RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 CCDC116Q8IYX3 515 aa10.19□□□□□ -0.78
RAP1B-226ENST00000541968 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
RAP1B-226ENST00000541968 KCTD15Q96SI1 283 aaPredicted RBP10.19□□□□□ -0.78
RAP1B-226ENST00000541968 CDV3Q9UKY7 258 aaKnown RBP10.19□□□□□ -0.78
RAP1B-226ENST00000541968 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
RAP1B-226ENST00000541968 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
RAP1B-226ENST00000541968 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
RAP1B-226ENST00000541968 ZFP42Q96MM3 310 aa10.17□□□□□ -0.78
RAP1B-226ENST00000541968 SCARF1Q14162 830 aa10.16□□□□□ -0.78
RAP1B-226ENST00000541968 PPP1R26Q5T8A7 1209 aaPredicted RBP10.16□□□□□ -0.78
RAP1B-226ENST00000541968 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
RAP1B-226ENST00000541968 ZBBXA8MT70 800 aa10.15□□□□□ -0.78
RAP1B-226ENST00000541968 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.78
RAP1B-226ENST00000541968 RAB15P59190 212 aa10.14□□□□□ -0.79
RAP1B-226ENST00000541968 INTS6LQ5JSJ4 861 aaKnown RBP10.14□□□□□ -0.79
RAP1B-226ENST00000541968 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
RAP1B-226ENST00000541968 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
RAP1B-226ENST00000541968 NBPF20Q3BBV1 942 aa10.13□□□□□ -0.79
RAP1B-226ENST00000541968 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
RAP1B-226ENST00000541968 APBB1O00213 710 aa10.12□□□□□ -0.79
RAP1B-226ENST00000541968 SOCS7O14512 581 aa10.12□□□□□ -0.79
RAP1B-226ENST00000541968 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
RAP1B-226ENST00000541968 PCDHB9Q9Y5E1 797 aa10.12□□□□□ -0.79
RAP1B-226ENST00000541968 UPP2O95045 317 aa10.11□□□□□ -0.79
RAP1B-226ENST00000541968 BMP2P12643 396 aa10.11□□□□□ -0.79
RAP1B-226ENST00000541968 DHX9Q08211 1270 aaKnown RBP10.11□□□□□ -0.79
RAP1B-226ENST00000541968 MEIOBQ8N635 442 aa10.11□□□□□ -0.79
RAP1B-226ENST00000541968 CBLBQ13191 982 aa10.1□□□□□ -0.79
RAP1B-226ENST00000541968 GPR37L1O60883 481 aa10.09□□□□□ -0.79
RAP1B-226ENST00000541968 NR1H3Q13133 447 aa10.09□□□□□ -0.79
RAP1B-226ENST00000541968 LINC00528Q8N1L1 170 aa10.09□□□□□ -0.79
RAP1B-226ENST00000541968 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
RAP1B-226ENST00000541968 SOBPA7XYQ1 873 aa10.07□□□□□ -0.8
RAP1B-226ENST00000541968 ERVH48-1M5A8F1 160 aa10.07□□□□□ -0.8
RAP1B-226ENST00000541968 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
RAP1B-226ENST00000541968 ESPNB1AK53 854 aa10.06□□□□□ -0.8
RAP1B-226ENST00000541968 GIGYF1O75420 1035 aaPredicted RBP10.06□□□□□ -0.8
RAP1B-226ENST00000541968 TREML4Q6UXN2 200 aa10.06□□□□□ -0.8
RAP1B-226ENST00000541968 TSEN34Q9BSV6 310 aaKnown RBP10.06□□□□□ -0.8
RAP1B-226ENST00000541968 Q6ZVU0 165 aa10.05□□□□□ -0.8
RAP1B-226ENST00000541968 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
RAP1B-226ENST00000541968 PRM3Q9NNZ6 103 aa10.05□□□□□ -0.8
RAP1B-226ENST00000541968 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
RAP1B-226ENST00000541968 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
RAP1B-226ENST00000541968 WFS1O76024 890 aa10.04□□□□□ -0.8
RAP1B-226ENST00000541968 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
RAP1B-226ENST00000541968 MAN1A2O60476 641 aa10.03□□□□□ -0.8
RAP1B-226ENST00000541968 NFX1Q12986 1120 aaKnown RBP10.03□□□□□ -0.8
RAP1B-226ENST00000541968 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
RAP1B-226ENST00000541968 RELBQ01201 579 aa10.02□□□□□ -0.81
RAP1B-226ENST00000541968 LILRA1O75019 489 aa10.01□□□□□ -0.81
RAP1B-226ENST00000541968 MCCD1P59942 119 aaPredicted RBP10.01□□□□□ -0.81
RAP1B-226ENST00000541968 GDPD2Q9HCC8 539 aa10.01□□□□□ -0.81
RAP1B-226ENST00000541968 CYLDQ9NQC7 956 aa10.01□□□□□ -0.81
RAP1B-226ENST00000541968 NXF1Q9UBU9 619 aaKnown RBP10.01□□□□□ -0.81
RAP1B-226ENST00000541968 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
RAP1B-226ENST00000541968 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
RAP1B-226ENST00000541968 VEGFBP49765 207 aa10□□□□□ -0.81
RAP1B-226ENST00000541968 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
RAP1B-226ENST00000541968 ABL2P42684 1182 aa9.99□□□□□ -0.81
RAP1B-226ENST00000541968 IRF5Q13568 498 aa9.99□□□□□ -0.81
RAP1B-226ENST00000541968 MCM6Q14566 821 aa9.99□□□□□ -0.81
RAP1B-226ENST00000541968 ZNF592Q92610 1267 aa9.99□□□□□ -0.81
RAP1B-226ENST00000541968 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
RAP1B-226ENST00000541968 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
RAP1B-226ENST00000541968 TTLL8A6PVC2 850 aa9.98□□□□□ -0.81
RAP1B-226ENST00000541968 SPINT1O43278 529 aa9.98□□□□□ -0.81
RAP1B-226ENST00000541968 RNF20Q5VTR2 975 aa9.98□□□□□ -0.81
RAP1B-226ENST00000541968 DNMT3LQ9UJW3 386 aa9.98□□□□□ -0.81
RAP1B-226ENST00000541968 ADH1AP07327 375 aa9.97□□□□□ -0.81
RAP1B-226ENST00000541968 SLC16A10Q8TF71 515 aa9.97□□□□□ -0.81
RAP1B-226ENST00000541968 VAC14Q08AM6 782 aa9.96□□□□□ -0.82
RAP1B-226ENST00000541968 TRIM52Q96A61 297 aa9.96□□□□□ -0.82
RAP1B-226ENST00000541968 INSM2Q96T92 566 aaPredicted RBP9.96□□□□□ -0.82
RAP1B-226ENST00000541968 EIF4G2P78344 907 aaKnown RBP eCLIP9.95□□□□□ -0.82
RAP1B-226ENST00000541968 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
RAP1B-226ENST00000541968 PCDHB11Q9Y5F2 797 aa9.95□□□□□ -0.82
RAP1B-226ENST00000541968 PTGIRP43119 386 aa9.94□□□□□ -0.82
RAP1B-226ENST00000541968 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
RAP1B-226ENST00000541968 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.82
RAP1B-226ENST00000541968 LCE2CQ5TA81 110 aa9.94□□□□□ -0.82
RAP1B-226ENST00000541968 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
RAP1B-226ENST00000541968 KDF1Q8NAX2 398 aaPredicted RBP9.94□□□□□ -0.82
RAP1B-226ENST00000541968 CEP126Q9P2H0 1117 aa9.94□□□□□ -0.82
RAP1B-226ENST00000541968 NPAS3Q8IXF0 933 aa9.93□□□□□ -0.82
RAP1B-226ENST00000541968 H3BM21 787 aa9.92□□□□□ -0.82
RAP1B-226ENST00000541968 ERVK-9P63128 1117 aa9.92□□□□□ -0.82
RAP1B-226ENST00000541968 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
RAP1B-226ENST00000541968 CC2D2BQ6DHV5 1058 aa9.92□□□□□ -0.82
RAP1B-226ENST00000541968 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
RAP1B-226ENST00000541968 ATP5J2-PTCD1G3V325 749 aa9.91□□□□□ -0.82
RAP1B-226ENST00000541968 SCTRP47872 440 aa9.91□□□□□ -0.82
RAP1B-226ENST00000541968 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
RAP1B-226ENST00000541968 WASHC4Q2M389 1173 aa9.9□□□□□ -0.82
RAP1B-226ENST00000541968 IRF7Q92985 503 aa9.9□□□□□ -0.82
RAP1B-226ENST00000541968 PPFIA3O75145 1194 aa9.89□□□□□ -0.83
RAP1B-226ENST00000541968 PTSQ03393 145 aa9.89□□□□□ -0.83
RAP1B-226ENST00000541968 CCDC85AQ96PX6 553 aaPredicted RBP9.89□□□□□ -0.83
RAP1B-226ENST00000541968 ERBB4Q15303 1308 aa9.88□□□□□ -0.83
RAP1B-226ENST00000541968 RNF217Q8TC41 542 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms