RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 KIAA0232Q92628 1395 aa28.5■■■□□ 2.15
MSRB3-211ENST00000541897 ZC3H6P61129 1189 aaKnown RBP28.48■■■□□ 2.15
MSRB3-211ENST00000541897 NWD2Q9ULI1 1742 aa28.48■■■□□ 2.15
MSRB3-211ENST00000541897 SMG6Q86US8 1419 aaKnown RBP28.47■■■□□ 2.15
MSRB3-211ENST00000541897 SOX12O15370 315 aa28.47■■■□□ 2.15
MSRB3-211ENST00000541897 PRDM11Q9NQV5 511 aa28.47■■■□□ 2.15
MSRB3-211ENST00000541897 RTL1A6NKG5 1358 aa28.47■■■□□ 2.15
MSRB3-211ENST00000541897 MAP3K19Q56UN5 1328 aa28.46■■■□□ 2.15
MSRB3-211ENST00000541897 COL14A1Q05707 1796 aaKnown RBP28.46■■■□□ 2.15
MSRB3-211ENST00000541897 FAM83GA6ND36 823 aa28.45■■■□□ 2.14
MSRB3-211ENST00000541897 PRKRIP1Q9H875 184 aaPredicted RBP28.45■■■□□ 2.14
MSRB3-211ENST00000541897 POLKQ9UBT6 870 aa28.45■■■□□ 2.14
MSRB3-211ENST00000541897 TNNT2P45379 298 aaPredicted RBP28.44■■■□□ 2.14
MSRB3-211ENST00000541897 VPS72Q15906 364 aa28.44■■■□□ 2.14
MSRB3-211ENST00000541897 LTN1O94822 1766 aa28.44■■■□□ 2.14
MSRB3-211ENST00000541897 LMO7Q8WWI1 1683 aa28.43■■■□□ 2.14
MSRB3-211ENST00000541897 FBLN1P23142 703 aa28.43■■■□□ 2.14
MSRB3-211ENST00000541897 RRS1Q15050 365 aaKnown RBP28.43■■■□□ 2.14
MSRB3-211ENST00000541897 CCDC9Q9Y3X0 531 aaKnown RBP28.43■■■□□ 2.14
MSRB3-211ENST00000541897 COL18A1P39060 1754 aa28.42■■■□□ 2.14
MSRB3-211ENST00000541897 IP6K1Q92551 441 aa28.42■■■□□ 2.14
MSRB3-211ENST00000541897 FLT4P35916 1363 aa28.41■■■□□ 2.14
MSRB3-211ENST00000541897 CNGB1Q14028 1251 aaPredicted RBP28.41■■■□□ 2.14
MSRB3-211ENST00000541897 CCDC125Q86Z20 511 aa28.41■■■□□ 2.14
MSRB3-211ENST00000541897 SEPT12Q8IYM1 358 aa28.41■■■□□ 2.14
MSRB3-211ENST00000541897 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
MSRB3-211ENST00000541897 ANP32CO43423 234 aa28.4■■■□□ 2.14
MSRB3-211ENST00000541897 EMILIN1Q9Y6C2 1016 aa28.4■■■□□ 2.14
MSRB3-211ENST00000541897 MAP2P11137 1827 aaKnown RBP28.4■■■□□ 2.14
MSRB3-211ENST00000541897 PPP2R1AP30153 589 aa28.39■■■□□ 2.14
MSRB3-211ENST00000541897 NRAPQ86VF7 1730 aa28.38■■■□□ 2.13
MSRB3-211ENST00000541897 HOXC9P31274 260 aa28.38■■■□□ 2.13
MSRB3-211ENST00000541897 AMPHP49418 695 aa28.38■■■□□ 2.13
MSRB3-211ENST00000541897 CHRNA2Q15822 529 aa28.38■■■□□ 2.13
MSRB3-211ENST00000541897 MYBBP1AQ9BQG0 1328 aaKnown RBP28.38■■■□□ 2.13
MSRB3-211ENST00000541897 PEAK1Q9H792 1746 aa28.38■■■□□ 2.13
MSRB3-211ENST00000541897 INSRP06213 1382 aa28.37■■■□□ 2.13
MSRB3-211ENST00000541897 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
MSRB3-211ENST00000541897 BTG4Q9NY30 223 aa28.36■■■□□ 2.13
MSRB3-211ENST00000541897 CAMTA1Q9Y6Y1 1673 aa28.35■■■□□ 2.13
MSRB3-211ENST00000541897 SRCAPQ6ZRS2 3230 aa28.35■■■□□ 2.13
MSRB3-211ENST00000541897 ONECUT3O60422 494 aaPredicted RBP28.35■■■□□ 2.13
MSRB3-211ENST00000541897 MTHFSP49914 203 aa28.35■■■□□ 2.13
MSRB3-211ENST00000541897 AXIN2Q9Y2T1 843 aa28.35■■■□□ 2.13
MSRB3-211ENST00000541897 ZBTB7CA1YPR0 619 aa28.34■■■□□ 2.13
MSRB3-211ENST00000541897 COL5A2P05997 1499 aaPredicted RBP28.33■■■□□ 2.13
MSRB3-211ENST00000541897 PPM1GO15355 546 aaPredicted RBP28.31■■■□□ 2.12
MSRB3-211ENST00000541897 KRT27Q7Z3Y8 459 aa28.3■■■□□ 2.12
MSRB3-211ENST00000541897 ERBB3P21860 1342 aa28.29■■■□□ 2.12
MSRB3-211ENST00000541897 A0A0G2JS52 829 aa28.29■■■□□ 2.12
MSRB3-211ENST00000541897 MYT1Q01538 1121 aa28.29■■■□□ 2.12
MSRB3-211ENST00000541897 FAM98CQ17RN3 349 aaKnown RBP28.29■■■□□ 2.12
MSRB3-211ENST00000541897 HSP90AB2PQ58FF8 381 aa28.29■■■□□ 2.12
MSRB3-211ENST00000541897 DEFB132Q7Z7B7 95 aa28.29■■■□□ 2.12
MSRB3-211ENST00000541897 CFAP53Q96M91 514 aa28.27■■■□□ 2.12
MSRB3-211ENST00000541897 WDR17Q8IZU2 1322 aa28.26■■■□□ 2.11
MSRB3-211ENST00000541897 ANKRD24Q8TF21 1146 aa28.26■■■□□ 2.11
MSRB3-211ENST00000541897 RGPD5Q99666 1765 aa28.26■■■□□ 2.11
MSRB3-211ENST00000541897 EVA1CP58658 441 aa28.25■■■□□ 2.11
MSRB3-211ENST00000541897 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
MSRB3-211ENST00000541897 FAM208AQ9UK61 1670 aaKnown RBP28.25■■■□□ 2.11
MSRB3-211ENST00000541897 SF3B2Q13435 895 aaKnown RBP28.23■■■□□ 2.11
MSRB3-211ENST00000541897 SPATA31A5Q5VU36 1347 aa28.21■■■□□ 2.11
MSRB3-211ENST00000541897 SPATA31A7Q8IWB4 1347 aa28.21■■■□□ 2.11
MSRB3-211ENST00000541897 CRB1P82279 1406 aa28.21■■■□□ 2.11
MSRB3-211ENST00000541897 EIF4A2Q14240 407 aaKnown RBP28.21■■■□□ 2.11
MSRB3-211ENST00000541897 STRN4Q9NRL3 753 aa28.21■■■□□ 2.11
MSRB3-211ENST00000541897 DIAPH1O60610 1272 aaKnown RBP28.2■■■□□ 2.1
MSRB3-211ENST00000541897 IL13P35225 146 aa28.19■■■□□ 2.1
MSRB3-211ENST00000541897 CSB-PGBD3P0DP91 1061 aa28.18■■■□□ 2.1
MSRB3-211ENST00000541897 FAM182BQ5T319 152 aa28.18■■■□□ 2.1
MSRB3-211ENST00000541897 LARP1Q6PKG0 1096 aaKnown RBP28.18■■■□□ 2.1
MSRB3-211ENST00000541897 CARD10Q9BWT7 1032 aa28.18■■■□□ 2.1
MSRB3-211ENST00000541897 LTV1Q96GA3 475 aaPredicted RBP28.17■■■□□ 2.1
MSRB3-211ENST00000541897 NCAPD2Q15021 1401 aa28.17■■■□□ 2.1
MSRB3-211ENST00000541897 TOM1L2Q6ZVM7 507 aa28.16■■■□□ 2.1
MSRB3-211ENST00000541897 THRAP3Q9Y2W1 955 aaKnown RBP28.15■■■□□ 2.1
MSRB3-211ENST00000541897 THSD7AQ9UPZ6 1657 aa28.15■■■□□ 2.1
MSRB3-211ENST00000541897 SPATA31A1Q5TZJ5 1347 aa28.15■■■□□ 2.1
MSRB3-211ENST00000541897 NUDCQ9Y266 331 aa28.14■■■□□ 2.1
MSRB3-211ENST00000541897 RGPD1P0DJD0 1748 aa28.14■■■□□ 2.1
MSRB3-211ENST00000541897 IGSF1Q8N6C5 1336 aa28.14■■■□□ 2.09
MSRB3-211ENST00000541897 NBPF6Q5VWK0 638 aa28.13■■■□□ 2.09
MSRB3-211ENST00000541897 NBPF4Q96M43 638 aa28.13■■■□□ 2.09
MSRB3-211ENST00000541897 EYA1Q99502 592 aa28.13■■■□□ 2.09
MSRB3-211ENST00000541897 NLRP2Q9NX02 1062 aa28.13■■■□□ 2.09
MSRB3-211ENST00000541897 CCER2I3L3R5 266 aa28.11■■■□□ 2.09
MSRB3-211ENST00000541897 BAG6P46379 1132 aa28.09■■■□□ 2.09
MSRB3-211ENST00000541897 BARGINQ6ZT62 677 aa28.09■■■□□ 2.09
MSRB3-211ENST00000541897 TCP11L2Q8N4U5 519 aa28.09■■■□□ 2.09
MSRB3-211ENST00000541897 PLEKHG2Q9H7P9 1386 aa28.09■■■□□ 2.09
MSRB3-211ENST00000541897 LRP5O75197 1615 aa28.08■■■□□ 2.09
MSRB3-211ENST00000541897 USP35Q9P2H5 1018 aa28.08■■■□□ 2.09
MSRB3-211ENST00000541897 KDRP35968 1356 aa28.08■■■□□ 2.09
MSRB3-211ENST00000541897 RGPD2P0DJD1 1756 aa28.07■■■□□ 2.08
MSRB3-211ENST00000541897 MIER1Q8N108 512 aa28.06■■■□□ 2.08
MSRB3-211ENST00000541897 CDCA7Q9BWT1 371 aaPredicted RBP28.06■■■□□ 2.08
MSRB3-211ENST00000541897 EN1Q05925 392 aaPredicted RBP28.05■■■□□ 2.08
MSRB3-211ENST00000541897 MRS2Q9HD23 443 aa28.05■■■□□ 2.08
MSRB3-211ENST00000541897 U2SURPO15042 1029 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms