RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 DCAF11Q8TEB1 546 aa16.65■□□□□ 0.26
AP000439.1-201ENST00000544004 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
AP000439.1-201ENST00000544004 WNK3Q9BYP7 1800 aa16.64■□□□□ 0.25
AP000439.1-201ENST00000544004 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
AP000439.1-201ENST00000544004 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
AP000439.1-201ENST00000544004 TOM1L2Q6ZVM7 507 aa16.63■□□□□ 0.25
AP000439.1-201ENST00000544004 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
AP000439.1-201ENST00000544004 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
AP000439.1-201ENST00000544004 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
AP000439.1-201ENST00000544004 BCL9O00512 1426 aa16.61■□□□□ 0.25
AP000439.1-201ENST00000544004 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
AP000439.1-201ENST00000544004 ARXQ96QS3 562 aa16.59■□□□□ 0.25
AP000439.1-201ENST00000544004 COL18A1P39060 1754 aa16.59■□□□□ 0.25
AP000439.1-201ENST00000544004 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
AP000439.1-201ENST00000544004 STAC3Q96MF2 364 aa16.58■□□□□ 0.24
AP000439.1-201ENST00000544004 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
AP000439.1-201ENST00000544004 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
AP000439.1-201ENST00000544004 CDCA7Q9BWT1 371 aaPredicted RBP16.57■□□□□ 0.24
AP000439.1-201ENST00000544004 SLIT3O75094 1523 aa16.56■□□□□ 0.24
AP000439.1-201ENST00000544004 NLRP6P59044 892 aa16.56■□□□□ 0.24
AP000439.1-201ENST00000544004 GPR162Q16538 588 aa16.56■□□□□ 0.24
AP000439.1-201ENST00000544004 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
AP000439.1-201ENST00000544004 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
AP000439.1-201ENST00000544004 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
AP000439.1-201ENST00000544004 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
AP000439.1-201ENST00000544004 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
AP000439.1-201ENST00000544004 EXOC5O00471 708 aa16.53■□□□□ 0.24
AP000439.1-201ENST00000544004 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
AP000439.1-201ENST00000544004 CABP2Q9NPB3 220 aa16.52■□□□□ 0.24
AP000439.1-201ENST00000544004 USP6P35125 1406 aa16.52■□□□□ 0.23
AP000439.1-201ENST00000544004 PAPPAQ13219 1627 aa16.52■□□□□ 0.23
AP000439.1-201ENST00000544004 PIK3C2AO00443 1686 aa16.51■□□□□ 0.23
AP000439.1-201ENST00000544004 CSB-PGBD3P0DP91 1061 aa16.51■□□□□ 0.23
AP000439.1-201ENST00000544004 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
AP000439.1-201ENST00000544004 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
AP000439.1-201ENST00000544004 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
AP000439.1-201ENST00000544004 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
AP000439.1-201ENST00000544004 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
AP000439.1-201ENST00000544004 GOLGB1Q14789 3259 aaKnown RBP16.49■□□□□ 0.23
AP000439.1-201ENST00000544004 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
AP000439.1-201ENST00000544004 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
AP000439.1-201ENST00000544004 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
AP000439.1-201ENST00000544004 RAB3GAP2Q9H2M9 1393 aa16.49■□□□□ 0.23
AP000439.1-201ENST00000544004 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
AP000439.1-201ENST00000544004 ZNF827Q17R98 1081 aa16.48■□□□□ 0.23
AP000439.1-201ENST00000544004 ARHGEF25Q86VW2 580 aa16.48■□□□□ 0.23
AP000439.1-201ENST00000544004 BTAF1O14981 1849 aa16.47■□□□□ 0.23
AP000439.1-201ENST00000544004 TNS2Q63HR2 1409 aa16.47■□□□□ 0.23
AP000439.1-201ENST00000544004 TRPM1Q7Z4N2 1603 aa16.47■□□□□ 0.23
AP000439.1-201ENST00000544004 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.23
AP000439.1-201ENST00000544004 SOX12O15370 315 aa16.46■□□□□ 0.23
AP000439.1-201ENST00000544004 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
AP000439.1-201ENST00000544004 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
AP000439.1-201ENST00000544004 KCNH5Q8NCM2 988 aa16.45■□□□□ 0.22
AP000439.1-201ENST00000544004 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
AP000439.1-201ENST00000544004 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
AP000439.1-201ENST00000544004 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
AP000439.1-201ENST00000544004 POLD1P28340 1107 aa16.44■□□□□ 0.22
AP000439.1-201ENST00000544004 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
AP000439.1-201ENST00000544004 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
AP000439.1-201ENST00000544004 QSER1Q2KHR3 1735 aa16.44■□□□□ 0.22
AP000439.1-201ENST00000544004 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
AP000439.1-201ENST00000544004 ABCC6O95255 1503 aa16.43■□□□□ 0.22
AP000439.1-201ENST00000544004 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
AP000439.1-201ENST00000544004 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
AP000439.1-201ENST00000544004 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
AP000439.1-201ENST00000544004 NFAT5O94916 1531 aa16.4■□□□□ 0.22
AP000439.1-201ENST00000544004 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
AP000439.1-201ENST00000544004 PNPLA7Q6ZV29 1317 aa16.39■□□□□ 0.21
AP000439.1-201ENST00000544004 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
AP000439.1-201ENST00000544004 IL2RBP14784 551 aa16.37■□□□□ 0.21
AP000439.1-201ENST00000544004 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
AP000439.1-201ENST00000544004 NLRP2Q9NX02 1062 aa16.37■□□□□ 0.21
AP000439.1-201ENST00000544004 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
AP000439.1-201ENST00000544004 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
AP000439.1-201ENST00000544004 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
AP000439.1-201ENST00000544004 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
AP000439.1-201ENST00000544004 ERBB3P21860 1342 aa16.35■□□□□ 0.21
AP000439.1-201ENST00000544004 LTN1O94822 1766 aa16.34■□□□□ 0.21
AP000439.1-201ENST00000544004 HSPA6P17066 643 aa16.34■□□□□ 0.21
AP000439.1-201ENST00000544004 KCNQ4P56696 695 aa16.34■□□□□ 0.21
AP000439.1-201ENST00000544004 GPBP1L1Q9HC44 474 aaPredicted RBP16.34■□□□□ 0.21
AP000439.1-201ENST00000544004 EVC2Q86UK5 1308 aa16.34■□□□□ 0.21
AP000439.1-201ENST00000544004 LY75O60449 1722 aa16.31■□□□□ 0.2
AP000439.1-201ENST00000544004 KTN1Q86UP2 1357 aaKnown RBP16.3■□□□□ 0.2
AP000439.1-201ENST00000544004 DDX54Q8TDD1 881 aaKnown RBP16.3■□□□□ 0.2
AP000439.1-201ENST00000544004 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
AP000439.1-201ENST00000544004 ZNF526Q8TF50 670 aaPredicted RBP16.3■□□□□ 0.2
AP000439.1-201ENST00000544004 SYTL4Q96C24 671 aaPredicted RBP16.3■□□□□ 0.2
AP000439.1-201ENST00000544004 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
AP000439.1-201ENST00000544004 MSH5O43196 834 aa16.29■□□□□ 0.2
AP000439.1-201ENST00000544004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
AP000439.1-201ENST00000544004 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
AP000439.1-201ENST00000544004 USP54Q70EL1 1684 aa16.27■□□□□ 0.2
AP000439.1-201ENST00000544004 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.2
AP000439.1-201ENST00000544004 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
AP000439.1-201ENST00000544004 ADCY9O60503 1353 aa16.26■□□□□ 0.19
AP000439.1-201ENST00000544004 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
AP000439.1-201ENST00000544004 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
AP000439.1-201ENST00000544004 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms