RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 DLL1O00548 723 aa9.78□□□□□ -0.84
CIT-213ENST00000543324 PRDM11Q9NQV5 511 aa9.78□□□□□ -0.84
CIT-213ENST00000543324 BCL9O00512 1426 aa9.78□□□□□ -0.84
CIT-213ENST00000543324 SSH2Q76I76 1423 aa9.78□□□□□ -0.84
CIT-213ENST00000543324 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
CIT-213ENST00000543324 PXDNLA1KZ92 1463 aa9.78□□□□□ -0.84
CIT-213ENST00000543324 NRXN1Q9ULB1 1477 aa9.78□□□□□ -0.84
CIT-213ENST00000543324 TCP11L2Q8N4U5 519 aa9.77□□□□□ -0.85
CIT-213ENST00000543324 RGPD8O14715 1765 aaPredicted RBP9.77□□□□□ -0.85
CIT-213ENST00000543324 LBX1P52954 281 aa9.76□□□□□ -0.85
CIT-213ENST00000543324 SMC1BQ8NDV3 1235 aa9.76□□□□□ -0.85
CIT-213ENST00000543324 TUBGCP6Q96RT7 1819 aa9.76□□□□□ -0.85
CIT-213ENST00000543324 PPLO60437 1756 aa9.75□□□□□ -0.85
CIT-213ENST00000543324 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
CIT-213ENST00000543324 IFT172Q9UG01 1749 aa9.75□□□□□ -0.85
CIT-213ENST00000543324 PITPNM2Q9BZ72 1349 aa9.75□□□□□ -0.85
CIT-213ENST00000543324 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
CIT-213ENST00000543324 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
CIT-213ENST00000543324 PNPLA7Q6ZV29 1317 aa9.74□□□□□ -0.85
CIT-213ENST00000543324 NUP155O75694 1391 aa9.74□□□□□ -0.85
CIT-213ENST00000543324 KIAA0232Q92628 1395 aa9.74□□□□□ -0.85
CIT-213ENST00000543324 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
CIT-213ENST00000543324 AKAP12Q02952 1782 aa9.73□□□□□ -0.85
CIT-213ENST00000543324 AIDAQ96BJ3 306 aa9.73□□□□□ -0.85
CIT-213ENST00000543324 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
CIT-213ENST00000543324 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
CIT-213ENST00000543324 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
CIT-213ENST00000543324 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
CIT-213ENST00000543324 HSPA8P11142 646 aaKnown RBP9.7□□□□□ -0.86
CIT-213ENST00000543324 KCPQ6ZWJ8 1503 aa9.7□□□□□ -0.86
CIT-213ENST00000543324 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
CIT-213ENST00000543324 PKD1L3Q7Z443 1732 aa9.69□□□□□ -0.86
CIT-213ENST00000543324 PPARGC1BQ86YN6 1023 aaKnown RBP9.69□□□□□ -0.86
CIT-213ENST00000543324 IGSF1Q8N6C5 1336 aa9.69□□□□□ -0.86
CIT-213ENST00000543324 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
CIT-213ENST00000543324 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
CIT-213ENST00000543324 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
CIT-213ENST00000543324 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
CIT-213ENST00000543324 VIRMAQ69YN4 1812 aaKnown RBP9.68□□□□□ -0.86
CIT-213ENST00000543324 PLEKHG2Q9H7P9 1386 aa9.68□□□□□ -0.86
CIT-213ENST00000543324 EVA1CP58658 441 aa9.68□□□□□ -0.86
CIT-213ENST00000543324 DDB1Q16531 1140 aa9.68□□□□□ -0.86
CIT-213ENST00000543324 MARCH10Q8NA82 808 aaPredicted RBP9.68□□□□□ -0.86
CIT-213ENST00000543324 WBP1LQ9NX94 342 aa9.68□□□□□ -0.86
CIT-213ENST00000543324 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
CIT-213ENST00000543324 LRRC4BQ9NT99 713 aa9.67□□□□□ -0.86
CIT-213ENST00000543324 KDM2BQ8NHM5 1336 aa9.66□□□□□ -0.86
CIT-213ENST00000543324 KNDC1Q76NI1 1749 aa9.66□□□□□ -0.86
CIT-213ENST00000543324 ITGAEP38570 1179 aa9.66□□□□□ -0.86
CIT-213ENST00000543324 ZNF326Q5BKZ1 582 aaKnown RBP9.66□□□□□ -0.86
CIT-213ENST00000543324 PPP4R3CPQ6ZMV5 832 aa9.66□□□□□ -0.86
CIT-213ENST00000543324 GCC1Q96CN9 775 aa9.66□□□□□ -0.86
CIT-213ENST00000543324 RRAGCQ9HB90 399 aa9.66□□□□□ -0.86
CIT-213ENST00000543324 CNTNAP1P78357 1384 aa9.65□□□□□ -0.86
CIT-213ENST00000543324 CREBZFQ9NS37 354 aa9.65□□□□□ -0.86
CIT-213ENST00000543324 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
CIT-213ENST00000543324 TRPM1Q7Z4N2 1603 aa9.64□□□□□ -0.87
CIT-213ENST00000543324 BTAF1O14981 1849 aa9.63□□□□□ -0.87
CIT-213ENST00000543324 HABP4Q5JVS0 413 aaKnown RBP9.63□□□□□ -0.87
CIT-213ENST00000543324 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
CIT-213ENST00000543324 COL5A2P05997 1499 aaPredicted RBP9.63□□□□□ -0.87
CIT-213ENST00000543324 CRB1P82279 1406 aa9.63□□□□□ -0.87
CIT-213ENST00000543324 SPATA31E1Q6ZUB1 1445 aa9.63□□□□□ -0.87
CIT-213ENST00000543324 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
CIT-213ENST00000543324 TFCP2L1Q9NZI6 479 aa9.62□□□□□ -0.87
CIT-213ENST00000543324 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
CIT-213ENST00000543324 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
CIT-213ENST00000543324 MSL1Q68DK7 614 aa9.6□□□□□ -0.87
CIT-213ENST00000543324 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
CIT-213ENST00000543324 ANKRD30BQ9BXX2 1392 aa9.6□□□□□ -0.87
CIT-213ENST00000543324 VEGFBP49765 207 aa9.59□□□□□ -0.87
CIT-213ENST00000543324 C9orf131Q5VYM1 1079 aa9.59□□□□□ -0.87
CIT-213ENST00000543324 MPNDQ8N594 471 aa9.59□□□□□ -0.87
CIT-213ENST00000543324 MCOLN1Q9GZU1 580 aa9.59□□□□□ -0.87
CIT-213ENST00000543324 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
CIT-213ENST00000543324 FXR1P51114 621 aaKnown RBP eCLIP9.58□□□□□ -0.88
CIT-213ENST00000543324 HIRIP3Q9BW71 556 aaPredicted RBP9.58□□□□□ -0.88
CIT-213ENST00000543324 KIAA1551Q9HCM1 1747 aa9.58□□□□□ -0.88
CIT-213ENST00000543324 GPRASP1Q5JY77 1395 aa9.58□□□□□ -0.88
CIT-213ENST00000543324 ACIN1Q9UKV3 1341 aaKnown RBP9.57□□□□□ -0.88
CIT-213ENST00000543324 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
CIT-213ENST00000543324 COL23A1Q86Y22 540 aaPredicted RBP9.57□□□□□ -0.88
CIT-213ENST00000543324 CPDO75976 1380 aa9.57□□□□□ -0.88
CIT-213ENST00000543324 COL18A1P39060 1754 aa9.57□□□□□ -0.88
CIT-213ENST00000543324 RPGRIP1LQ68CZ1 1315 aa9.56□□□□□ -0.88
CIT-213ENST00000543324 PIK3C2GO75747 1445 aa9.56□□□□□ -0.88
CIT-213ENST00000543324 ANKARQ7Z5J8 1434 aa9.56□□□□□ -0.88
CIT-213ENST00000543324 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
CIT-213ENST00000543324 SLC17A8Q8NDX2 589 aa9.56□□□□□ -0.88
CIT-213ENST00000543324 SLC4A1APQ9BWU0 796 aaKnown RBP9.56□□□□□ -0.88
CIT-213ENST00000543324 USP6P35125 1406 aa9.56□□□□□ -0.88
CIT-213ENST00000543324 VGFO15240 615 aaPredicted RBP9.55□□□□□ -0.88
CIT-213ENST00000543324 ABCC11Q96J66 1382 aa9.54□□□□□ -0.88
CIT-213ENST00000543324 SOX10P56693 466 aa9.54□□□□□ -0.88
CIT-213ENST00000543324 MAP2K1Q02750 393 aaPredicted RBP9.54□□□□□ -0.88
CIT-213ENST00000543324 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
CIT-213ENST00000543324 THSD7BQ9C0I4 1608 aa9.53□□□□□ -0.88
CIT-213ENST00000543324 VEGFAP15692 232 aaPredicted RBP9.53□□□□□ -0.88
CIT-213ENST00000543324 ACSBG1Q96GR2 724 aa9.53□□□□□ -0.88
CIT-213ENST00000543324 KIF13BQ9NQT8 1826 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms