RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
VEGFB-204ENST00000543462 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
VEGFB-204ENST00000543462 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
VEGFB-204ENST00000543462 COG3Q96JB2 828 aa13.67□□□□□ -0.22
VEGFB-204ENST00000543462 KIF24Q5T7B8 1368 aa13.67□□□□□ -0.22
VEGFB-204ENST00000543462 RGPD1P0DJD0 1748 aa13.67□□□□□ -0.22
VEGFB-204ENST00000543462 RGS12O14924 1447 aa13.66□□□□□ -0.22
VEGFB-204ENST00000543462 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
VEGFB-204ENST00000543462 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
VEGFB-204ENST00000543462 USP21Q9UK80 565 aa13.66□□□□□ -0.22
VEGFB-204ENST00000543462 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
VEGFB-204ENST00000543462 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
VEGFB-204ENST00000543462 VPS72Q15906 364 aa13.65□□□□□ -0.22
VEGFB-204ENST00000543462 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
VEGFB-204ENST00000543462 AXIN2Q9Y2T1 843 aa13.65□□□□□ -0.22
VEGFB-204ENST00000543462 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
VEGFB-204ENST00000543462 FBLN1P23142 703 aa13.63□□□□□ -0.23
VEGFB-204ENST00000543462 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
VEGFB-204ENST00000543462 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
VEGFB-204ENST00000543462 CRB1P82279 1406 aa13.63□□□□□ -0.23
VEGFB-204ENST00000543462 ERBB3P21860 1342 aa13.63□□□□□ -0.23
VEGFB-204ENST00000543462 SPATA31A5Q5VU36 1347 aa13.63□□□□□ -0.23
VEGFB-204ENST00000543462 SPATA31A7Q8IWB4 1347 aa13.63□□□□□ -0.23
VEGFB-204ENST00000543462 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
VEGFB-204ENST00000543462 FLT4P35916 1363 aa13.62□□□□□ -0.23
VEGFB-204ENST00000543462 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
VEGFB-204ENST00000543462 SOX12O15370 315 aa13.61□□□□□ -0.23
VEGFB-204ENST00000543462 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
VEGFB-204ENST00000543462 IP6K1Q92551 441 aa13.61□□□□□ -0.23
VEGFB-204ENST00000543462 QTRT2Q9H974 415 aaKnown RBP13.61□□□□□ -0.23
VEGFB-204ENST00000543462 SPATA31A1Q5TZJ5 1347 aa13.61□□□□□ -0.23
VEGFB-204ENST00000543462 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
VEGFB-204ENST00000543462 INSRP06213 1382 aa13.6□□□□□ -0.23
VEGFB-204ENST00000543462 HOXC9P31274 260 aa13.6□□□□□ -0.23
VEGFB-204ENST00000543462 RBM6P78332 1123 aaKnown RBP13.6□□□□□ -0.23
VEGFB-204ENST00000543462 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
VEGFB-204ENST00000543462 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
VEGFB-204ENST00000543462 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
VEGFB-204ENST00000543462 PARD3Q8TEW0 1356 aa13.59□□□□□ -0.23
VEGFB-204ENST00000543462 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
VEGFB-204ENST00000543462 LARP1Q6PKG0 1096 aaKnown RBP13.59□□□□□ -0.23
VEGFB-204ENST00000543462 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
VEGFB-204ENST00000543462 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
VEGFB-204ENST00000543462 EP400Q96L91 3159 aa13.58□□□□□ -0.24
VEGFB-204ENST00000543462 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
VEGFB-204ENST00000543462 RXRBP28702 533 aa13.56□□□□□ -0.24
VEGFB-204ENST00000543462 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
VEGFB-204ENST00000543462 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
VEGFB-204ENST00000543462 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
VEGFB-204ENST00000543462 TNS1Q9HBL0 1735 aaKnown RBP13.54□□□□□ -0.24
VEGFB-204ENST00000543462 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
VEGFB-204ENST00000543462 HSP90AB2PQ58FF8 381 aa13.54□□□□□ -0.24
VEGFB-204ENST00000543462 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
VEGFB-204ENST00000543462 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
VEGFB-204ENST00000543462 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
VEGFB-204ENST00000543462 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
VEGFB-204ENST00000543462 MEGF6O75095 1541 aa13.54□□□□□ -0.24
VEGFB-204ENST00000543462 AMPHP49418 695 aa13.53□□□□□ -0.24
VEGFB-204ENST00000543462 DDX10Q13206 875 aaKnown RBP13.53□□□□□ -0.24
VEGFB-204ENST00000543462 TCP11L2Q8N4U5 519 aa13.53□□□□□ -0.24
VEGFB-204ENST00000543462 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
VEGFB-204ENST00000543462 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
VEGFB-204ENST00000543462 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
VEGFB-204ENST00000543462 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
VEGFB-204ENST00000543462 EVA1CP58658 441 aa13.51□□□□□ -0.25
VEGFB-204ENST00000543462 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
VEGFB-204ENST00000543462 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
VEGFB-204ENST00000543462 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
VEGFB-204ENST00000543462 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
VEGFB-204ENST00000543462 TOGARAM1Q9Y4F4 1720 aa13.5□□□□□ -0.25
VEGFB-204ENST00000543462 KDRP35968 1356 aa13.49□□□□□ -0.25
VEGFB-204ENST00000543462 IGSF1Q8N6C5 1336 aa13.49□□□□□ -0.25
VEGFB-204ENST00000543462 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
VEGFB-204ENST00000543462 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
VEGFB-204ENST00000543462 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
VEGFB-204ENST00000543462 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
VEGFB-204ENST00000543462 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
VEGFB-204ENST00000543462 BCL9O00512 1426 aa13.48□□□□□ -0.25
VEGFB-204ENST00000543462 DOT1LQ8TEK3 1739 aa13.48□□□□□ -0.25
VEGFB-204ENST00000543462 PPP2R1AP30153 589 aa13.48□□□□□ -0.25
VEGFB-204ENST00000543462 MTHFSP49914 203 aa13.48□□□□□ -0.25
VEGFB-204ENST00000543462 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
VEGFB-204ENST00000543462 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
VEGFB-204ENST00000543462 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
VEGFB-204ENST00000543462 CSB-PGBD3P0DP91 1061 aa13.47□□□□□ -0.25
VEGFB-204ENST00000543462 IL13P35225 146 aa13.47□□□□□ -0.25
VEGFB-204ENST00000543462 USP35Q9P2H5 1018 aa13.47□□□□□ -0.25
VEGFB-204ENST00000543462 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
VEGFB-204ENST00000543462 LTV1Q96GA3 475 aaPredicted RBP13.46□□□□□ -0.25
VEGFB-204ENST00000543462 EYA1Q99502 592 aa13.46□□□□□ -0.25
VEGFB-204ENST00000543462 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
VEGFB-204ENST00000543462 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
VEGFB-204ENST00000543462 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
VEGFB-204ENST00000543462 ITGB4P16144 1822 aa13.44□□□□□ -0.26
VEGFB-204ENST00000543462 RALBP1Q15311 655 aa13.44□□□□□ -0.26
VEGFB-204ENST00000543462 SCN11AQ9UI33 1791 aa13.43□□□□□ -0.26
VEGFB-204ENST00000543462 IL2RBP14784 551 aa13.43□□□□□ -0.26
VEGFB-204ENST00000543462 USHBP1Q8N6Y0 703 aa13.43□□□□□ -0.26
VEGFB-204ENST00000543462 PRKRIP1Q9H875 184 aaPredicted RBP13.43□□□□□ -0.26
VEGFB-204ENST00000543462 BTAF1O14981 1849 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms