RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 BCL9O00512 1426 aa18.13■□□□□ 0.49
CACNA2D4-216ENST00000543405 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
CACNA2D4-216ENST00000543405 PROM2Q8N271 834 aa18.11■□□□□ 0.49
CACNA2D4-216ENST00000543405 USP6P35125 1406 aa18.11■□□□□ 0.49
CACNA2D4-216ENST00000543405 AKAP12Q02952 1782 aa18.11■□□□□ 0.49
CACNA2D4-216ENST00000543405 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
CACNA2D4-216ENST00000543405 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
CACNA2D4-216ENST00000543405 KCNA4P22459 653 aa18.09■□□□□ 0.49
CACNA2D4-216ENST00000543405 DDB1Q16531 1140 aa18.09■□□□□ 0.49
CACNA2D4-216ENST00000543405 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
CACNA2D4-216ENST00000543405 FHDC1Q9C0D6 1143 aaPredicted RBP18.08■□□□□ 0.48
CACNA2D4-216ENST00000543405 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
CACNA2D4-216ENST00000543405 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
CACNA2D4-216ENST00000543405 CHD4Q14839 1912 aa18.06■□□□□ 0.48
CACNA2D4-216ENST00000543405 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
CACNA2D4-216ENST00000543405 NBPF1Q3BBV0 1214 aa18.06■□□□□ 0.48
CACNA2D4-216ENST00000543405 MARCH10Q8NA82 808 aaPredicted RBP18.06■□□□□ 0.48
CACNA2D4-216ENST00000543405 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
CACNA2D4-216ENST00000543405 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
CACNA2D4-216ENST00000543405 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
CACNA2D4-216ENST00000543405 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
CACNA2D4-216ENST00000543405 CABP2Q9NPB3 220 aa18.05■□□□□ 0.48
CACNA2D4-216ENST00000543405 RGPD5Q99666 1765 aa18.04■□□□□ 0.48
CACNA2D4-216ENST00000543405 CENPJQ9HC77 1338 aaPredicted RBP18.04■□□□□ 0.48
CACNA2D4-216ENST00000543405 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
CACNA2D4-216ENST00000543405 TOM1L2Q6ZVM7 507 aa18.04■□□□□ 0.48
CACNA2D4-216ENST00000543405 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
CACNA2D4-216ENST00000543405 NLRP6P59044 892 aa18.03■□□□□ 0.48
CACNA2D4-216ENST00000543405 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
CACNA2D4-216ENST00000543405 STK32BQ9NY57 414 aa18.03■□□□□ 0.48
CACNA2D4-216ENST00000543405 AXIN2Q9Y2T1 843 aa18.03■□□□□ 0.48
CACNA2D4-216ENST00000543405 TRPM1Q7Z4N2 1603 aa18.02■□□□□ 0.48
CACNA2D4-216ENST00000543405 SLC15A2Q16348 729 aa18.02■□□□□ 0.48
CACNA2D4-216ENST00000543405 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.48
CACNA2D4-216ENST00000543405 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
CACNA2D4-216ENST00000543405 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
CACNA2D4-216ENST00000543405 NHSQ6T4R5 1651 aa18.01■□□□□ 0.47
CACNA2D4-216ENST00000543405 NFAT5O94916 1531 aa18.01■□□□□ 0.47
CACNA2D4-216ENST00000543405 ABCC6O95255 1503 aa18.01■□□□□ 0.47
CACNA2D4-216ENST00000543405 MAP3K5Q99683 1374 aa18■□□□□ 0.47
CACNA2D4-216ENST00000543405 TNS2Q63HR2 1409 aa17.99■□□□□ 0.47
CACNA2D4-216ENST00000543405 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
CACNA2D4-216ENST00000543405 CARD10Q9BWT7 1032 aa17.99■□□□□ 0.47
CACNA2D4-216ENST00000543405 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
CACNA2D4-216ENST00000543405 ARXQ96QS3 562 aa17.96■□□□□ 0.47
CACNA2D4-216ENST00000543405 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
CACNA2D4-216ENST00000543405 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
CACNA2D4-216ENST00000543405 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
CACNA2D4-216ENST00000543405 CCDC7Q96M83 1385 aa17.94■□□□□ 0.46
CACNA2D4-216ENST00000543405 KCNH5Q8NCM2 988 aa17.94■□□□□ 0.46
CACNA2D4-216ENST00000543405 CEP350Q5VT06 3117 aa17.94■□□□□ 0.46
CACNA2D4-216ENST00000543405 MON2Q7Z3U7 1717 aa17.93■□□□□ 0.46
CACNA2D4-216ENST00000543405 BTAF1O14981 1849 aa17.93■□□□□ 0.46
CACNA2D4-216ENST00000543405 SHANK3Q9BYB0 1731 aa17.92■□□□□ 0.46
CACNA2D4-216ENST00000543405 TTC21AQ8NDW8 1320 aa17.92■□□□□ 0.46
CACNA2D4-216ENST00000543405 EXOC5O00471 708 aa17.91■□□□□ 0.46
CACNA2D4-216ENST00000543405 CSB-PGBD3P0DP91 1061 aa17.91■□□□□ 0.46
CACNA2D4-216ENST00000543405 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
CACNA2D4-216ENST00000543405 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
CACNA2D4-216ENST00000543405 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
CACNA2D4-216ENST00000543405 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
CACNA2D4-216ENST00000543405 QSER1Q2KHR3 1735 aa17.9■□□□□ 0.46
CACNA2D4-216ENST00000543405 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
CACNA2D4-216ENST00000543405 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
CACNA2D4-216ENST00000543405 SOX12O15370 315 aa17.89■□□□□ 0.45
CACNA2D4-216ENST00000543405 ACSBG1Q96GR2 724 aa17.89■□□□□ 0.45
CACNA2D4-216ENST00000543405 GPR162Q16538 588 aa17.88■□□□□ 0.45
CACNA2D4-216ENST00000543405 LTN1O94822 1766 aa17.87■□□□□ 0.45
CACNA2D4-216ENST00000543405 ERBB3P21860 1342 aa17.87■□□□□ 0.45
CACNA2D4-216ENST00000543405 USP31Q70CQ4 1352 aa17.87■□□□□ 0.45
CACNA2D4-216ENST00000543405 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
CACNA2D4-216ENST00000543405 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
CACNA2D4-216ENST00000543405 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
CACNA2D4-216ENST00000543405 KLHL34Q8N239 644 aa17.84■□□□□ 0.45
CACNA2D4-216ENST00000543405 CD163L1Q9NR16 1453 aa17.83■□□□□ 0.45
CACNA2D4-216ENST00000543405 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
CACNA2D4-216ENST00000543405 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
CACNA2D4-216ENST00000543405 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
CACNA2D4-216ENST00000543405 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
CACNA2D4-216ENST00000543405 IL2RBP14784 551 aa17.81■□□□□ 0.44
CACNA2D4-216ENST00000543405 L3MBTL2Q969R5 705 aa17.81■□□□□ 0.44
CACNA2D4-216ENST00000543405 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
CACNA2D4-216ENST00000543405 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
CACNA2D4-216ENST00000543405 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
CACNA2D4-216ENST00000543405 POLD1P28340 1107 aa17.79■□□□□ 0.44
CACNA2D4-216ENST00000543405 SLC16A10Q8TF71 515 aa17.79■□□□□ 0.44
CACNA2D4-216ENST00000543405 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
CACNA2D4-216ENST00000543405 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
CACNA2D4-216ENST00000543405 LY75O60449 1722 aa17.78■□□□□ 0.44
CACNA2D4-216ENST00000543405 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.44
CACNA2D4-216ENST00000543405 NME9Q86XW9 330 aa17.77■□□□□ 0.44
CACNA2D4-216ENST00000543405 ANKRD24Q8TF21 1146 aa17.77■□□□□ 0.44
CACNA2D4-216ENST00000543405 DOT1LQ8TEK3 1739 aa17.77■□□□□ 0.44
CACNA2D4-216ENST00000543405 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
CACNA2D4-216ENST00000543405 SLC27A3Q5K4L6 730 aa17.76■□□□□ 0.43
CACNA2D4-216ENST00000543405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNA2D4-216ENST00000543405 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
CACNA2D4-216ENST00000543405 KCNQ4P56696 695 aa17.74■□□□□ 0.43
CACNA2D4-216ENST00000543405 NSD2O96028 1365 aa17.74■□□□□ 0.43
CACNA2D4-216ENST00000543405 TFCP2L1Q9NZI6 479 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms