RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 CDCA7Q9BWT1 371 aaPredicted RBP24.77■■□□□ 1.56
PPP1CA-210ENST00000542876 CARD11Q9BXL7 1154 aa24.77■■□□□ 1.56
PPP1CA-210ENST00000542876 AXIN2Q9Y2T1 843 aa24.77■■□□□ 1.56
PPP1CA-210ENST00000542876 PARP4Q9UKK3 1724 aaKnown RBP24.77■■□□□ 1.56
PPP1CA-210ENST00000542876 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
PPP1CA-210ENST00000542876 CARD10Q9BWT7 1032 aa24.72■■□□□ 1.55
PPP1CA-210ENST00000542876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.71■■□□□ 1.55
PPP1CA-210ENST00000542876 TMC1Q8TDI8 760 aa24.71■■□□□ 1.55
PPP1CA-210ENST00000542876 TONSLQ96HA7 1378 aa24.69■■□□□ 1.54
PPP1CA-210ENST00000542876 HDGFL2Q7Z4V5 671 aaPredicted RBP24.69■■□□□ 1.54
PPP1CA-210ENST00000542876 BCL11BQ9C0K0 894 aaPredicted RBP24.69■■□□□ 1.54
PPP1CA-210ENST00000542876 COL18A1P39060 1754 aa24.69■■□□□ 1.54
PPP1CA-210ENST00000542876 AKAP12Q02952 1782 aa24.69■■□□□ 1.54
PPP1CA-210ENST00000542876 RREB1Q92766 1687 aa24.69■■□□□ 1.54
PPP1CA-210ENST00000542876 PLSCR1O15162 318 aa24.68■■□□□ 1.54
PPP1CA-210ENST00000542876 LRRC37A3O60309 1634 aa24.68■■□□□ 1.54
PPP1CA-210ENST00000542876 EXOC5O00471 708 aa24.67■■□□□ 1.54
PPP1CA-210ENST00000542876 MARCH10Q8NA82 808 aaPredicted RBP24.67■■□□□ 1.54
PPP1CA-210ENST00000542876 CCDC7Q96M83 1385 aa24.67■■□□□ 1.54
PPP1CA-210ENST00000542876 NUP188Q5SRE5 1749 aa24.65■■□□□ 1.54
PPP1CA-210ENST00000542876 NFAT5O94916 1531 aa24.65■■□□□ 1.54
PPP1CA-210ENST00000542876 USP31Q70CQ4 1352 aa24.65■■□□□ 1.54
PPP1CA-210ENST00000542876 PEAK1Q9H792 1746 aa24.64■■□□□ 1.54
PPP1CA-210ENST00000542876 NME9Q86XW9 330 aa24.64■■□□□ 1.54
PPP1CA-210ENST00000542876 SPON1Q9HCB6 807 aa24.64■■□□□ 1.54
PPP1CA-210ENST00000542876 TERF2IPQ9NYB0 399 aa24.64■■□□□ 1.54
PPP1CA-210ENST00000542876 PPP1R1BQ9UD71 204 aaPredicted RBP24.63■■□□□ 1.53
PPP1CA-210ENST00000542876 BCL9O00512 1426 aa24.62■■□□□ 1.53
PPP1CA-210ENST00000542876 ABCC6O95255 1503 aa24.62■■□□□ 1.53
PPP1CA-210ENST00000542876 SLC12A5Q9H2X9 1139 aa24.62■■□□□ 1.53
PPP1CA-210ENST00000542876 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
PPP1CA-210ENST00000542876 KCNQ2O43526 872 aa24.6■■□□□ 1.53
PPP1CA-210ENST00000542876 PTF1AQ7RTS3 328 aa24.6■■□□□ 1.53
PPP1CA-210ENST00000542876 MON2Q7Z3U7 1717 aa24.6■■□□□ 1.53
PPP1CA-210ENST00000542876 PUS7Q96PZ0 661 aaKnown RBP24.59■■□□□ 1.53
PPP1CA-210ENST00000542876 EDC4Q6P2E9 1401 aaKnown RBP24.59■■□□□ 1.53
PPP1CA-210ENST00000542876 ERBB3P21860 1342 aa24.59■■□□□ 1.53
PPP1CA-210ENST00000542876 CD163L1Q9NR16 1453 aa24.58■■□□□ 1.53
PPP1CA-210ENST00000542876 WNK3Q9BYP7 1800 aa24.57■■□□□ 1.52
PPP1CA-210ENST00000542876 TNS2Q63HR2 1409 aa24.56■■□□□ 1.52
PPP1CA-210ENST00000542876 RGPD3A6NKT7 1758 aaPredicted RBP24.56■■□□□ 1.52
PPP1CA-210ENST00000542876 RGPD4Q7Z3J3 1758 aa24.56■■□□□ 1.52
PPP1CA-210ENST00000542876 RGPD5Q99666 1765 aa24.56■■□□□ 1.52
PPP1CA-210ENST00000542876 SLC24A1O60721 1099 aa24.55■■□□□ 1.52
PPP1CA-210ENST00000542876 IL2RBP14784 551 aa24.55■■□□□ 1.52
PPP1CA-210ENST00000542876 ANKRD24Q8TF21 1146 aa24.55■■□□□ 1.52
PPP1CA-210ENST00000542876 ANO8Q9HCE9 1232 aaPredicted RBP24.55■■□□□ 1.52
PPP1CA-210ENST00000542876 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
PPP1CA-210ENST00000542876 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
PPP1CA-210ENST00000542876 DCAF8L1A6NGE4 600 aa24.53■■□□□ 1.52
PPP1CA-210ENST00000542876 TXNRD1Q16881 649 aa24.53■■□□□ 1.52
PPP1CA-210ENST00000542876 PROM2Q8N271 834 aa24.53■■□□□ 1.52
PPP1CA-210ENST00000542876 STK32BQ9NY57 414 aa24.52■■□□□ 1.52
PPP1CA-210ENST00000542876 NINLQ9Y2I6 1382 aa24.52■■□□□ 1.52
PPP1CA-210ENST00000542876 USP54Q70EL1 1684 aa24.51■■□□□ 1.51
PPP1CA-210ENST00000542876 ST20-MTHFSA0A0A6YYL1 179 aa24.5■■□□□ 1.51
PPP1CA-210ENST00000542876 ACSBG1Q96GR2 724 aa24.5■■□□□ 1.51
PPP1CA-210ENST00000542876 COG3Q96JB2 828 aa24.49■■□□□ 1.51
PPP1CA-210ENST00000542876 IP6K1Q92551 441 aa24.48■■□□□ 1.51
PPP1CA-210ENST00000542876 TESK2Q96S53 571 aa24.48■■□□□ 1.51
PPP1CA-210ENST00000542876 ZBTB7AO95365 584 aa24.46■■□□□ 1.51
PPP1CA-210ENST00000542876 SLC15A2Q16348 729 aa24.46■■□□□ 1.51
PPP1CA-210ENST00000542876 LTV1Q96GA3 475 aaPredicted RBP24.46■■□□□ 1.51
PPP1CA-210ENST00000542876 LTN1O94822 1766 aa24.45■■□□□ 1.5
PPP1CA-210ENST00000542876 PDGFDQ9GZP0 370 aaPredicted RBP24.44■■□□□ 1.5
PPP1CA-210ENST00000542876 AMPHP49418 695 aa24.43■■□□□ 1.5
PPP1CA-210ENST00000542876 YY1P25490 414 aa24.41■■□□□ 1.5
PPP1CA-210ENST00000542876 TMF1P82094 1093 aa24.41■■□□□ 1.5
PPP1CA-210ENST00000542876 DDX54Q8TDD1 881 aaKnown RBP24.41■■□□□ 1.5
PPP1CA-210ENST00000542876 ATF5Q9Y2D1 282 aaPredicted RBP24.41■■□□□ 1.5
PPP1CA-210ENST00000542876 NHSQ6T4R5 1651 aa24.4■■□□□ 1.5
PPP1CA-210ENST00000542876 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.5
PPP1CA-210ENST00000542876 TRIM26Q12899 539 aaPredicted RBP24.39■■□□□ 1.49
PPP1CA-210ENST00000542876 ANKRD36BQ8N2N9 1353 aa24.39■■□□□ 1.49
PPP1CA-210ENST00000542876 CASZ1Q86V15 1759 aa24.39■■□□□ 1.49
PPP1CA-210ENST00000542876 HOXC9P31274 260 aa24.38■■□□□ 1.49
PPP1CA-210ENST00000542876 MTFR1LQ9H019 292 aa24.37■■□□□ 1.49
PPP1CA-210ENST00000542876 PTGER2P43116 358 aa24.36■■□□□ 1.49
PPP1CA-210ENST00000542876 USP47Q96K76 1375 aa24.35■■□□□ 1.49
PPP1CA-210ENST00000542876 CDCA8Q53HL2 280 aa24.35■■□□□ 1.49
PPP1CA-210ENST00000542876 FBLN1P23142 703 aa24.34■■□□□ 1.49
PPP1CA-210ENST00000542876 SYTL4Q96C24 671 aaPredicted RBP24.34■■□□□ 1.49
PPP1CA-210ENST00000542876 RTL1A6NKG5 1358 aa24.32■■□□□ 1.48
PPP1CA-210ENST00000542876 FAM208AQ9UK61 1670 aaKnown RBP24.32■■□□□ 1.48
PPP1CA-210ENST00000542876 SLC27A3Q5K4L6 730 aa24.32■■□□□ 1.48
PPP1CA-210ENST00000542876 ZCRB1Q8TBF4 217 aaKnown RBP24.32■■□□□ 1.48
PPP1CA-210ENST00000542876 GGNBP2Q9H3C7 697 aa24.32■■□□□ 1.48
PPP1CA-210ENST00000542876 FYB1O15117 783 aa24.31■■□□□ 1.48
PPP1CA-210ENST00000542876 RRS1Q15050 365 aaKnown RBP24.3■■□□□ 1.48
PPP1CA-210ENST00000542876 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
PPP1CA-210ENST00000542876 BTAF1O14981 1849 aa24.29■■□□□ 1.48
PPP1CA-210ENST00000542876 PRIM1P49642 420 aaKnown RBP24.29■■□□□ 1.48
PPP1CA-210ENST00000542876 FHDC1Q9C0D6 1143 aaPredicted RBP24.29■■□□□ 1.48
PPP1CA-210ENST00000542876 LRRC4BQ9NT99 713 aa24.29■■□□□ 1.48
PPP1CA-210ENST00000542876 KAT6BQ8WYB5 2073 aa24.28■■□□□ 1.48
PPP1CA-210ENST00000542876 ZNF827Q17R98 1081 aa24.28■■□□□ 1.48
PPP1CA-210ENST00000542876 SYT17Q9BSW7 474 aa24.28■■□□□ 1.48
PPP1CA-210ENST00000542876 RAPGEF4Q8WZA2 1011 aa24.27■■□□□ 1.48
PPP1CA-210ENST00000542876 ARXQ96QS3 562 aa24.27■■□□□ 1.48
PPP1CA-210ENST00000542876 MYOM1P52179 1685 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms