RNA–Protein interactions for RNA: ENST00000542254.5

CD6-212, Transcript of CD6 molecule, humanhuman

TSL 4

Gene CD6, Length 547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD6-212ENST00000542254 COL18A1P39060 1754 aa29.11■■■□□ 2.25
CD6-212ENST00000542254 SF3B2Q13435 895 aaKnown RBP29.1■■■□□ 2.25
CD6-212ENST00000542254 NME9Q86XW9 330 aa29.09■■■□□ 2.25
CD6-212ENST00000542254 USP35Q9P2H5 1018 aa29.08■■■□□ 2.25
CD6-212ENST00000542254 SOX12O15370 315 aa29.07■■■□□ 2.24
CD6-212ENST00000542254 OVOS2A0A0J9YW53 1432 aa29.06■■■□□ 2.24
CD6-212ENST00000542254 OVOS2Q6IE36 1432 aa29.06■■■□□ 2.24
CD6-212ENST00000542254 WDR17Q8IZU2 1322 aa29.05■■■□□ 2.24
CD6-212ENST00000542254 TOM1L2Q6ZVM7 507 aa29.03■■■□□ 2.24
CD6-212ENST00000542254 PARP4Q9UKK3 1724 aaKnown RBP29.02■■■□□ 2.24
CD6-212ENST00000542254 LTN1O94822 1766 aa29.01■■■□□ 2.23
CD6-212ENST00000542254 EIF4G2P78344 907 aaKnown RBP eCLIP29.01■■■□□ 2.23
CD6-212ENST00000542254 ZRANB1Q9UGI0 708 aa29.01■■■□□ 2.23
CD6-212ENST00000542254 RGPD1P0DJD0 1748 aa29■■■□□ 2.23
CD6-212ENST00000542254 PDE3BQ13370 1112 aa29■■■□□ 2.23
CD6-212ENST00000542254 COG3Q96JB2 828 aa29■■■□□ 2.23
CD6-212ENST00000542254 CSB-PGBD3P0DP91 1061 aa28.99■■■□□ 2.23
CD6-212ENST00000542254 CDCA7Q9BWT1 371 aaPredicted RBP28.99■■■□□ 2.23
CD6-212ENST00000542254 AXIN2Q9Y2T1 843 aa28.99■■■□□ 2.23
CD6-212ENST00000542254 RGPD5Q99666 1765 aa28.98■■■□□ 2.23
CD6-212ENST00000542254 C11orf95C9JLR9 678 aaPredicted RBP28.98■■■□□ 2.23
CD6-212ENST00000542254 MYOM1P52179 1685 aa28.97■■■□□ 2.23
CD6-212ENST00000542254 FAM196AQ6ZSG2 479 aa28.97■■■□□ 2.23
CD6-212ENST00000542254 CCDC7Q96M83 1385 aa28.96■■■□□ 2.23
CD6-212ENST00000542254 WNK3Q9BYP7 1800 aa28.96■■■□□ 2.23
CD6-212ENST00000542254 BAG6P46379 1132 aa28.95■■■□□ 2.22
CD6-212ENST00000542254 CARD10Q9BWT7 1032 aa28.95■■■□□ 2.22
CD6-212ENST00000542254 KIF20BQ96Q89 1820 aa28.92■■■□□ 2.22
CD6-212ENST00000542254 ERBB3P21860 1342 aa28.92■■■□□ 2.22
CD6-212ENST00000542254 LRRC37A3O60309 1634 aa28.91■■■□□ 2.22
CD6-212ENST00000542254 FAM208AQ9UK61 1670 aaKnown RBP28.89■■■□□ 2.22
CD6-212ENST00000542254 DDB1Q16531 1140 aa28.89■■■□□ 2.22
CD6-212ENST00000542254 DISP2A7MBM2 1401 aa28.88■■■□□ 2.21
CD6-212ENST00000542254 HSPA5P11021 654 aaKnown RBP28.88■■■□□ 2.21
CD6-212ENST00000542254 FAM182BQ5T319 152 aa28.88■■■□□ 2.21
CD6-212ENST00000542254 OVOS2A0A0G2JMS6 1433 aa28.87■■■□□ 2.21
CD6-212ENST00000542254 TNS1Q9HBL0 1735 aaKnown RBP28.87■■■□□ 2.21
CD6-212ENST00000542254 RTL1A6NKG5 1358 aa28.87■■■□□ 2.21
CD6-212ENST00000542254 FYB1O15117 783 aa28.86■■■□□ 2.21
CD6-212ENST00000542254 DEFB132Q7Z7B7 95 aa28.86■■■□□ 2.21
CD6-212ENST00000542254 IP6K1Q92551 441 aa28.86■■■□□ 2.21
CD6-212ENST00000542254 NSD3Q9BZ95 1437 aa28.86■■■□□ 2.21
CD6-212ENST00000542254 ANKRD24Q8TF21 1146 aa28.85■■■□□ 2.21
CD6-212ENST00000542254 GGNBP2Q9H3C7 697 aa28.83■■■□□ 2.21
CD6-212ENST00000542254 NLRP2Q9NX02 1062 aa28.83■■■□□ 2.21
CD6-212ENST00000542254 AMPHP49418 695 aa28.82■■■□□ 2.2
CD6-212ENST00000542254 MAP3K19Q56UN5 1328 aa28.82■■■□□ 2.2
CD6-212ENST00000542254 PARD3Q8TEW0 1356 aa28.81■■■□□ 2.2
CD6-212ENST00000542254 TRIM37O94972 964 aa28.81■■■□□ 2.2
CD6-212ENST00000542254 POLR3GLQ9BT43 218 aa28.81■■■□□ 2.2
CD6-212ENST00000542254 CGNL1Q0VF96 1302 aa28.8■■■□□ 2.2
CD6-212ENST00000542254 TNS2Q63HR2 1409 aa28.79■■■□□ 2.2
CD6-212ENST00000542254 KIF24Q5T7B8 1368 aa28.79■■■□□ 2.2
CD6-212ENST00000542254 PEAK1Q9H792 1746 aa28.79■■■□□ 2.2
CD6-212ENST00000542254 EXOC5O00471 708 aa28.78■■■□□ 2.2
CD6-212ENST00000542254 HOXC9P31274 260 aa28.78■■■□□ 2.2
CD6-212ENST00000542254 CARD14Q9BXL6 1004 aa28.78■■■□□ 2.2
CD6-212ENST00000542254 BCL9O00512 1426 aa28.77■■■□□ 2.2
CD6-212ENST00000542254 SMG6Q86US8 1419 aaKnown RBP28.77■■■□□ 2.2
CD6-212ENST00000542254 IL2RBP14784 551 aa28.76■■■□□ 2.19
CD6-212ENST00000542254 APBA3O96018 575 aa28.74■■■□□ 2.19
CD6-212ENST00000542254 EN1Q05925 392 aaPredicted RBP28.74■■■□□ 2.19
CD6-212ENST00000542254 FLT4P35916 1363 aa28.73■■■□□ 2.19
CD6-212ENST00000542254 LTV1Q96GA3 475 aaPredicted RBP28.72■■■□□ 2.19
CD6-212ENST00000542254 RRS1Q15050 365 aaKnown RBP28.71■■■□□ 2.19
CD6-212ENST00000542254 SBF2Q86WG5 1849 aa28.71■■■□□ 2.19
CD6-212ENST00000542254 ANKRD26Q9UPS8 1709 aa28.7■■■□□ 2.19
CD6-212ENST00000542254 MARCH10Q8NA82 808 aaPredicted RBP28.7■■■□□ 2.18
CD6-212ENST00000542254 RGPD3A6NKT7 1758 aaPredicted RBP28.69■■■□□ 2.18
CD6-212ENST00000542254 RGPD4Q7Z3J3 1758 aa28.69■■■□□ 2.18
CD6-212ENST00000542254 NSD2O96028 1365 aa28.68■■■□□ 2.18
CD6-212ENST00000542254 INSRP06213 1382 aa28.68■■■□□ 2.18
CD6-212ENST00000542254 FBLN1P23142 703 aa28.67■■■□□ 2.18
CD6-212ENST00000542254 CAMKK2Q96RR4 588 aa28.67■■■□□ 2.18
CD6-212ENST00000542254 BCL11BQ9C0K0 894 aaPredicted RBP28.66■■■□□ 2.18
CD6-212ENST00000542254 RREB1Q92766 1687 aa28.65■■■□□ 2.18
CD6-212ENST00000542254 EZH2Q15910 746 aaKnown RBP28.65■■■□□ 2.18
CD6-212ENST00000542254 PANK3Q9H999 370 aa28.65■■■□□ 2.18
CD6-212ENST00000542254 PLSCR1O15162 318 aa28.6■■■□□ 2.17
CD6-212ENST00000542254 NHSQ6T4R5 1651 aa28.6■■■□□ 2.17
CD6-212ENST00000542254 RGPD2P0DJD1 1756 aa28.6■■■□□ 2.17
CD6-212ENST00000542254 HSP90AB2PQ58FF8 381 aa28.59■■■□□ 2.17
CD6-212ENST00000542254 NUP188Q5SRE5 1749 aa28.58■■■□□ 2.17
CD6-212ENST00000542254 MAP2P11137 1827 aaKnown RBP28.58■■■□□ 2.17
CD6-212ENST00000542254 EMILIN1Q9Y6C2 1016 aa28.58■■■□□ 2.17
CD6-212ENST00000542254 NBPF14Q5TI25 921 aa28.57■■■□□ 2.16
CD6-212ENST00000542254 RAPGEF4Q8WZA2 1011 aa28.57■■■□□ 2.16
CD6-212ENST00000542254 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
CD6-212ENST00000542254 KIF7Q2M1P5 1343 aa28.57■■■□□ 2.16
CD6-212ENST00000542254 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
CD6-212ENST00000542254 PPM1GO15355 546 aaPredicted RBP28.55■■■□□ 2.16
CD6-212ENST00000542254 NBPF6Q5VWK0 638 aa28.55■■■□□ 2.16
CD6-212ENST00000542254 NBPF4Q96M43 638 aa28.55■■■□□ 2.16
CD6-212ENST00000542254 MEGF6O75095 1541 aa28.54■■■□□ 2.16
CD6-212ENST00000542254 ZCRB1Q8TBF4 217 aaKnown RBP28.53■■■□□ 2.16
CD6-212ENST00000542254 TATP17735 454 aaPredicted RBP28.52■■■□□ 2.16
CD6-212ENST00000542254 PSDA5PKW4 1024 aaPredicted RBP28.51■■■□□ 2.15
CD6-212ENST00000542254 DDX54Q8TDD1 881 aaKnown RBP28.51■■■□□ 2.15
CD6-212ENST00000542254 POLKQ9UBT6 870 aa28.51■■■□□ 2.15
CD6-212ENST00000542254 LRP5O75197 1615 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms