RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 OVOS2A0A0J9YW53 1432 aa26.16■■□□□ 1.78
TMED3-204ENST00000543455 OVOS2Q6IE36 1432 aa26.16■■□□□ 1.78
TMED3-204ENST00000543455 TCP11L2Q8N4U5 519 aa26.16■■□□□ 1.78
TMED3-204ENST00000543455 PARP4Q9UKK3 1724 aaKnown RBP26.15■■□□□ 1.78
TMED3-204ENST00000543455 SLC24A1O60721 1099 aa26.15■■□□□ 1.78
TMED3-204ENST00000543455 DEFB132Q7Z7B7 95 aa26.15■■□□□ 1.78
TMED3-204ENST00000543455 LTN1O94822 1766 aa26.13■■□□□ 1.77
TMED3-204ENST00000543455 ABCC6O95255 1503 aa26.13■■□□□ 1.77
TMED3-204ENST00000543455 TMF1P82094 1093 aa26.13■■□□□ 1.77
TMED3-204ENST00000543455 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
TMED3-204ENST00000543455 WNK3Q9BYP7 1800 aa26.13■■□□□ 1.77
TMED3-204ENST00000543455 TNS1Q9HBL0 1735 aaKnown RBP26.13■■□□□ 1.77
TMED3-204ENST00000543455 THRAP3Q9Y2W1 955 aaKnown RBP26.12■■□□□ 1.77
TMED3-204ENST00000543455 RGPD1P0DJD0 1748 aa26.12■■□□□ 1.77
TMED3-204ENST00000543455 MYOM1P52179 1685 aa26.12■■□□□ 1.77
TMED3-204ENST00000543455 WDR17Q8IZU2 1322 aa26.11■■□□□ 1.77
TMED3-204ENST00000543455 ANKRD36BQ8N2N9 1353 aa26.11■■□□□ 1.77
TMED3-204ENST00000543455 LRRC37A3O60309 1634 aa26.08■■□□□ 1.77
TMED3-204ENST00000543455 TOM1L2Q6ZVM7 507 aa26.07■■□□□ 1.76
TMED3-204ENST00000543455 SF3B2Q13435 895 aaKnown RBP26.05■■□□□ 1.76
TMED3-204ENST00000543455 PEAK1Q9H792 1746 aa26.05■■□□□ 1.76
TMED3-204ENST00000543455 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
TMED3-204ENST00000543455 FAM196AQ6ZSG2 479 aa26.03■■□□□ 1.76
TMED3-204ENST00000543455 PDE3BQ13370 1112 aa26.02■■□□□ 1.76
TMED3-204ENST00000543455 CARD10Q9BWT7 1032 aa26.02■■□□□ 1.76
TMED3-204ENST00000543455 ERBB3P21860 1342 aa26.01■■□□□ 1.75
TMED3-204ENST00000543455 TRIM37O94972 964 aa25.99■■□□□ 1.75
TMED3-204ENST00000543455 BAG6P46379 1132 aa25.99■■□□□ 1.75
TMED3-204ENST00000543455 CDCA8Q53HL2 280 aa25.99■■□□□ 1.75
TMED3-204ENST00000543455 KIF20BQ96Q89 1820 aa25.99■■□□□ 1.75
TMED3-204ENST00000543455 FYB1O15117 783 aa25.98■■□□□ 1.75
TMED3-204ENST00000543455 CSB-PGBD3P0DP91 1061 aa25.98■■□□□ 1.75
TMED3-204ENST00000543455 FBLN1P23142 703 aa25.98■■□□□ 1.75
TMED3-204ENST00000543455 EN1Q05925 392 aaPredicted RBP25.98■■□□□ 1.75
TMED3-204ENST00000543455 SBF2Q86WG5 1849 aa25.97■■□□□ 1.75
TMED3-204ENST00000543455 COG3Q96JB2 828 aa25.97■■□□□ 1.75
TMED3-204ENST00000543455 CARD14Q9BXL6 1004 aa25.97■■□□□ 1.75
TMED3-204ENST00000543455 CCDC7Q96M83 1385 aa25.95■■□□□ 1.75
TMED3-204ENST00000543455 HSPA5P11021 654 aaKnown RBP25.95■■□□□ 1.74
TMED3-204ENST00000543455 DDB1Q16531 1140 aa25.95■■□□□ 1.74
TMED3-204ENST00000543455 GGNBP2Q9H3C7 697 aa25.95■■□□□ 1.74
TMED3-204ENST00000543455 SRCAPQ6ZRS2 3230 aa25.95■■□□□ 1.74
TMED3-204ENST00000543455 MAP3K19Q56UN5 1328 aa25.94■■□□□ 1.74
TMED3-204ENST00000543455 ANKRD24Q8TF21 1146 aa25.94■■□□□ 1.74
TMED3-204ENST00000543455 IP6K1Q92551 441 aa25.94■■□□□ 1.74
TMED3-204ENST00000543455 OVOS2A0A0G2JMS6 1433 aa25.93■■□□□ 1.74
TMED3-204ENST00000543455 MARCH10Q8NA82 808 aaPredicted RBP25.92■■□□□ 1.74
TMED3-204ENST00000543455 CDCA7Q9BWT1 371 aaPredicted RBP25.92■■□□□ 1.74
TMED3-204ENST00000543455 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
TMED3-204ENST00000543455 EIF4G2P78344 907 aaKnown RBP eCLIP25.91■■□□□ 1.74
TMED3-204ENST00000543455 CAMKK2Q96RR4 588 aa25.91■■□□□ 1.74
TMED3-204ENST00000543455 EZH2Q15910 746 aaKnown RBP25.91■■□□□ 1.74
TMED3-204ENST00000543455 NLRP2Q9NX02 1062 aa25.91■■□□□ 1.74
TMED3-204ENST00000543455 RGPD2P0DJD1 1756 aa25.9■■□□□ 1.74
TMED3-204ENST00000543455 RREB1Q92766 1687 aa25.9■■□□□ 1.74
TMED3-204ENST00000543455 FAM208AQ9UK61 1670 aaKnown RBP25.9■■□□□ 1.74
TMED3-204ENST00000543455 HOXC9P31274 260 aa25.89■■□□□ 1.73
TMED3-204ENST00000543455 TNS2Q63HR2 1409 aa25.89■■□□□ 1.73
TMED3-204ENST00000543455 APBA3O96018 575 aa25.88■■□□□ 1.73
TMED3-204ENST00000543455 RRS1Q15050 365 aaKnown RBP25.88■■□□□ 1.73
TMED3-204ENST00000543455 BCL9O00512 1426 aa25.88■■□□□ 1.73
TMED3-204ENST00000543455 PTF1AQ7RTS3 328 aa25.86■■□□□ 1.73
TMED3-204ENST00000543455 NUP188Q5SRE5 1749 aa25.86■■□□□ 1.73
TMED3-204ENST00000543455 LTV1Q96GA3 475 aaPredicted RBP25.85■■□□□ 1.73
TMED3-204ENST00000543455 RTL1A6NKG5 1358 aa25.84■■□□□ 1.73
TMED3-204ENST00000543455 C11orf95C9JLR9 678 aaPredicted RBP25.84■■□□□ 1.73
TMED3-204ENST00000543455 EXOC5O00471 708 aa25.84■■□□□ 1.73
TMED3-204ENST00000543455 AMPHP49418 695 aa25.83■■□□□ 1.73
TMED3-204ENST00000543455 PARD3Q8TEW0 1356 aa25.83■■□□□ 1.72
TMED3-204ENST00000543455 IL2RBP14784 551 aa25.82■■□□□ 1.72
TMED3-204ENST00000543455 RGPD3A6NKT7 1758 aaPredicted RBP25.81■■□□□ 1.72
TMED3-204ENST00000543455 RGPD4Q7Z3J3 1758 aa25.81■■□□□ 1.72
TMED3-204ENST00000543455 PSDA5PKW4 1024 aaPredicted RBP25.81■■□□□ 1.72
TMED3-204ENST00000543455 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
TMED3-204ENST00000543455 ANKRD26Q9UPS8 1709 aa25.79■■□□□ 1.72
TMED3-204ENST00000543455 BCL11BQ9C0K0 894 aaPredicted RBP25.78■■□□□ 1.72
TMED3-204ENST00000543455 SHANK3Q9BYB0 1731 aa25.77■■□□□ 1.72
TMED3-204ENST00000543455 NHSQ6T4R5 1651 aa25.77■■□□□ 1.72
TMED3-204ENST00000543455 INSRP06213 1382 aa25.75■■□□□ 1.71
TMED3-204ENST00000543455 CGNL1Q0VF96 1302 aa25.75■■□□□ 1.71
TMED3-204ENST00000543455 R3HDM1Q15032 1099 aaKnown RBP25.75■■□□□ 1.71
TMED3-204ENST00000543455 HSP90AB2PQ58FF8 381 aa25.75■■□□□ 1.71
TMED3-204ENST00000543455 EMILIN1Q9Y6C2 1016 aa25.75■■□□□ 1.71
TMED3-204ENST00000543455 MAP2P11137 1827 aaKnown RBP25.75■■□□□ 1.71
TMED3-204ENST00000543455 MEGF6O75095 1541 aa25.75■■□□□ 1.71
TMED3-204ENST00000543455 FLT4P35916 1363 aa25.75■■□□□ 1.71
TMED3-204ENST00000543455 NBPF6Q5VWK0 638 aa25.74■■□□□ 1.71
TMED3-204ENST00000543455 NBPF4Q96M43 638 aa25.74■■□□□ 1.71
TMED3-204ENST00000543455 KIF24Q5T7B8 1368 aa25.74■■□□□ 1.71
TMED3-204ENST00000543455 PLSCR1O15162 318 aa25.73■■□□□ 1.71
TMED3-204ENST00000543455 KCNQ2O43526 872 aa25.73■■□□□ 1.71
TMED3-204ENST00000543455 LRP5O75197 1615 aa25.73■■□□□ 1.71
TMED3-204ENST00000543455 PANK3Q9H999 370 aa25.72■■□□□ 1.71
TMED3-204ENST00000543455 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
TMED3-204ENST00000543455 PROM2Q8N271 834 aa25.7■■□□□ 1.7
TMED3-204ENST00000543455 ACSBG1Q96GR2 724 aa25.69■■□□□ 1.7
TMED3-204ENST00000543455 SMG6Q86US8 1419 aaKnown RBP25.69■■□□□ 1.7
TMED3-204ENST00000543455 BTAF1O14981 1849 aa25.68■■□□□ 1.7
TMED3-204ENST00000543455 KAT6BQ8WYB5 2073 aa25.68■■□□□ 1.7
TMED3-204ENST00000543455 POLKQ9UBT6 870 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms