RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
CIT-212ENST00000543239 AXIN2Q9Y2T1 843 aa22.54■■□□□ 1.2
CIT-212ENST00000543239 A0A0G2JS52 829 aa22.53■■□□□ 1.2
CIT-212ENST00000543239 MYT1Q01538 1121 aa22.53■■□□□ 1.2
CIT-212ENST00000543239 BARGINQ6ZT62 677 aa22.53■■□□□ 1.2
CIT-212ENST00000543239 FYB1O15117 783 aa22.52■■□□□ 1.2
CIT-212ENST00000543239 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
CIT-212ENST00000543239 LTN1O94822 1766 aa22.52■■□□□ 1.2
CIT-212ENST00000543239 WDR17Q8IZU2 1322 aa22.52■■□□□ 1.2
CIT-212ENST00000543239 KIF20BQ96Q89 1820 aa22.52■■□□□ 1.2
CIT-212ENST00000543239 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
CIT-212ENST00000543239 KRT27Q7Z3Y8 459 aa22.51■■□□□ 1.19
CIT-212ENST00000543239 TCP11L2Q8N4U5 519 aa22.51■■□□□ 1.19
CIT-212ENST00000543239 POLR3GLQ9BT43 218 aa22.51■■□□□ 1.19
CIT-212ENST00000543239 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
CIT-212ENST00000543239 USP35Q9P2H5 1018 aa22.5■■□□□ 1.19
CIT-212ENST00000543239 RGPD5Q99666 1765 aa22.49■■□□□ 1.19
CIT-212ENST00000543239 GGNBP2Q9H3C7 697 aa22.49■■□□□ 1.19
CIT-212ENST00000543239 TOM1L2Q6ZVM7 507 aa22.47■■□□□ 1.19
CIT-212ENST00000543239 BLMP54132 1417 aaPredicted RBP22.47■■□□□ 1.19
CIT-212ENST00000543239 EP400Q96L91 3159 aa22.46■■□□□ 1.19
CIT-212ENST00000543239 C11orf95C9JLR9 678 aaPredicted RBP22.46■■□□□ 1.19
CIT-212ENST00000543239 CCDC125Q86Z20 511 aa22.46■■□□□ 1.19
CIT-212ENST00000543239 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
CIT-212ENST00000543239 CSB-PGBD3P0DP91 1061 aa22.45■■□□□ 1.18
CIT-212ENST00000543239 ERBB3P21860 1342 aa22.45■■□□□ 1.18
CIT-212ENST00000543239 IP6K1Q92551 441 aa22.44■■□□□ 1.18
CIT-212ENST00000543239 CARD10Q9BWT7 1032 aa22.44■■□□□ 1.18
CIT-212ENST00000543239 PARP4Q9UKK3 1724 aaKnown RBP22.44■■□□□ 1.18
CIT-212ENST00000543239 RTL1A6NKG5 1358 aa22.43■■□□□ 1.18
CIT-212ENST00000543239 MAP3K19Q56UN5 1328 aa22.43■■□□□ 1.18
CIT-212ENST00000543239 CCDC7Q96M83 1385 aa22.42■■□□□ 1.18
CIT-212ENST00000543239 KIF7Q2M1P5 1343 aa22.42■■□□□ 1.18
CIT-212ENST00000543239 WNK3Q9BYP7 1800 aa22.41■■□□□ 1.18
CIT-212ENST00000543239 CDCA7Q9BWT1 371 aaPredicted RBP22.41■■□□□ 1.18
CIT-212ENST00000543239 PANK3Q9H999 370 aa22.41■■□□□ 1.18
CIT-212ENST00000543239 ANKRD24Q8TF21 1146 aa22.4■■□□□ 1.18
CIT-212ENST00000543239 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.18
CIT-212ENST00000543239 HOXC9P31274 260 aa22.39■■□□□ 1.17
CIT-212ENST00000543239 AMPHP49418 695 aa22.39■■□□□ 1.17
CIT-212ENST00000543239 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
CIT-212ENST00000543239 FBLN1P23142 703 aa22.38■■□□□ 1.17
CIT-212ENST00000543239 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
CIT-212ENST00000543239 LRRC37A3O60309 1634 aa22.38■■□□□ 1.17
CIT-212ENST00000543239 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
CIT-212ENST00000543239 PDE3BQ13370 1112 aa22.37■■□□□ 1.17
CIT-212ENST00000543239 RRS1Q15050 365 aaKnown RBP22.37■■□□□ 1.17
CIT-212ENST00000543239 NSD2O96028 1365 aa22.37■■□□□ 1.17
CIT-212ENST00000543239 NLRP2Q9NX02 1062 aa22.36■■□□□ 1.17
CIT-212ENST00000543239 DDB1Q16531 1140 aa22.34■■□□□ 1.17
CIT-212ENST00000543239 FAM182BQ5T319 152 aa22.34■■□□□ 1.17
CIT-212ENST00000543239 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
CIT-212ENST00000543239 FLT4P35916 1363 aa22.34■■□□□ 1.17
CIT-212ENST00000543239 SF3B2Q13435 895 aaKnown RBP22.33■■□□□ 1.17
CIT-212ENST00000543239 RGPD1P0DJD0 1748 aa22.32■■□□□ 1.16
CIT-212ENST00000543239 PEAK1Q9H792 1746 aa22.32■■□□□ 1.16
CIT-212ENST00000543239 INSRP06213 1382 aa22.32■■□□□ 1.16
CIT-212ENST00000543239 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
CIT-212ENST00000543239 KNSTRNQ9Y448 316 aa22.31■■□□□ 1.16
CIT-212ENST00000543239 LTV1Q96GA3 475 aaPredicted RBP22.3■■□□□ 1.16
CIT-212ENST00000543239 OVOS2A0A0G2JMS6 1433 aa22.3■■□□□ 1.16
CIT-212ENST00000543239 TNS2Q63HR2 1409 aa22.3■■□□□ 1.16
CIT-212ENST00000543239 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
CIT-212ENST00000543239 IL2RBP14784 551 aa22.29■■□□□ 1.16
CIT-212ENST00000543239 EMILIN1Q9Y6C2 1016 aa22.29■■□□□ 1.16
CIT-212ENST00000543239 EXOC5O00471 708 aa22.27■■□□□ 1.16
CIT-212ENST00000543239 HSP90AB2PQ58FF8 381 aa22.27■■□□□ 1.16
CIT-212ENST00000543239 TNS1Q9HBL0 1735 aaKnown RBP22.27■■□□□ 1.16
CIT-212ENST00000543239 BCL9O00512 1426 aa22.26■■□□□ 1.15
CIT-212ENST00000543239 BAG6P46379 1132 aa22.26■■□□□ 1.15
CIT-212ENST00000543239 MAP2P11137 1827 aaKnown RBP22.25■■□□□ 1.15
CIT-212ENST00000543239 POLKQ9UBT6 870 aa22.25■■□□□ 1.15
CIT-212ENST00000543239 AMER1Q5JTC6 1135 aaPredicted RBP22.24■■□□□ 1.15
CIT-212ENST00000543239 RGPD2P0DJD1 1756 aa22.23■■□□□ 1.15
CIT-212ENST00000543239 PPM1GO15355 546 aaPredicted RBP22.23■■□□□ 1.15
CIT-212ENST00000543239 PER1O15534 1290 aaPredicted RBP22.23■■□□□ 1.15
CIT-212ENST00000543239 TRIM37O94972 964 aa22.23■■□□□ 1.15
CIT-212ENST00000543239 NBPF6Q5VWK0 638 aa22.23■■□□□ 1.15
CIT-212ENST00000543239 DEFB132Q7Z7B7 95 aa22.23■■□□□ 1.15
CIT-212ENST00000543239 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
CIT-212ENST00000543239 MARCH10Q8NA82 808 aaPredicted RBP22.23■■□□□ 1.15
CIT-212ENST00000543239 NBPF4Q96M43 638 aa22.23■■□□□ 1.15
CIT-212ENST00000543239 TNNT2P45379 298 aaPredicted RBP22.22■■□□□ 1.15
CIT-212ENST00000543239 NPC1L1Q9UHC9 1359 aa22.19■■□□□ 1.14
CIT-212ENST00000543239 SBF2Q86WG5 1849 aa22.19■■□□□ 1.14
CIT-212ENST00000543239 MEGF6O75095 1541 aa22.18■■□□□ 1.14
CIT-212ENST00000543239 NCAPD2Q15021 1401 aa22.18■■□□□ 1.14
CIT-212ENST00000543239 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
CIT-212ENST00000543239 APBA3O96018 575 aa22.16■■□□□ 1.14
CIT-212ENST00000543239 EN1Q05925 392 aaPredicted RBP22.16■■□□□ 1.14
CIT-212ENST00000543239 USHBP1Q8N6Y0 703 aa22.16■■□□□ 1.14
CIT-212ENST00000543239 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
CIT-212ENST00000543239 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
CIT-212ENST00000543239 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
CIT-212ENST00000543239 CAMKK2Q96RR4 588 aa22.13■■□□□ 1.13
CIT-212ENST00000543239 TATP17735 454 aaPredicted RBP22.12■■□□□ 1.13
CIT-212ENST00000543239 EIF4A2Q14240 407 aaKnown RBP22.12■■□□□ 1.13
CIT-212ENST00000543239 CC2D1BQ5T0F9 858 aaKnown RBP22.12■■□□□ 1.13
CIT-212ENST00000543239 RGPD3A6NKT7 1758 aaPredicted RBP22.12■■□□□ 1.13
CIT-212ENST00000543239 RGPD4Q7Z3J3 1758 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms