RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ADAM32Q8TC27 787 aa10.98□□□□□ -0.65
XRCC4-206ENST00000542685 PURBQ96QR8 312 aaKnown RBP10.98□□□□□ -0.65
XRCC4-206ENST00000542685 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
XRCC4-206ENST00000542685 KCTD15Q96SI1 283 aaPredicted RBP10.97□□□□□ -0.65
XRCC4-206ENST00000542685 CDV3Q9UKY7 258 aaKnown RBP10.96□□□□□ -0.65
XRCC4-206ENST00000542685 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
XRCC4-206ENST00000542685 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
XRCC4-206ENST00000542685 C6orf118Q5T5N4 469 aa10.94□□□□□ -0.66
XRCC4-206ENST00000542685 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
XRCC4-206ENST00000542685 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
XRCC4-206ENST00000542685 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
XRCC4-206ENST00000542685 WFS1O76024 890 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 UPP2O95045 317 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 BMP2P12643 396 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 RAB15P59190 212 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 MEIOBQ8N635 442 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 BANK1Q8NDB2 785 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 PGPEP1Q9NXJ5 209 aa10.91□□□□□ -0.66
XRCC4-206ENST00000542685 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
XRCC4-206ENST00000542685 NBPF20Q3BBV1 942 aa10.9□□□□□ -0.66
XRCC4-206ENST00000542685 INTS6LQ5JSJ4 861 aaKnown RBP10.9□□□□□ -0.66
XRCC4-206ENST00000542685 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
XRCC4-206ENST00000542685 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
XRCC4-206ENST00000542685 SNRKQ9NRH2 765 aa10.89□□□□□ -0.67
XRCC4-206ENST00000542685 SOBPA7XYQ1 873 aa10.88□□□□□ -0.67
XRCC4-206ENST00000542685 ZBBXA8MT70 800 aa10.88□□□□□ -0.67
XRCC4-206ENST00000542685 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
XRCC4-206ENST00000542685 CBLBQ13191 982 aa10.88□□□□□ -0.67
XRCC4-206ENST00000542685 LCE2AQ5TA79 106 aaPredicted RBP10.88□□□□□ -0.67
XRCC4-206ENST00000542685 MTMR14Q8NCE2 650 aa10.88□□□□□ -0.67
XRCC4-206ENST00000542685 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
XRCC4-206ENST00000542685 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
XRCC4-206ENST00000542685 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
XRCC4-206ENST00000542685 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
XRCC4-206ENST00000542685 MAN1A2O60476 641 aa10.85□□□□□ -0.67
XRCC4-206ENST00000542685 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
XRCC4-206ENST00000542685 VEGFBP49765 207 aa10.84□□□□□ -0.67
XRCC4-206ENST00000542685 Q6ZVU0 165 aa10.84□□□□□ -0.67
XRCC4-206ENST00000542685 NDUFB9Q9Y6M9 179 aa10.84□□□□□ -0.67
XRCC4-206ENST00000542685 ERVH48-1M5A8F1 160 aa10.82□□□□□ -0.68
XRCC4-206ENST00000542685 APBB1O00213 710 aa10.82□□□□□ -0.68
XRCC4-206ENST00000542685 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
XRCC4-206ENST00000542685 ESPNB1AK53 854 aa10.81□□□□□ -0.68
XRCC4-206ENST00000542685 SOCS7O14512 581 aa10.81□□□□□ -0.68
XRCC4-206ENST00000542685 LCE2CQ5TA81 110 aa10.81□□□□□ -0.68
XRCC4-206ENST00000542685 ZNF784Q8NCA9 323 aaPredicted RBP10.81□□□□□ -0.68
XRCC4-206ENST00000542685 AGBL1Q96MI9 1066 aa10.81□□□□□ -0.68
XRCC4-206ENST00000542685 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
XRCC4-206ENST00000542685 GPR37L1O60883 481 aa10.8□□□□□ -0.68
XRCC4-206ENST00000542685 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
XRCC4-206ENST00000542685 RELBQ01201 579 aa10.8□□□□□ -0.68
XRCC4-206ENST00000542685 NR1H3Q13133 447 aa10.8□□□□□ -0.68
XRCC4-206ENST00000542685 DNMT3LQ9UJW3 386 aa10.79□□□□□ -0.68
XRCC4-206ENST00000542685 TTLL8A6PVC2 850 aa10.78□□□□□ -0.68
XRCC4-206ENST00000542685 NPAS3Q8IXF0 933 aa10.77□□□□□ -0.69
XRCC4-206ENST00000542685 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
XRCC4-206ENST00000542685 CYLDQ9NQC7 956 aa10.77□□□□□ -0.69
XRCC4-206ENST00000542685 FIGNL2A6NMB9 653 aa10.76□□□□□ -0.69
XRCC4-206ENST00000542685 H3BM21 787 aa10.76□□□□□ -0.69
XRCC4-206ENST00000542685 SPINT1O43278 529 aa10.76□□□□□ -0.69
XRCC4-206ENST00000542685 LILRA1O75019 489 aa10.76□□□□□ -0.69
XRCC4-206ENST00000542685 ADD1P35611 737 aaKnown RBP10.76□□□□□ -0.69
XRCC4-206ENST00000542685 ZNF395Q9H8N7 513 aaPredicted RBP10.76□□□□□ -0.69
XRCC4-206ENST00000542685 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
XRCC4-206ENST00000542685 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
XRCC4-206ENST00000542685 ADH1AP07327 375 aa10.74□□□□□ -0.69
XRCC4-206ENST00000542685 IRF7Q92985 503 aa10.74□□□□□ -0.69
XRCC4-206ENST00000542685 INSM2Q96T92 566 aaPredicted RBP10.74□□□□□ -0.69
XRCC4-206ENST00000542685 CTSOP43234 321 aaPredicted RBP10.73□□□□□ -0.69
XRCC4-206ENST00000542685 MCCD1P59942 119 aaPredicted RBP10.73□□□□□ -0.69
XRCC4-206ENST00000542685 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.73□□□□□ -0.69
XRCC4-206ENST00000542685 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
XRCC4-206ENST00000542685 WIPF1O43516 503 aa10.72□□□□□ -0.69
XRCC4-206ENST00000542685 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
XRCC4-206ENST00000542685 POLMQ9NP87 494 aaPredicted RBP10.72□□□□□ -0.69
XRCC4-206ENST00000542685 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
XRCC4-206ENST00000542685 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
XRCC4-206ENST00000542685 PPFIA3O75145 1194 aa10.7□□□□□ -0.7
XRCC4-206ENST00000542685 GMPRP36959 345 aa10.7□□□□□ -0.7
XRCC4-206ENST00000542685 PTGIRP43119 386 aa10.7□□□□□ -0.7
XRCC4-206ENST00000542685 KDF1Q8NAX2 398 aaPredicted RBP10.7□□□□□ -0.7
XRCC4-206ENST00000542685 TRIM52Q96A61 297 aa10.7□□□□□ -0.7
XRCC4-206ENST00000542685 PTSQ03393 145 aa10.69□□□□□ -0.7
XRCC4-206ENST00000542685 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
XRCC4-206ENST00000542685 PCDHB11Q9Y5F2 797 aa10.68□□□□□ -0.7
XRCC4-206ENST00000542685 ABL2P42684 1182 aa10.67□□□□□ -0.7
XRCC4-206ENST00000542685 INSM1Q01101 510 aaPredicted RBP10.67□□□□□ -0.7
XRCC4-206ENST00000542685 IRF5Q13568 498 aa10.67□□□□□ -0.7
XRCC4-206ENST00000542685 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
XRCC4-206ENST00000542685 ATP5J2-PTCD1G3V325 749 aa10.66□□□□□ -0.7
XRCC4-206ENST00000542685 ERVK-9P63128 1117 aa10.66□□□□□ -0.7
XRCC4-206ENST00000542685 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
XRCC4-206ENST00000542685 RNF217Q8TC41 542 aa10.66□□□□□ -0.7
XRCC4-206ENST00000542685 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
XRCC4-206ENST00000542685 SCTRP47872 440 aa10.65□□□□□ -0.7
XRCC4-206ENST00000542685 MCM6Q14566 821 aa10.65□□□□□ -0.7
XRCC4-206ENST00000542685 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
XRCC4-206ENST00000542685 VAC14Q08AM6 782 aa10.64□□□□□ -0.71
XRCC4-206ENST00000542685 FOXD4L5Q5VV16 416 aaPredicted RBP10.64□□□□□ -0.71
XRCC4-206ENST00000542685 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms