RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 FGD1P98174 961 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 TBC1D9Q6ZT07 1266 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 ARHGAP45Q92619 1136 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 TSPY26PQ9H489 355 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 SYCP2Q9BX26 1530 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 MYO3AQ8NEV4 1616 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 DSG3P32926 999 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 CHMP7Q8WUX9 453 aaPredicted RBP6.11□□□□□ -1.43
LMO3-229ENST00000543721 KIF3AQ9Y496 699 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 NSD3Q9BZ95 1437 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 ZSCAN20P17040 1043 aaPredicted RBP6.1□□□□□ -1.43
LMO3-229ENST00000543721 FBLN2P98095 1184 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 PLCB2Q00722 1185 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 EXOSC9Q06265 439 aaKnown RBP6.1□□□□□ -1.43
LMO3-229ENST00000543721 ANKRD45Q5TZF3 282 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 INTS3Q68E01 1043 aaKnown RBP6.1□□□□□ -1.43
LMO3-229ENST00000543721 TMEM57Q8N5G2 664 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 PIBF1Q8WXW3 757 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 SSH1Q8WYL5 1049 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 NOB1Q9ULX3 412 aaKnown RBP6.1□□□□□ -1.43
LMO3-229ENST00000543721 NOS1P29475 1434 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 ERCC6Q03468 1493 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 ARHGAP5Q13017 1502 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 CLTCL1P53675 1640 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 PRPF40AO75400 957 aaKnown RBP6.1□□□□□ -1.43
LMO3-229ENST00000543721 FEZ1Q99689 392 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 TRAPPC8Q9Y2L5 1435 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 U2AF1L5P0DN76 240 aaPredicted RBP6.1□□□□□ -1.43
LMO3-229ENST00000543721 U2AF1Q01081 240 aaKnown RBP eCLIP6.1□□□□□ -1.43
LMO3-229ENST00000543721 PDCL2Q8N4E4 241 aa6.1□□□□□ -1.43
LMO3-229ENST00000543721 UHRF1BP1LA0JNW5 1464 aa6.09□□□□□ -1.43
LMO3-229ENST00000543721 REC8O95072 547 aa6.09□□□□□ -1.43
LMO3-229ENST00000543721 MTHFSP49914 203 aa6.09□□□□□ -1.43
LMO3-229ENST00000543721 MED14O60244 1454 aa6.09□□□□□ -1.43
LMO3-229ENST00000543721 KIF24Q5T7B8 1368 aa6.09□□□□□ -1.43
LMO3-229ENST00000543721 A0A0U1RQG5 324 aaPredicted RBP6.08□□□□□ -1.44
LMO3-229ENST00000543721 MAP3K4Q9Y6R4 1608 aa6.08□□□□□ -1.44
LMO3-229ENST00000543721 CD2BP2O95400 341 aaKnown RBP6.08□□□□□ -1.44
LMO3-229ENST00000543721 TMPOP42166 694 aaKnown RBP6.08□□□□□ -1.44
LMO3-229ENST00000543721 NOLC1Q14978 699 aaKnown RBP eCLIP6.08□□□□□ -1.44
LMO3-229ENST00000543721 PPP4R3BQ5MIZ7 849 aa6.08□□□□□ -1.44
LMO3-229ENST00000543721 ZHX1Q9UKY1 873 aaPredicted RBP6.08□□□□□ -1.44
LMO3-229ENST00000543721 SETBP1Q9Y6X0 1596 aa6.08□□□□□ -1.44
LMO3-229ENST00000543721 GOLGA6L6A8MZA4 724 aa6.08□□□□□ -1.44
LMO3-229ENST00000543721 SYCP1Q15431 976 aa6.08□□□□□ -1.44
LMO3-229ENST00000543721 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.08□□□□□ -1.44
LMO3-229ENST00000543721 PIK3R4Q99570 1358 aa6.08□□□□□ -1.44
LMO3-229ENST00000543721 TET3O43151 1660 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 SYCE3A1L190 88 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 FAM193AP78312 1265 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 GPT2Q8TD30 523 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 SPTLC3Q9NUV7 552 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 ATAD2Q6PL18 1390 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 GABPB1Q06547 395 aaPredicted RBP6.07□□□□□ -1.44
LMO3-229ENST00000543721 USP26Q9BXU7 913 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 TMEM63CQ9P1W3 806 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 FKBP5Q13451 457 aaPredicted RBP6.07□□□□□ -1.44
LMO3-229ENST00000543721 C14orf37Q86TY3 774 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 INTS4Q96HW7 963 aaKnown RBP6.07□□□□□ -1.44
LMO3-229ENST00000543721 API5Q9BZZ5 524 aaKnown RBP6.07□□□□□ -1.44
LMO3-229ENST00000543721 PRDM10Q9NQV6 1147 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 FBXO3Q9UK99 471 aa6.07□□□□□ -1.44
LMO3-229ENST00000543721 ZBTB7BO15156 539 aaPredicted RBP6.06□□□□□ -1.44
LMO3-229ENST00000543721 ABCB7O75027 752 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 MCCP23508 829 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 HAP1P54257 671 aaPredicted RBP6.06□□□□□ -1.44
LMO3-229ENST00000543721 TMEM132AQ24JP5 1023 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 EFCAB2Q5VUJ9 269 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 CREBRFQ8IUR6 639 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 RBM42Q9BTD8 480 aaKnown RBP6.06□□□□□ -1.44
LMO3-229ENST00000543721 PPIP5K1Q6PFW1 1433 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 CCDC66A2RUB6 948 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 TSR2Q969E8 191 aaKnown RBP6.06□□□□□ -1.44
LMO3-229ENST00000543721 OGFRQ9NZT2 677 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 TTC22Q5TAA0 569 aa6.06□□□□□ -1.44
LMO3-229ENST00000543721 PTCH1Q13635 1447 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 ABCA6Q8N139 1617 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 ANKRD36BQ8N2N9 1353 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 CBX1P83916 185 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 CFAP70Q5T0N1 1121 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 RBM27Q9P2N5 1060 aaKnown RBP6.05□□□□□ -1.44
LMO3-229ENST00000543721 ZBTB12Q9Y330 459 aaPredicted RBP6.05□□□□□ -1.44
LMO3-229ENST00000543721 NRXN1Q9ULB1 1477 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 BRD1O95696 1058 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 TRIM35Q9UPQ4 493 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 CCDC183Q5T5S1 534 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 PLEKHM2Q8IWE5 1019 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 PLEKHF1Q96S99 279 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 DCTPP1Q9H773 170 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 USP25Q9UHP3 1055 aa6.05□□□□□ -1.44
LMO3-229ENST00000543721 INO80Q9ULG1 1556 aaPredicted RBP6.04□□□□□ -1.44
LMO3-229ENST00000543721 EVC2Q86UK5 1308 aa6.04□□□□□ -1.44
LMO3-229ENST00000543721 PPRC1Q5VV67 1664 aaKnown RBP6.04□□□□□ -1.44
LMO3-229ENST00000543721 ERC2O15083 957 aa6.04□□□□□ -1.44
LMO3-229ENST00000543721 EPB41L2O43491 1005 aaKnown RBP6.04□□□□□ -1.44
LMO3-229ENST00000543721 ANAPC15P60006 121 aa6.04□□□□□ -1.44
LMO3-229ENST00000543721 PDE4CQ08493 712 aa6.04□□□□□ -1.44
LMO3-229ENST00000543721 RPAP2Q8IXW5 612 aaPredicted RBP6.04□□□□□ -1.44
LMO3-229ENST00000543721 ZNF710Q8N1W2 664 aa6.04□□□□□ -1.44
LMO3-229ENST00000543721 ANKRD7Q92527 254 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms