RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SOX12O15370 315 aa21.52■■□□□ 1.04
ECHDC2-223ENST00000542552 ZBTB7CA1YPR0 619 aa21.51■■□□□ 1.03
ECHDC2-223ENST00000542552 LTN1O94822 1766 aa21.51■■□□□ 1.03
ECHDC2-223ENST00000542552 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
ECHDC2-223ENST00000542552 CARD14Q9BXL6 1004 aa21.5■■□□□ 1.03
ECHDC2-223ENST00000542552 CRB1P82279 1406 aa21.49■■□□□ 1.03
ECHDC2-223ENST00000542552 FYB1O15117 783 aa21.49■■□□□ 1.03
ECHDC2-223ENST00000542552 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
ECHDC2-223ENST00000542552 THRAP3Q9Y2W1 955 aaKnown RBP21.48■■□□□ 1.03
ECHDC2-223ENST00000542552 WDR17Q8IZU2 1322 aa21.48■■□□□ 1.03
ECHDC2-223ENST00000542552 TCP11L2Q8N4U5 519 aa21.47■■□□□ 1.03
ECHDC2-223ENST00000542552 COG3Q96JB2 828 aa21.47■■□□□ 1.03
ECHDC2-223ENST00000542552 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
ECHDC2-223ENST00000542552 KIF20BQ96Q89 1820 aa21.46■■□□□ 1.03
ECHDC2-223ENST00000542552 A0A0G2JS52 829 aa21.45■■□□□ 1.02
ECHDC2-223ENST00000542552 C11orf95C9JLR9 678 aaPredicted RBP21.45■■□□□ 1.02
ECHDC2-223ENST00000542552 MYT1Q01538 1121 aa21.45■■□□□ 1.02
ECHDC2-223ENST00000542552 CCDC125Q86Z20 511 aa21.44■■□□□ 1.02
ECHDC2-223ENST00000542552 NSD3Q9BZ95 1437 aa21.44■■□□□ 1.02
ECHDC2-223ENST00000542552 GGNBP2Q9H3C7 697 aa21.43■■□□□ 1.02
ECHDC2-223ENST00000542552 PARP4Q9UKK3 1724 aaKnown RBP21.43■■□□□ 1.02
ECHDC2-223ENST00000542552 TOM1L2Q6ZVM7 507 aa21.42■■□□□ 1.02
ECHDC2-223ENST00000542552 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
ECHDC2-223ENST00000542552 WNK3Q9BYP7 1800 aa21.41■■□□□ 1.02
ECHDC2-223ENST00000542552 BLMP54132 1417 aaPredicted RBP21.4■■□□□ 1.02
ECHDC2-223ENST00000542552 ERBB3P21860 1342 aa21.4■■□□□ 1.02
ECHDC2-223ENST00000542552 IP6K1Q92551 441 aa21.4■■□□□ 1.02
ECHDC2-223ENST00000542552 POLR3GLQ9BT43 218 aa21.4■■□□□ 1.02
ECHDC2-223ENST00000542552 MAP3K19Q56UN5 1328 aa21.39■■□□□ 1.01
ECHDC2-223ENST00000542552 FBLN1P23142 703 aa21.39■■□□□ 1.01
ECHDC2-223ENST00000542552 CSB-PGBD3P0DP91 1061 aa21.37■■□□□ 1.01
ECHDC2-223ENST00000542552 FAM182BQ5T319 152 aa21.37■■□□□ 1.01
ECHDC2-223ENST00000542552 DISP2A7MBM2 1401 aa21.37■■□□□ 1.01
ECHDC2-223ENST00000542552 ANKRD24Q8TF21 1146 aa21.36■■□□□ 1.01
ECHDC2-223ENST00000542552 LRRC37A3O60309 1634 aa21.36■■□□□ 1.01
ECHDC2-223ENST00000542552 CCDC7Q96M83 1385 aa21.36■■□□□ 1.01
ECHDC2-223ENST00000542552 CGNL1Q0VF96 1302 aa21.35■■□□□ 1.01
ECHDC2-223ENST00000542552 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
ECHDC2-223ENST00000542552 PANK3Q9H999 370 aa21.35■■□□□ 1.01
ECHDC2-223ENST00000542552 RTL1A6NKG5 1358 aa21.35■■□□□ 1.01
ECHDC2-223ENST00000542552 KIF7Q2M1P5 1343 aa21.34■■□□□ 1.01
ECHDC2-223ENST00000542552 HOXC9P31274 260 aa21.34■■□□□ 1.01
ECHDC2-223ENST00000542552 PDE3BQ13370 1112 aa21.34■■□□□ 1.01
ECHDC2-223ENST00000542552 FAM208AQ9UK61 1670 aaKnown RBP21.34■■□□□ 1.01
ECHDC2-223ENST00000542552 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
ECHDC2-223ENST00000542552 FAM196AQ6ZSG2 479 aa21.33■■□□□ 1.01
ECHDC2-223ENST00000542552 RGPD1P0DJD0 1748 aa21.32■■□□□ 1
ECHDC2-223ENST00000542552 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
ECHDC2-223ENST00000542552 AMPHP49418 695 aa21.32■■□□□ 1
ECHDC2-223ENST00000542552 PEAK1Q9H792 1746 aa21.32■■□□□ 1
ECHDC2-223ENST00000542552 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
ECHDC2-223ENST00000542552 KIF24Q5T7B8 1368 aa21.31■■□□□ 1
ECHDC2-223ENST00000542552 TNS1Q9HBL0 1735 aaKnown RBP21.3■■□□□ 1
ECHDC2-223ENST00000542552 DDB1Q16531 1140 aa21.3■■□□□ 1
ECHDC2-223ENST00000542552 SF3B2Q13435 895 aaKnown RBP21.28■■□□□ 1
ECHDC2-223ENST00000542552 INSRP06213 1382 aa21.27■■□□□ 1
ECHDC2-223ENST00000542552 DEFB132Q7Z7B7 95 aa21.27■■□□□ 1
ECHDC2-223ENST00000542552 LTV1Q96GA3 475 aaPredicted RBP21.27■■□□□ 1
ECHDC2-223ENST00000542552 RGPD2P0DJD1 1756 aa21.27■■□□□ 1
ECHDC2-223ENST00000542552 MAP2P11137 1827 aaKnown RBP21.27■□□□□ 0.99
ECHDC2-223ENST00000542552 FLT4P35916 1363 aa21.26■□□□□ 0.99
ECHDC2-223ENST00000542552 MARCH10Q8NA82 808 aaPredicted RBP21.26■□□□□ 0.99
ECHDC2-223ENST00000542552 OVOS2A0A0G2JMS6 1433 aa21.26■□□□□ 0.99
ECHDC2-223ENST00000542552 NSD2O96028 1365 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 EXOC5O00471 708 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 BCL9O00512 1426 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 HSP90AB2PQ58FF8 381 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 TNS2Q63HR2 1409 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 EMILIN1Q9Y6C2 1016 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
ECHDC2-223ENST00000542552 TRIM37O94972 964 aa21.24■□□□□ 0.99
ECHDC2-223ENST00000542552 IL2RBP14784 551 aa21.24■□□□□ 0.99
ECHDC2-223ENST00000542552 WASHC2AQ641Q2 1341 aa21.24■□□□□ 0.99
ECHDC2-223ENST00000542552 BAG6P46379 1132 aa21.23■□□□□ 0.99
ECHDC2-223ENST00000542552 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
ECHDC2-223ENST00000542552 NBPF6Q5VWK0 638 aa21.21■□□□□ 0.99
ECHDC2-223ENST00000542552 NBPF4Q96M43 638 aa21.21■□□□□ 0.99
ECHDC2-223ENST00000542552 KNSTRNQ9Y448 316 aa21.21■□□□□ 0.99
ECHDC2-223ENST00000542552 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
ECHDC2-223ENST00000542552 PER1O15534 1290 aaPredicted RBP21.2■□□□□ 0.98
ECHDC2-223ENST00000542552 AMER1Q5JTC6 1135 aaPredicted RBP21.2■□□□□ 0.98
ECHDC2-223ENST00000542552 EN1Q05925 392 aaPredicted RBP21.18■□□□□ 0.98
ECHDC2-223ENST00000542552 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
ECHDC2-223ENST00000542552 CAMKK2Q96RR4 588 aa21.17■□□□□ 0.98
ECHDC2-223ENST00000542552 MEGF6O75095 1541 aa21.16■□□□□ 0.98
ECHDC2-223ENST00000542552 NCAPD2Q15021 1401 aa21.16■□□□□ 0.98
ECHDC2-223ENST00000542552 PPM1GO15355 546 aaPredicted RBP21.16■□□□□ 0.98
ECHDC2-223ENST00000542552 APBA3O96018 575 aa21.16■□□□□ 0.98
ECHDC2-223ENST00000542552 SRCAPQ6ZRS2 3230 aa21.15■□□□□ 0.98
ECHDC2-223ENST00000542552 MORC1Q86VD1 984 aa21.15■□□□□ 0.98
ECHDC2-223ENST00000542552 BCL11BQ9C0K0 894 aaPredicted RBP21.15■□□□□ 0.98
ECHDC2-223ENST00000542552 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
ECHDC2-223ENST00000542552 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
ECHDC2-223ENST00000542552 USHBP1Q8N6Y0 703 aa21.14■□□□□ 0.97
ECHDC2-223ENST00000542552 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
ECHDC2-223ENST00000542552 PTF1AQ7RTS3 328 aa21.13■□□□□ 0.97
ECHDC2-223ENST00000542552 RGPD3A6NKT7 1758 aaPredicted RBP21.13■□□□□ 0.97
ECHDC2-223ENST00000542552 RGPD4Q7Z3J3 1758 aa21.13■□□□□ 0.97
ECHDC2-223ENST00000542552 RREB1Q92766 1687 aa21.12■□□□□ 0.97
ECHDC2-223ENST00000542552 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms