RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PARP4Q9UKK3 1724 aaKnown RBP32.33■■■□□ 2.77
CDKN3-207ENST00000543789 CPSF1Q10570 1443 aaKnown RBP32.32■■■□□ 2.76
CDKN3-207ENST00000543789 CARD10Q9BWT7 1032 aa32.31■■■□□ 2.76
CDKN3-207ENST00000543789 SPON1Q9HCB6 807 aa32.31■■■□□ 2.76
CDKN3-207ENST00000543789 MARCH10Q8NA82 808 aaPredicted RBP32.3■■■□□ 2.76
CDKN3-207ENST00000543789 RREB1Q92766 1687 aa32.3■■■□□ 2.76
CDKN3-207ENST00000543789 PIK3C2AO00443 1686 aa32.28■■■□□ 2.76
CDKN3-207ENST00000543789 KCNQ2O43526 872 aa32.28■■■□□ 2.76
CDKN3-207ENST00000543789 TRPM1Q7Z4N2 1603 aa32.27■■■□□ 2.76
CDKN3-207ENST00000543789 PTF1AQ7RTS3 328 aa32.27■■■□□ 2.76
CDKN3-207ENST00000543789 KTN1Q86UP2 1357 aaKnown RBP32.27■■■□□ 2.76
CDKN3-207ENST00000543789 NUP188Q5SRE5 1749 aa32.26■■■□□ 2.76
CDKN3-207ENST00000543789 PPP1R1BQ9UD71 204 aaPredicted RBP32.26■■■□□ 2.75
CDKN3-207ENST00000543789 EXOC5O00471 708 aa32.25■■■□□ 2.75
CDKN3-207ENST00000543789 COL18A1P39060 1754 aa32.24■■■□□ 2.75
CDKN3-207ENST00000543789 PEAK1Q9H792 1746 aa32.23■■■□□ 2.75
CDKN3-207ENST00000543789 BCL9O00512 1426 aa32.23■■■□□ 2.75
CDKN3-207ENST00000543789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.21■■■□□ 2.75
CDKN3-207ENST00000543789 PROM2Q8N271 834 aa32.21■■■□□ 2.75
CDKN3-207ENST00000543789 LRRC37A3O60309 1634 aa32.21■■■□□ 2.75
CDKN3-207ENST00000543789 ANO8Q9HCE9 1232 aaPredicted RBP32.2■■■□□ 2.75
CDKN3-207ENST00000543789 CCDC7Q96M83 1385 aa32.19■■■□□ 2.74
CDKN3-207ENST00000543789 CARD11Q9BXL7 1154 aa32.18■■■□□ 2.74
CDKN3-207ENST00000543789 TMC1Q8TDI8 760 aa32.16■■■□□ 2.74
CDKN3-207ENST00000543789 USP31Q70CQ4 1352 aa32.16■■■□□ 2.74
CDKN3-207ENST00000543789 SBNO2Q9Y2G9 1366 aa32.16■■■□□ 2.74
CDKN3-207ENST00000543789 NFAT5O94916 1531 aa32.15■■■□□ 2.74
CDKN3-207ENST00000543789 NME9Q86XW9 330 aa32.14■■■□□ 2.74
CDKN3-207ENST00000543789 TXNRD1Q16881 649 aa32.13■■■□□ 2.73
CDKN3-207ENST00000543789 HDGFL2Q7Z4V5 671 aaPredicted RBP32.13■■■□□ 2.73
CDKN3-207ENST00000543789 AKAP12Q02952 1782 aa32.12■■■□□ 2.73
CDKN3-207ENST00000543789 DCAF8L1A6NGE4 600 aa32.12■■■□□ 2.73
CDKN3-207ENST00000543789 NLRP2Q9NX02 1062 aa32.12■■■□□ 2.73
CDKN3-207ENST00000543789 NINLQ9Y2I6 1382 aa32.11■■■□□ 2.73
CDKN3-207ENST00000543789 SLC12A5Q9H2X9 1139 aa32.11■■■□□ 2.73
CDKN3-207ENST00000543789 YY1P25490 414 aa32.1■■■□□ 2.73
CDKN3-207ENST00000543789 PDGFDQ9GZP0 370 aaPredicted RBP32.1■■■□□ 2.73
CDKN3-207ENST00000543789 ERBB3P21860 1342 aa32.09■■■□□ 2.73
CDKN3-207ENST00000543789 STK32BQ9NY57 414 aa32.09■■■□□ 2.73
CDKN3-207ENST00000543789 RGPD3A6NKT7 1758 aaPredicted RBP32.09■■■□□ 2.73
CDKN3-207ENST00000543789 RGPD4Q7Z3J3 1758 aa32.09■■■□□ 2.73
CDKN3-207ENST00000543789 SBF2Q86WG5 1849 aa32.08■■■□□ 2.73
CDKN3-207ENST00000543789 ABCC6O95255 1503 aa32.08■■■□□ 2.73
CDKN3-207ENST00000543789 ZBTB7AO95365 584 aa32.07■■■□□ 2.72
CDKN3-207ENST00000543789 CD163L1Q9NR16 1453 aa32.06■■■□□ 2.72
CDKN3-207ENST00000543789 TERF2IPQ9NYB0 399 aa32.06■■■□□ 2.72
CDKN3-207ENST00000543789 TNS2Q63HR2 1409 aa32.06■■■□□ 2.72
CDKN3-207ENST00000543789 IL2RBP14784 551 aa32.05■■■□□ 2.72
CDKN3-207ENST00000543789 SLC15A2Q16348 729 aa32.05■■■□□ 2.72
CDKN3-207ENST00000543789 ANKRD24Q8TF21 1146 aa32.04■■■□□ 2.72
CDKN3-207ENST00000543789 ACSBG1Q96GR2 724 aa32.04■■■□□ 2.72
CDKN3-207ENST00000543789 PUS7Q96PZ0 661 aaKnown RBP32.03■■■□□ 2.72
CDKN3-207ENST00000543789 RGPD5Q99666 1765 aa32.03■■■□□ 2.72
CDKN3-207ENST00000543789 ATF5Q9Y2D1 282 aaPredicted RBP32.02■■■□□ 2.72
CDKN3-207ENST00000543789 WNK3Q9BYP7 1800 aa32.02■■■□□ 2.72
CDKN3-207ENST00000543789 EDC4Q6P2E9 1401 aaKnown RBP32■■■□□ 2.71
CDKN3-207ENST00000543789 PTGER2P43116 358 aa32■■■□□ 2.71
CDKN3-207ENST00000543789 MON2Q7Z3U7 1717 aa31.99■■■□□ 2.71
CDKN3-207ENST00000543789 TONSLQ96HA7 1378 aa31.98■■■□□ 2.71
CDKN3-207ENST00000543789 A0A1W2PP64 1363 aa31.96■■■□□ 2.71
CDKN3-207ENST00000543789 IP6K1Q92551 441 aa31.96■■■□□ 2.71
CDKN3-207ENST00000543789 CASZ1Q86V15 1759 aa31.94■■■□□ 2.7
CDKN3-207ENST00000543789 MTFR1LQ9H019 292 aa31.94■■■□□ 2.7
CDKN3-207ENST00000543789 USP54Q70EL1 1684 aa31.9■■■□□ 2.7
CDKN3-207ENST00000543789 LTV1Q96GA3 475 aaPredicted RBP31.9■■■□□ 2.7
CDKN3-207ENST00000543789 DDX54Q8TDD1 881 aaKnown RBP31.89■■■□□ 2.7
CDKN3-207ENST00000543789 TESK2Q96S53 571 aa31.89■■■□□ 2.7
CDKN3-207ENST00000543789 ST20-MTHFSA0A0A6YYL1 179 aa31.88■■■□□ 2.69
CDKN3-207ENST00000543789 SLC24A1O60721 1099 aa31.88■■■□□ 2.69
CDKN3-207ENST00000543789 COG3Q96JB2 828 aa31.88■■■□□ 2.69
CDKN3-207ENST00000543789 SYT17Q9BSW7 474 aa31.88■■■□□ 2.69
CDKN3-207ENST00000543789 SGIP1Q9BQI5 828 aa31.87■■■□□ 2.69
CDKN3-207ENST00000543789 FHDC1Q9C0D6 1143 aaPredicted RBP31.87■■■□□ 2.69
CDKN3-207ENST00000543789 LRRC4BQ9NT99 713 aa31.85■■■□□ 2.69
CDKN3-207ENST00000543789 NHSQ6T4R5 1651 aa31.85■■■□□ 2.69
CDKN3-207ENST00000543789 AMPHP49418 695 aa31.83■■■□□ 2.69
CDKN3-207ENST00000543789 MAP3K19Q56UN5 1328 aa31.82■■■□□ 2.68
CDKN3-207ENST00000543789 ZNF827Q17R98 1081 aa31.82■■■□□ 2.68
CDKN3-207ENST00000543789 LTN1O94822 1766 aa31.81■■■□□ 2.68
CDKN3-207ENST00000543789 FBLN1P23142 703 aa31.81■■■□□ 2.68
CDKN3-207ENST00000543789 HOXC9P31274 260 aa31.81■■■□□ 2.68
CDKN3-207ENST00000543789 ARXQ96QS3 562 aa31.81■■■□□ 2.68
CDKN3-207ENST00000543789 SLC27A3Q5K4L6 730 aa31.8■■■□□ 2.68
CDKN3-207ENST00000543789 MYOM1P52179 1685 aa31.78■■■□□ 2.68
CDKN3-207ENST00000543789 PRIM1P49642 420 aaKnown RBP31.77■■■□□ 2.68
CDKN3-207ENST00000543789 AKT1S1Q96B36 256 aa31.77■■■□□ 2.68
CDKN3-207ENST00000543789 SYTL4Q96C24 671 aaPredicted RBP31.77■■■□□ 2.68
CDKN3-207ENST00000543789 ZCRB1Q8TBF4 217 aaKnown RBP31.75■■■□□ 2.67
CDKN3-207ENST00000543789 ANKRD36BQ8N2N9 1353 aa31.73■■■□□ 2.67
CDKN3-207ENST00000543789 SLC16A10Q8TF71 515 aa31.73■■■□□ 2.67
CDKN3-207ENST00000543789 PAPPAQ13219 1627 aa31.71■■■□□ 2.67
CDKN3-207ENST00000543789 BTAF1O14981 1849 aa31.71■■■□□ 2.67
CDKN3-207ENST00000543789 FYB1O15117 783 aa31.7■■■□□ 2.67
CDKN3-207ENST00000543789 TMF1P82094 1093 aa31.7■■■□□ 2.67
CDKN3-207ENST00000543789 RRS1Q15050 365 aaKnown RBP31.7■■■□□ 2.67
CDKN3-207ENST00000543789 TFCP2L1Q9NZI6 479 aa31.69■■■□□ 2.66
CDKN3-207ENST00000543789 KCNQ4P56696 695 aa31.68■■■□□ 2.66
CDKN3-207ENST00000543789 NBPF6Q5VWK0 638 aa31.68■■■□□ 2.66
CDKN3-207ENST00000543789 NBPF4Q96M43 638 aa31.68■■■□□ 2.66
CDKN3-207ENST00000543789 GGNBP2Q9H3C7 697 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms