RNA–Protein interactions for RNA: ENST00000544018.6

LRCOL1-203, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-203ENST00000544018 EN1Q05925 392 aaPredicted RBP23.57■■□□□ 1.36
LRCOL1-203ENST00000544018 PARD3Q8TEW0 1356 aa23.56■■□□□ 1.36
LRCOL1-203ENST00000544018 ABCC6O95255 1503 aa23.56■■□□□ 1.36
LRCOL1-203ENST00000544018 EDC4Q6P2E9 1401 aaKnown RBP23.56■■□□□ 1.36
LRCOL1-203ENST00000544018 TNS1Q9HBL0 1735 aaKnown RBP23.56■■□□□ 1.36
LRCOL1-203ENST00000544018 COL18A1P39060 1754 aa23.55■■□□□ 1.36
LRCOL1-203ENST00000544018 USP31Q70CQ4 1352 aa23.55■■□□□ 1.36
LRCOL1-203ENST00000544018 APBA3O96018 575 aa23.55■■□□□ 1.36
LRCOL1-203ENST00000544018 DDB1Q16531 1140 aa23.55■■□□□ 1.36
LRCOL1-203ENST00000544018 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
LRCOL1-203ENST00000544018 ST20-MTHFSA0A0A6YYL1 179 aa23.54■■□□□ 1.36
LRCOL1-203ENST00000544018 TIMELESSQ9UNS1 1208 aa23.53■■□□□ 1.36
LRCOL1-203ENST00000544018 OVOS2A0A0G2JMS6 1433 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 OVOS2A0A0J9YW53 1432 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 OVOS2Q6IE36 1432 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 NFAT5O94916 1531 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 TMF1P82094 1093 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 CARD10Q9BWT7 1032 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 AXIN2Q9Y2T1 843 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
LRCOL1-203ENST00000544018 CD163L1Q9NR16 1453 aa23.5■■□□□ 1.35
LRCOL1-203ENST00000544018 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
LRCOL1-203ENST00000544018 CDCA8Q53HL2 280 aa23.5■■□□□ 1.35
LRCOL1-203ENST00000544018 NME9Q86XW9 330 aa23.5■■□□□ 1.35
LRCOL1-203ENST00000544018 A0A1W2PP64 1363 aa23.5■■□□□ 1.35
LRCOL1-203ENST00000544018 TESK2Q96S53 571 aa23.49■■□□□ 1.35
LRCOL1-203ENST00000544018 EZH2Q15910 746 aaKnown RBP23.48■■□□□ 1.35
LRCOL1-203ENST00000544018 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
LRCOL1-203ENST00000544018 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
LRCOL1-203ENST00000544018 USP47Q96K76 1375 aa23.47■■□□□ 1.35
LRCOL1-203ENST00000544018 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
LRCOL1-203ENST00000544018 PSDA5PKW4 1024 aaPredicted RBP23.46■■□□□ 1.35
LRCOL1-203ENST00000544018 LTN1O94822 1766 aa23.46■■□□□ 1.35
LRCOL1-203ENST00000544018 CAMKK2Q96RR4 588 aa23.46■■□□□ 1.35
LRCOL1-203ENST00000544018 EXOC5O00471 708 aa23.45■■□□□ 1.34
LRCOL1-203ENST00000544018 COG3Q96JB2 828 aa23.45■■□□□ 1.34
LRCOL1-203ENST00000544018 PCGF6Q9BYE7 350 aa23.44■■□□□ 1.34
LRCOL1-203ENST00000544018 NLRP2Q9NX02 1062 aa23.43■■□□□ 1.34
LRCOL1-203ENST00000544018 LRP5O75197 1615 aa23.42■■□□□ 1.34
LRCOL1-203ENST00000544018 R3HDM1Q15032 1099 aaKnown RBP23.42■■□□□ 1.34
LRCOL1-203ENST00000544018 ANKRD36BQ8N2N9 1353 aa23.41■■□□□ 1.34
LRCOL1-203ENST00000544018 ERBB3P21860 1342 aa23.41■■□□□ 1.34
LRCOL1-203ENST00000544018 PEAK1Q9H792 1746 aa23.39■■□□□ 1.34
LRCOL1-203ENST00000544018 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
LRCOL1-203ENST00000544018 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
LRCOL1-203ENST00000544018 ANKRD24Q8TF21 1146 aa23.38■■□□□ 1.33
LRCOL1-203ENST00000544018 BCL9O00512 1426 aa23.38■■□□□ 1.33
LRCOL1-203ENST00000544018 RREB1Q92766 1687 aa23.38■■□□□ 1.33
LRCOL1-203ENST00000544018 IL2RBP14784 551 aa23.37■■□□□ 1.33
LRCOL1-203ENST00000544018 RGPD3A6NKT7 1758 aaPredicted RBP23.37■■□□□ 1.33
LRCOL1-203ENST00000544018 RGPD4Q7Z3J3 1758 aa23.37■■□□□ 1.33
LRCOL1-203ENST00000544018 TNS2Q63HR2 1409 aa23.36■■□□□ 1.33
LRCOL1-203ENST00000544018 PLSCR1O15162 318 aa23.36■■□□□ 1.33
LRCOL1-203ENST00000544018 MARCH10Q8NA82 808 aaPredicted RBP23.36■■□□□ 1.33
LRCOL1-203ENST00000544018 IP6K1Q92551 441 aa23.36■■□□□ 1.33
LRCOL1-203ENST00000544018 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
LRCOL1-203ENST00000544018 AMPHP49418 695 aa23.35■■□□□ 1.33
LRCOL1-203ENST00000544018 NUP188Q5SRE5 1749 aa23.34■■□□□ 1.33
LRCOL1-203ENST00000544018 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
LRCOL1-203ENST00000544018 MAP3K19Q56UN5 1328 aa23.29■■□□□ 1.32
LRCOL1-203ENST00000544018 RTL1A6NKG5 1358 aa23.28■■□□□ 1.32
LRCOL1-203ENST00000544018 SMG6Q86US8 1419 aaKnown RBP23.28■■□□□ 1.32
LRCOL1-203ENST00000544018 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
LRCOL1-203ENST00000544018 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
LRCOL1-203ENST00000544018 HOXC9P31274 260 aa23.27■■□□□ 1.32
LRCOL1-203ENST00000544018 KIF20BQ96Q89 1820 aa23.26■■□□□ 1.31
LRCOL1-203ENST00000544018 FYB1O15117 783 aa23.26■■□□□ 1.31
LRCOL1-203ENST00000544018 GGNBP2Q9H3C7 697 aa23.26■■□□□ 1.31
LRCOL1-203ENST00000544018 SRCAPQ6ZRS2 3230 aa23.25■■□□□ 1.31
LRCOL1-203ENST00000544018 NHSQ6T4R5 1651 aa23.23■■□□□ 1.31
LRCOL1-203ENST00000544018 SPON1Q9HCB6 807 aa23.22■■□□□ 1.31
LRCOL1-203ENST00000544018 EIF4G2P78344 907 aaKnown RBP eCLIP23.21■■□□□ 1.31
LRCOL1-203ENST00000544018 TXNRD1Q16881 649 aa23.21■■□□□ 1.31
LRCOL1-203ENST00000544018 STK32BQ9NY57 414 aa23.21■■□□□ 1.31
LRCOL1-203ENST00000544018 KIF24Q5T7B8 1368 aa23.21■■□□□ 1.31
LRCOL1-203ENST00000544018 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
LRCOL1-203ENST00000544018 ACSBG1Q96GR2 724 aa23.2■■□□□ 1.3
LRCOL1-203ENST00000544018 PPP1R1BQ9UD71 204 aaPredicted RBP23.2■■□□□ 1.3
LRCOL1-203ENST00000544018 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
LRCOL1-203ENST00000544018 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
LRCOL1-203ENST00000544018 NSD3Q9BZ95 1437 aa23.18■■□□□ 1.3
LRCOL1-203ENST00000544018 KCNQ2O43526 872 aa23.18■■□□□ 1.3
LRCOL1-203ENST00000544018 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
LRCOL1-203ENST00000544018 RAPGEF4Q8WZA2 1011 aa23.18■■□□□ 1.3
LRCOL1-203ENST00000544018 POLR3GLQ9BT43 218 aa23.18■■□□□ 1.3
LRCOL1-203ENST00000544018 FLT4P35916 1363 aa23.17■■□□□ 1.3
LRCOL1-203ENST00000544018 MYOM1P52179 1685 aa23.17■■□□□ 1.3
LRCOL1-203ENST00000544018 FBLN1P23142 703 aa23.16■■□□□ 1.3
LRCOL1-203ENST00000544018 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
LRCOL1-203ENST00000544018 INSRP06213 1382 aa23.15■■□□□ 1.3
LRCOL1-203ENST00000544018 DCAF8L1A6NGE4 600 aa23.14■■□□□ 1.29
LRCOL1-203ENST00000544018 BTAF1O14981 1849 aa23.14■■□□□ 1.29
LRCOL1-203ENST00000544018 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
LRCOL1-203ENST00000544018 PROM2Q8N271 834 aa23.13■■□□□ 1.29
LRCOL1-203ENST00000544018 CARD14Q9BXL6 1004 aa23.13■■□□□ 1.29
LRCOL1-203ENST00000544018 RGPD2P0DJD1 1756 aa23.13■■□□□ 1.29
LRCOL1-203ENST00000544018 SLC15A2Q16348 729 aa23.12■■□□□ 1.29
LRCOL1-203ENST00000544018 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms