RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 SLIT3O75094 1523 aa10.03□□□□□ -0.8
NUP43-206ENST00000543637 APBA3O96018 575 aa10.03□□□□□ -0.8
NUP43-206ENST00000543637 TMF1P82094 1093 aa10.03□□□□□ -0.8
NUP43-206ENST00000543637 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
NUP43-206ENST00000543637 DDB1Q16531 1140 aa10.03□□□□□ -0.8
NUP43-206ENST00000543637 ARHGEF25Q86VW2 580 aa10.03□□□□□ -0.8
NUP43-206ENST00000543637 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
NUP43-206ENST00000543637 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
NUP43-206ENST00000543637 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
NUP43-206ENST00000543637 COL18A1P39060 1754 aa10.01□□□□□ -0.81
NUP43-206ENST00000543637 EXOC5O00471 708 aa10.01□□□□□ -0.81
NUP43-206ENST00000543637 AXIN2Q9Y2T1 843 aa10.01□□□□□ -0.81
NUP43-206ENST00000543637 PARP4Q9UKK3 1724 aaKnown RBP10.01□□□□□ -0.81
NUP43-206ENST00000543637 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
NUP43-206ENST00000543637 LTN1O94822 1766 aa10.01□□□□□ -0.81
NUP43-206ENST00000543637 EZH2Q15910 746 aaKnown RBP10□□□□□ -0.81
NUP43-206ENST00000543637 NBPF14Q5TI25 921 aa10□□□□□ -0.81
NUP43-206ENST00000543637 NME9Q86XW9 330 aa10□□□□□ -0.81
NUP43-206ENST00000543637 COG3Q96JB2 828 aa10□□□□□ -0.81
NUP43-206ENST00000543637 CARD10Q9BWT7 1032 aa10□□□□□ -0.81
NUP43-206ENST00000543637 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
NUP43-206ENST00000543637 NINLQ9Y2I6 1382 aa10□□□□□ -0.81
NUP43-206ENST00000543637 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
NUP43-206ENST00000543637 NLRP2Q9NX02 1062 aa9.99□□□□□ -0.81
NUP43-206ENST00000543637 USP31Q70CQ4 1352 aa9.99□□□□□ -0.81
NUP43-206ENST00000543637 TESK2Q96S53 571 aa9.98□□□□□ -0.81
NUP43-206ENST00000543637 KAT6BQ8WYB5 2073 aa9.98□□□□□ -0.81
NUP43-206ENST00000543637 TNS1Q9HBL0 1735 aaKnown RBP9.98□□□□□ -0.81
NUP43-206ENST00000543637 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
NUP43-206ENST00000543637 SBF2Q86WG5 1849 aa9.98□□□□□ -0.81
NUP43-206ENST00000543637 PSDA5PKW4 1024 aaPredicted RBP9.97□□□□□ -0.81
NUP43-206ENST00000543637 CCER1Q8TC90 406 aaPredicted RBP9.97□□□□□ -0.81
NUP43-206ENST00000543637 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
NUP43-206ENST00000543637 WNK3Q9BYP7 1800 aa9.97□□□□□ -0.81
NUP43-206ENST00000543637 A0A1W2PP64 1363 aa9.97□□□□□ -0.81
NUP43-206ENST00000543637 PARD3Q8TEW0 1356 aa9.97□□□□□ -0.81
NUP43-206ENST00000543637 USP54Q70EL1 1684 aa9.96□□□□□ -0.81
NUP43-206ENST00000543637 AMPHP49418 695 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.82
NUP43-206ENST00000543637 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
NUP43-206ENST00000543637 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 USP47Q96K76 1375 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 OVOS2A0A0G2JMS6 1433 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 OVOS2A0A0J9YW53 1432 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 OVOS2Q6IE36 1432 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 CD163L1Q9NR16 1453 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 ABCC6O95255 1503 aa9.96□□□□□ -0.82
NUP43-206ENST00000543637 IL2RBP14784 551 aa9.95□□□□□ -0.82
NUP43-206ENST00000543637 IP6K1Q92551 441 aa9.95□□□□□ -0.82
NUP43-206ENST00000543637 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
NUP43-206ENST00000543637 DISP2A7MBM2 1401 aa9.95□□□□□ -0.82
NUP43-206ENST00000543637 NFAT5O94916 1531 aa9.94□□□□□ -0.82
NUP43-206ENST00000543637 PLSCR1O15162 318 aa9.94□□□□□ -0.82
NUP43-206ENST00000543637 LTV1Q96GA3 475 aaPredicted RBP9.94□□□□□ -0.82
NUP43-206ENST00000543637 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
NUP43-206ENST00000543637 ANKRD36BQ8N2N9 1353 aa9.93□□□□□ -0.82
NUP43-206ENST00000543637 ERBB3P21860 1342 aa9.93□□□□□ -0.82
NUP43-206ENST00000543637 MARCH10Q8NA82 808 aaPredicted RBP9.93□□□□□ -0.82
NUP43-206ENST00000543637 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
NUP43-206ENST00000543637 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
NUP43-206ENST00000543637 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
NUP43-206ENST00000543637 GGNBP2Q9H3C7 697 aa9.92□□□□□ -0.82
NUP43-206ENST00000543637 RREB1Q92766 1687 aa9.92□□□□□ -0.82
NUP43-206ENST00000543637 PEAK1Q9H792 1746 aa9.91□□□□□ -0.82
NUP43-206ENST00000543637 FYB1O15117 783 aa9.91□□□□□ -0.82
NUP43-206ENST00000543637 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
NUP43-206ENST00000543637 HOXC9P31274 260 aa9.9□□□□□ -0.82
NUP43-206ENST00000543637 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
NUP43-206ENST00000543637 RGPD3A6NKT7 1758 aaPredicted RBP9.9□□□□□ -0.82
NUP43-206ENST00000543637 RGPD2P0DJD1 1756 aa9.9□□□□□ -0.82
NUP43-206ENST00000543637 RGPD4Q7Z3J3 1758 aa9.9□□□□□ -0.82
NUP43-206ENST00000543637 NUP188Q5SRE5 1749 aa9.9□□□□□ -0.83
NUP43-206ENST00000543637 LRP5O75197 1615 aa9.89□□□□□ -0.83
NUP43-206ENST00000543637 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
NUP43-206ENST00000543637 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
NUP43-206ENST00000543637 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
NUP43-206ENST00000543637 ACSBG1Q96GR2 724 aa9.89□□□□□ -0.83
NUP43-206ENST00000543637 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
NUP43-206ENST00000543637 FBLN1P23142 703 aa9.88□□□□□ -0.83
NUP43-206ENST00000543637 RRS1Q15050 365 aaKnown RBP9.88□□□□□ -0.83
NUP43-206ENST00000543637 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
NUP43-206ENST00000543637 STK32BQ9NY57 414 aa9.88□□□□□ -0.83
NUP43-206ENST00000543637 PPP1R1BQ9UD71 204 aaPredicted RBP9.88□□□□□ -0.83
NUP43-206ENST00000543637 BCL9O00512 1426 aa9.88□□□□□ -0.83
NUP43-206ENST00000543637 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
NUP43-206ENST00000543637 EP400Q96L91 3159 aa9.87□□□□□ -0.83
NUP43-206ENST00000543637 PPM1GO15355 546 aaPredicted RBP9.87□□□□□ -0.83
NUP43-206ENST00000543637 TXNRD1Q16881 649 aa9.87□□□□□ -0.83
NUP43-206ENST00000543637 ZCRB1Q8TBF4 217 aaKnown RBP9.87□□□□□ -0.83
NUP43-206ENST00000543637 RAPGEF4Q8WZA2 1011 aa9.87□□□□□ -0.83
NUP43-206ENST00000543637 CGNL1Q0VF96 1302 aa9.86□□□□□ -0.83
NUP43-206ENST00000543637 KCNQ2O43526 872 aa9.86□□□□□ -0.83
NUP43-206ENST00000543637 TATP17735 454 aaPredicted RBP9.86□□□□□ -0.83
NUP43-206ENST00000543637 SYTL4Q96C24 671 aaPredicted RBP9.86□□□□□ -0.83
NUP43-206ENST00000543637 NHSQ6T4R5 1651 aa9.86□□□□□ -0.83
NUP43-206ENST00000543637 RTL1A6NKG5 1358 aa9.86□□□□□ -0.83
NUP43-206ENST00000543637 HSPA5P11021 654 aaKnown RBP9.85□□□□□ -0.83
NUP43-206ENST00000543637 HMGB2P26583 209 aaKnown RBP9.85□□□□□ -0.83
NUP43-206ENST00000543637 PTF1AQ7RTS3 328 aa9.85□□□□□ -0.83
NUP43-206ENST00000543637 KIF24Q5T7B8 1368 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms