RNA–Protein interactions for RNA: ENST00000543054.5

TSG101-207, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-207ENST00000543054 DCAF1Q9Y4B6 1507 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 JUNDP17535 347 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 PNMA1Q8ND90 353 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 VRTNQ9H8Y1 702 aa8.05□□□□□ -1.12
TSG101-207ENST00000543054 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
TSG101-207ENST00000543054 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
TSG101-207ENST00000543054 RPIAP49247 311 aa8.04□□□□□ -1.12
TSG101-207ENST00000543054 PTPRNQ16849 979 aa8.04□□□□□ -1.12
TSG101-207ENST00000543054 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
TSG101-207ENST00000543054 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
TSG101-207ENST00000543054 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
TSG101-207ENST00000543054 USP17L5A8MUK1 530 aa8.03□□□□□ -1.12
TSG101-207ENST00000543054 ELOAQ14241 798 aaKnown RBP8.03□□□□□ -1.12
TSG101-207ENST00000543054 TMEM164Q5U3C3 297 aa8.03□□□□□ -1.12
TSG101-207ENST00000543054 NFATC2IPQ8NCF5 419 aa8.03□□□□□ -1.12
TSG101-207ENST00000543054 PKD2L1Q9P0L9 805 aa8.03□□□□□ -1.12
TSG101-207ENST00000543054 PLEKHM2Q8IWE5 1019 aa8.02□□□□□ -1.13
TSG101-207ENST00000543054 SLAIN2Q9P270 581 aa8.02□□□□□ -1.13
TSG101-207ENST00000543054 UNC13AQ9UPW8 1703 aa8.02□□□□□ -1.13
TSG101-207ENST00000543054 FMNL1O95466 1100 aaPredicted RBP8.01□□□□□ -1.13
TSG101-207ENST00000543054 PHLDB3Q6NSJ2 640 aa8.01□□□□□ -1.13
TSG101-207ENST00000543054 SND1Q7KZF4 910 aaKnown RBP eCLIP8.01□□□□□ -1.135e-6■■■■□ 22.5
TSG101-207ENST00000543054 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
TSG101-207ENST00000543054 PRDM9Q9NQV7 894 aa8.01□□□□□ -1.13
TSG101-207ENST00000543054 NACADO15069 1562 aa8.01□□□□□ -1.13
TSG101-207ENST00000543054 POTECB2RU33 542 aa8□□□□□ -1.13
TSG101-207ENST00000543054 DXOO77932 396 aaKnown RBP8□□□□□ -1.13
TSG101-207ENST00000543054 SKIP12755 728 aa8□□□□□ -1.13
TSG101-207ENST00000543054 CRTC2Q53ET0 693 aaPredicted RBP8□□□□□ -1.13
TSG101-207ENST00000543054 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
TSG101-207ENST00000543054 NOVA2Q9UNW9 492 aaKnown RBP8□□□□□ -1.13
TSG101-207ENST00000543054 GNEQ9Y223 722 aaKnown RBP8□□□□□ -1.13
TSG101-207ENST00000543054 FCF1Q9Y324 198 aaKnown RBP8□□□□□ -1.13
TSG101-207ENST00000543054 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
TSG101-207ENST00000543054 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L21D6R901 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 MSS51Q4VC12 460 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 CRIPAKQ8N1N5 446 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 RB1CC1Q8TDY2 1594 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 AAASQ9NRG9 546 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 SCRIBQ14160 1630 aa7.99□□□□□ -1.13
TSG101-207ENST00000543054 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
TSG101-207ENST00000543054 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
TSG101-207ENST00000543054 CCNYL3P0C7X3 344 aa7.98□□□□□ -1.13
TSG101-207ENST00000543054 CTHP32929 405 aa7.98□□□□□ -1.13
TSG101-207ENST00000543054 FOXC1Q12948 553 aa7.98□□□□□ -1.13
TSG101-207ENST00000543054 PHTF2Q8N3S3 785 aa7.98□□□□□ -1.13
TSG101-207ENST00000543054 CD2BP2O95400 341 aaKnown RBP7.97□□□□□ -1.13
TSG101-207ENST00000543054 MMP16P51512 607 aa7.97□□□□□ -1.13
TSG101-207ENST00000543054 NCOA4Q13772 614 aa7.97□□□□□ -1.13
TSG101-207ENST00000543054 TOR4AQ9NXH8 423 aa7.97□□□□□ -1.13
TSG101-207ENST00000543054 AVPP01185 164 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 RBM25P49756 843 aaKnown RBP7.96□□□□□ -1.14
TSG101-207ENST00000543054 FAM69CQ0P6D2 419 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 PTK7Q13308 1070 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 TXNDC2Q86VQ3 553 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 NUDT12Q9BQG2 462 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 EVA1BQ9NVM1 165 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 CEP126Q9P2H0 1117 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 GPSM3Q9Y4H4 160 aa7.96□□□□□ -1.14
TSG101-207ENST00000543054 MYO15BQ96JP2 1530 aa7.95□□□□□ -1.14
TSG101-207ENST00000543054 KCNH2Q12809 1159 aa7.95□□□□□ -1.14
TSG101-207ENST00000543054 PDXDC2PQ6P474 469 aa7.95□□□□□ -1.14
TSG101-207ENST00000543054 MKRN1Q9UHC7 482 aaKnown RBP7.95□□□□□ -1.14
TSG101-207ENST00000543054 CYP4X1Q8N118 509 aa7.94□□□□□ -1.14
TSG101-207ENST00000543054 PLPP7Q8NBV4 271 aa7.94□□□□□ -1.14
TSG101-207ENST00000543054 GPKOWQ92917 476 aaPredicted RBP eCLIP7.94□□□□□ -1.14
TSG101-207ENST00000543054 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
TSG101-207ENST00000543054 PTK2Q05397 1052 aa7.93□□□□□ -1.14
TSG101-207ENST00000543054 RNF135Q8IUD6 432 aa7.93□□□□□ -1.14
TSG101-207ENST00000543054 ADAM32Q8TC27 787 aa7.93□□□□□ -1.14
TSG101-207ENST00000543054 SSFA2P28290 1259 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
TSG101-207ENST00000543054 CTC1Q2NKJ3 1217 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 TSGA10IPQ3SY00 556 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 SLFNL1Q499Z3 407 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 NBPF14Q5TI25 921 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 B4GALNT3Q6L9W6 998 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 SH3BP5LQ7L8J4 393 aa7.92□□□□□ -1.14
TSG101-207ENST00000543054 ZBTB24O43167 697 aaPredicted RBP7.91□□□□□ -1.14
TSG101-207ENST00000543054 RASA1P20936 1047 aa7.91□□□□□ -1.14
TSG101-207ENST00000543054 CLDN10P78369 228 aa7.91□□□□□ -1.14
TSG101-207ENST00000543054 PTCRAQ6ISU1 281 aaPredicted RBP7.91□□□□□ -1.14
TSG101-207ENST00000543054 ARMC2Q8NEN0 867 aa7.91□□□□□ -1.14
TSG101-207ENST00000543054 CLP1Q92989 425 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms