RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 MYOM1P52179 1685 aa26.68■■□□□ 1.86
SPPL3-208ENST00000543854 ARHGEF25Q86VW2 580 aa26.67■■□□□ 1.86
SPPL3-208ENST00000543854 CRB1P82279 1406 aa26.66■■□□□ 1.86
SPPL3-208ENST00000543854 LTN1O94822 1766 aa26.65■■□□□ 1.86
SPPL3-208ENST00000543854 CCDC125Q86Z20 511 aa26.64■■□□□ 1.86
SPPL3-208ENST00000543854 TCP11L2Q8N4U5 519 aa26.64■■□□□ 1.86
SPPL3-208ENST00000543854 BLMP54132 1417 aaPredicted RBP26.64■■□□□ 1.85
SPPL3-208ENST00000543854 RGPD5Q99666 1765 aa26.63■■□□□ 1.85
SPPL3-208ENST00000543854 EIF4G2P78344 907 aaKnown RBP eCLIP26.63■■□□□ 1.852e-6■■■■■ 26.9
SPPL3-208ENST00000543854 BARGINQ6ZT62 677 aa26.63■■□□□ 1.85
SPPL3-208ENST00000543854 THRAP3Q9Y2W1 955 aaKnown RBP26.62■■□□□ 1.85
SPPL3-208ENST00000543854 AXIN2Q9Y2T1 843 aa26.6■■□□□ 1.85
SPPL3-208ENST00000543854 WDR17Q8IZU2 1322 aa26.6■■□□□ 1.85
SPPL3-208ENST00000543854 PARP4Q9UKK3 1724 aaKnown RBP26.59■■□□□ 1.85
SPPL3-208ENST00000543854 KIF20BQ96Q89 1820 aa26.58■■□□□ 1.85
SPPL3-208ENST00000543854 WNK3Q9BYP7 1800 aa26.58■■□□□ 1.85
SPPL3-208ENST00000543854 TOM1L2Q6ZVM7 507 aa26.58■■□□□ 1.85
SPPL3-208ENST00000543854 COG3Q96JB2 828 aa26.58■■□□□ 1.85
SPPL3-208ENST00000543854 HSPA5P11021 654 aaKnown RBP26.57■■□□□ 1.84
SPPL3-208ENST00000543854 CSB-PGBD3P0DP91 1061 aa26.56■■□□□ 1.84
SPPL3-208ENST00000543854 SF3B2Q13435 895 aaKnown RBP26.55■■□□□ 1.84
SPPL3-208ENST00000543854 RGPD1P0DJD0 1748 aa26.54■■□□□ 1.84
SPPL3-208ENST00000543854 LRRC37A3O60309 1634 aa26.54■■□□□ 1.84
SPPL3-208ENST00000543854 FAM182BQ5T319 152 aa26.52■■□□□ 1.84
SPPL3-208ENST00000543854 NSD3Q9BZ95 1437 aa26.52■■□□□ 1.84
SPPL3-208ENST00000543854 ERBB3P21860 1342 aa26.51■■□□□ 1.83
SPPL3-208ENST00000543854 PDE3BQ13370 1112 aa26.51■■□□□ 1.83
SPPL3-208ENST00000543854 POLR3GLQ9BT43 218 aa26.51■■□□□ 1.83
SPPL3-208ENST00000543854 CARD10Q9BWT7 1032 aa26.5■■□□□ 1.83
SPPL3-208ENST00000543854 CCDC7Q96M83 1385 aa26.49■■□□□ 1.83
SPPL3-208ENST00000543854 FYB1O15117 783 aa26.49■■□□□ 1.83
SPPL3-208ENST00000543854 GGNBP2Q9H3C7 697 aa26.48■■□□□ 1.83
SPPL3-208ENST00000543854 TNS1Q9HBL0 1735 aaKnown RBP26.48■■□□□ 1.83
SPPL3-208ENST00000543854 FAM208AQ9UK61 1670 aaKnown RBP26.47■■□□□ 1.83
SPPL3-208ENST00000543854 FAM196AQ6ZSG2 479 aa26.47■■□□□ 1.83
SPPL3-208ENST00000543854 CDCA7Q9BWT1 371 aaPredicted RBP26.46■■□□□ 1.83
SPPL3-208ENST00000543854 CARD14Q9BXL6 1004 aa26.46■■□□□ 1.83
SPPL3-208ENST00000543854 MAP3K19Q56UN5 1328 aa26.45■■□□□ 1.83
SPPL3-208ENST00000543854 ANKRD24Q8TF21 1146 aa26.45■■□□□ 1.82
SPPL3-208ENST00000543854 DISP2A7MBM2 1401 aa26.45■■□□□ 1.82
SPPL3-208ENST00000543854 DEFB132Q7Z7B7 95 aa26.44■■□□□ 1.82
SPPL3-208ENST00000543854 RTL1A6NKG5 1358 aa26.44■■□□□ 1.82
SPPL3-208ENST00000543854 DDB1Q16531 1140 aa26.43■■□□□ 1.82
SPPL3-208ENST00000543854 IP6K1Q92551 441 aa26.43■■□□□ 1.82
SPPL3-208ENST00000543854 OVOS2A0A0G2JMS6 1433 aa26.42■■□□□ 1.82
SPPL3-208ENST00000543854 BAG6P46379 1132 aa26.42■■□□□ 1.82
SPPL3-208ENST00000543854 NLRP2Q9NX02 1062 aa26.42■■□□□ 1.82
SPPL3-208ENST00000543854 CGNL1Q0VF96 1302 aa26.41■■□□□ 1.82
SPPL3-208ENST00000543854 AMPHP49418 695 aa26.41■■□□□ 1.82
SPPL3-208ENST00000543854 PEAK1Q9H792 1746 aa26.41■■□□□ 1.82
SPPL3-208ENST00000543854 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
SPPL3-208ENST00000543854 C11orf95C9JLR9 678 aaPredicted RBP26.39■■□□□ 1.82
SPPL3-208ENST00000543854 FBLN1P23142 703 aa26.39■■□□□ 1.82
SPPL3-208ENST00000543854 HOXC9P31274 260 aa26.39■■□□□ 1.82
SPPL3-208ENST00000543854 TRIM37O94972 964 aa26.38■■□□□ 1.81
SPPL3-208ENST00000543854 RRS1Q15050 365 aaKnown RBP26.38■■□□□ 1.81
SPPL3-208ENST00000543854 ANKRD26Q9UPS8 1709 aa26.37■■□□□ 1.81
SPPL3-208ENST00000543854 LTV1Q96GA3 475 aaPredicted RBP26.37■■□□□ 1.81
SPPL3-208ENST00000543854 SMG6Q86US8 1419 aaKnown RBP26.35■■□□□ 1.81
SPPL3-208ENST00000543854 KIF24Q5T7B8 1368 aa26.34■■□□□ 1.81
SPPL3-208ENST00000543854 IL2RBP14784 551 aa26.33■■□□□ 1.81
SPPL3-208ENST00000543854 FLT4P35916 1363 aa26.33■■□□□ 1.8
SPPL3-208ENST00000543854 EXOC5O00471 708 aa26.32■■□□□ 1.8
SPPL3-208ENST00000543854 PANK3Q9H999 370 aa26.32■■□□□ 1.8
SPPL3-208ENST00000543854 SBF2Q86WG5 1849 aa26.32■■□□□ 1.8
SPPL3-208ENST00000543854 EN1Q05925 392 aaPredicted RBP26.31■■□□□ 1.8
SPPL3-208ENST00000543854 RGPD2P0DJD1 1756 aa26.3■■□□□ 1.8
SPPL3-208ENST00000543854 MARCH10Q8NA82 808 aaPredicted RBP26.3■■□□□ 1.8
SPPL3-208ENST00000543854 BCL9O00512 1426 aa26.3■■□□□ 1.8
SPPL3-208ENST00000543854 APBA3O96018 575 aa26.29■■□□□ 1.8
SPPL3-208ENST00000543854 KIF7Q2M1P5 1343 aa26.29■■□□□ 1.8
SPPL3-208ENST00000543854 INSRP06213 1382 aa26.29■■□□□ 1.8
SPPL3-208ENST00000543854 PARD3Q8TEW0 1356 aa26.29■■□□□ 1.8
SPPL3-208ENST00000543854 NSD2O96028 1365 aa26.28■■□□□ 1.8
SPPL3-208ENST00000543854 RREB1Q92766 1687 aa26.25■■□□□ 1.79
SPPL3-208ENST00000543854 EMILIN1Q9Y6C2 1016 aa26.25■■□□□ 1.79
SPPL3-208ENST00000543854 RGPD3A6NKT7 1758 aaPredicted RBP26.25■■□□□ 1.79
SPPL3-208ENST00000543854 RGPD4Q7Z3J3 1758 aa26.25■■□□□ 1.79
SPPL3-208ENST00000543854 MAP2P11137 1827 aaKnown RBP26.24■■□□□ 1.79
SPPL3-208ENST00000543854 EZH2Q15910 746 aaKnown RBP26.24■■□□□ 1.79
SPPL3-208ENST00000543854 HSP90AB2PQ58FF8 381 aa26.24■■□□□ 1.79
SPPL3-208ENST00000543854 CAMKK2Q96RR4 588 aa26.23■■□□□ 1.79
SPPL3-208ENST00000543854 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
SPPL3-208ENST00000543854 PPM1GO15355 546 aaPredicted RBP26.22■■□□□ 1.79
SPPL3-208ENST00000543854 MEGF6O75095 1541 aa26.21■■□□□ 1.79
SPPL3-208ENST00000543854 BCL11BQ9C0K0 894 aaPredicted RBP26.21■■□□□ 1.79
SPPL3-208ENST00000543854 NUP188Q5SRE5 1749 aa26.2■■□□□ 1.79
SPPL3-208ENST00000543854 KNSTRNQ9Y448 316 aa26.2■■□□□ 1.78
SPPL3-208ENST00000543854 TNNT2P45379 298 aaPredicted RBP26.19■■□□□ 1.78
SPPL3-208ENST00000543854 NBPF6Q5VWK0 638 aa26.19■■□□□ 1.78
SPPL3-208ENST00000543854 NBPF4Q96M43 638 aa26.19■■□□□ 1.78
SPPL3-208ENST00000543854 SRCAPQ6ZRS2 3230 aa26.19■■□□□ 1.78
SPPL3-208ENST00000543854 SHANK3Q9BYB0 1731 aa26.18■■□□□ 1.78
SPPL3-208ENST00000543854 USHBP1Q8N6Y0 703 aa26.17■■□□□ 1.78
SPPL3-208ENST00000543854 POLKQ9UBT6 870 aa26.17■■□□□ 1.78
SPPL3-208ENST00000543854 WASHC2AQ641Q2 1341 aa26.16■■□□□ 1.78
SPPL3-208ENST00000543854 RAPGEF4Q8WZA2 1011 aa26.16■■□□□ 1.78
SPPL3-208ENST00000543854 PTF1AQ7RTS3 328 aa26.14■■□□□ 1.78
SPPL3-208ENST00000543854 MORC1Q86VD1 984 aa26.14■■□□□ 1.78
SPPL3-208ENST00000543854 DDX54Q8TDD1 881 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms