□□□ -1.15
CCDC170-203ENST00000544131 SLURP2P0DP57 97 aa7.87□□□□□ -1.15
CCDC170-203ENST00000544131 SV2AQ7L0J3 742 aa7.86□□□□□ -1.15
CCDC170-203ENST00000544131 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
CCDC170-203ENST00000544131 RNF217Q8TC41 542 aa7.86□□□□□ -1.15
CCDC170-203ENST00000544131 POLMQ9NP87 494 aaPredicted RBP7.86□□□□□ -1.15
CCDC170-203ENST00000544131 SENP3-EIF4A1A0A087X0R7 540 aa7.85□□□□□ -1.15
CCDC170-203ENST00000544131 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
CCDC170-203ENST00000544131 ARHGEF15O94989 841 aa7.84□□□□□ -1.15
CCDC170-203ENST00000544131 IRS1P35568 1242 aa7.84□□□□□ -1.15
CCDC170-203ENST00000544131 RAB15P59190 212 aa7.84□□□□□ -1.15
CCDC170-203ENST00000544131 MTMR14Q8NCE2 650 aa7.84□□□□□ -1.15
CCDC170-203ENST00000544131 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
CCDC170-203ENST00000544131 TMPRSS4Q9NRS4 437 aa7.83□□□□□ -1.16
CCDC170-203ENST00000544131 ADAMTS2O95450 1211 aa7.82□□□□□ -1.16
CCDC170-203ENST00000544131 FBXO45P0C2W1 286 aa7.82□□□□□ -1.16
CCDC170-203ENST00000544131 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
CCDC170-203ENST00000544131 FOXD4L5Q5VV16 416 aaPredicted RBP7.82□□□□□ -1.16
CCDC170-203ENST00000544131 ZNF784Q8NCA9 323 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms