RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 ZBTB7AO95365 584 aa16.3■□□□□ 0.2
SRGAP1-205ENST00000542841 NLRP6P59044 892 aa16.29■□□□□ 0.2
SRGAP1-205ENST00000542841 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
SRGAP1-205ENST00000542841 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
SRGAP1-205ENST00000542841 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
SRGAP1-205ENST00000542841 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
SRGAP1-205ENST00000542841 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
SRGAP1-205ENST00000542841 CDCA7Q9BWT1 371 aaPredicted RBP16.28■□□□□ 0.2
SRGAP1-205ENST00000542841 SBF2Q86WG5 1849 aa16.27■□□□□ 0.2
SRGAP1-205ENST00000542841 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
SRGAP1-205ENST00000542841 PTGER2P43116 358 aa16.27■□□□□ 0.2
SRGAP1-205ENST00000542841 PROM2Q8N271 834 aa16.27■□□□□ 0.2
SRGAP1-205ENST00000542841 CABP2Q9NPB3 220 aa16.27■□□□□ 0.2
SRGAP1-205ENST00000542841 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
SRGAP1-205ENST00000542841 MARCH10Q8NA82 808 aaPredicted RBP16.26■□□□□ 0.19
SRGAP1-205ENST00000542841 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
SRGAP1-205ENST00000542841 BCL9O00512 1426 aa16.26■□□□□ 0.19
SRGAP1-205ENST00000542841 WDR17Q8IZU2 1322 aa16.25■□□□□ 0.19
SRGAP1-205ENST00000542841 SLIT3O75094 1523 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 MYOM1P52179 1685 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 SLC15A2Q16348 729 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 TXNRD1Q16881 649 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 SYT17Q9BSW7 474 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 USP6P35125 1406 aa16.24■□□□□ 0.19
SRGAP1-205ENST00000542841 KIAA1210Q9ULL0 1709 aa16.23■□□□□ 0.19
SRGAP1-205ENST00000542841 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
SRGAP1-205ENST00000542841 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
SRGAP1-205ENST00000542841 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
SRGAP1-205ENST00000542841 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
SRGAP1-205ENST00000542841 TRPM1Q7Z4N2 1603 aa16.21■□□□□ 0.19
SRGAP1-205ENST00000542841 EXOC5O00471 708 aa16.21■□□□□ 0.19
SRGAP1-205ENST00000542841 CSB-PGBD3P0DP91 1061 aa16.21■□□□□ 0.19
SRGAP1-205ENST00000542841 AKAP12Q02952 1782 aa16.21■□□□□ 0.18
SRGAP1-205ENST00000542841 CPSF1Q10570 1443 aaKnown RBP16.2■□□□□ 0.18
SRGAP1-205ENST00000542841 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
SRGAP1-205ENST00000542841 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
SRGAP1-205ENST00000542841 KCNH5Q8NCM2 988 aa16.2■□□□□ 0.18
SRGAP1-205ENST00000542841 CARD10Q9BWT7 1032 aa16.2■□□□□ 0.18
SRGAP1-205ENST00000542841 COL18A1P39060 1754 aa16.2■□□□□ 0.18
SRGAP1-205ENST00000542841 WNK3Q9BYP7 1800 aa16.19■□□□□ 0.18
SRGAP1-205ENST00000542841 C1QTNF8P60827 252 aa16.18■□□□□ 0.18
SRGAP1-205ENST00000542841 SGIP1Q9BQI5 828 aa16.18■□□□□ 0.18
SRGAP1-205ENST00000542841 PIK3C2AO00443 1686 aa16.18■□□□□ 0.18
SRGAP1-205ENST00000542841 SOX12O15370 315 aa16.17■□□□□ 0.18
SRGAP1-205ENST00000542841 ARXQ96QS3 562 aa16.17■□□□□ 0.18
SRGAP1-205ENST00000542841 CCDC7Q96M83 1385 aa16.16■□□□□ 0.18
SRGAP1-205ENST00000542841 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
SRGAP1-205ENST00000542841 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
SRGAP1-205ENST00000542841 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
SRGAP1-205ENST00000542841 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
SRGAP1-205ENST00000542841 CHD4Q14839 1912 aa16.14■□□□□ 0.17
SRGAP1-205ENST00000542841 TNS2Q63HR2 1409 aa16.14■□□□□ 0.17
SRGAP1-205ENST00000542841 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
SRGAP1-205ENST00000542841 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
SRGAP1-205ENST00000542841 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
SRGAP1-205ENST00000542841 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
SRGAP1-205ENST00000542841 GPR162Q16538 588 aa16.12■□□□□ 0.17
SRGAP1-205ENST00000542841 RGPD5Q99666 1765 aa16.12■□□□□ 0.17
SRGAP1-205ENST00000542841 NHSQ6T4R5 1651 aa16.11■□□□□ 0.17
SRGAP1-205ENST00000542841 ABCC6O95255 1503 aa16.09■□□□□ 0.17
SRGAP1-205ENST00000542841 NLRP2Q9NX02 1062 aa16.09■□□□□ 0.17
SRGAP1-205ENST00000542841 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
SRGAP1-205ENST00000542841 NFAT5O94916 1531 aa16.09■□□□□ 0.17
SRGAP1-205ENST00000542841 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
SRGAP1-205ENST00000542841 IL2RBP14784 551 aa16.08■□□□□ 0.16
SRGAP1-205ENST00000542841 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
SRGAP1-205ENST00000542841 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
SRGAP1-205ENST00000542841 POLD1P28340 1107 aa16.07■□□□□ 0.16
SRGAP1-205ENST00000542841 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
SRGAP1-205ENST00000542841 ERBB3P21860 1342 aa16.07■□□□□ 0.16
SRGAP1-205ENST00000542841 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
SRGAP1-205ENST00000542841 USP47Q96K76 1375 aa16.06■□□□□ 0.16
SRGAP1-205ENST00000542841 KLHL34Q8N239 644 aa16.06■□□□□ 0.16
SRGAP1-205ENST00000542841 CARD11Q9BXL7 1154 aa16.06■□□□□ 0.16
SRGAP1-205ENST00000542841 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
SRGAP1-205ENST00000542841 GOLGB1Q14789 3259 aaKnown RBP16.06■□□□□ 0.16
SRGAP1-205ENST00000542841 HSPA5P11021 654 aaKnown RBP16.05■□□□□ 0.16
SRGAP1-205ENST00000542841 BTAF1O14981 1849 aa16.04■□□□□ 0.16
SRGAP1-205ENST00000542841 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
SRGAP1-205ENST00000542841 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
SRGAP1-205ENST00000542841 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
SRGAP1-205ENST00000542841 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
SRGAP1-205ENST00000542841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.03■□□□□ 0.16
SRGAP1-205ENST00000542841 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
SRGAP1-205ENST00000542841 USP31Q70CQ4 1352 aa16.02■□□□□ 0.16
SRGAP1-205ENST00000542841 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
SRGAP1-205ENST00000542841 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
SRGAP1-205ENST00000542841 DIEXFQ68CQ4 756 aaKnown RBP16.01■□□□□ 0.15
SRGAP1-205ENST00000542841 NME9Q86XW9 330 aa15.99■□□□□ 0.15
SRGAP1-205ENST00000542841 DDX54Q8TDD1 881 aaKnown RBP15.99■□□□□ 0.15
SRGAP1-205ENST00000542841 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
SRGAP1-205ENST00000542841 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
SRGAP1-205ENST00000542841 QSER1Q2KHR3 1735 aa15.98■□□□□ 0.15
SRGAP1-205ENST00000542841 NLGN2Q8NFZ4 835 aa15.98■□□□□ 0.15
SRGAP1-205ENST00000542841 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
SRGAP1-205ENST00000542841 SLC24A1O60721 1099 aa15.97■□□□□ 0.15
SRGAP1-205ENST00000542841 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
SRGAP1-205ENST00000542841 LTN1O94822 1766 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms