RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 KIF20BQ96Q89 1820 aa19.88■□□□□ 0.77
SUDS3-203ENST00000541591 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
SUDS3-203ENST00000541591 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
SUDS3-203ENST00000541591 BARGINQ6ZT62 677 aa19.87■□□□□ 0.77
SUDS3-203ENST00000541591 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
SUDS3-203ENST00000541591 SRCAPQ6ZRS2 3230 aa19.87■□□□□ 0.77
SUDS3-203ENST00000541591 A0A1W2PP64 1363 aa19.86■□□□□ 0.77
SUDS3-203ENST00000541591 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
SUDS3-203ENST00000541591 EZH2Q15910 746 aaKnown RBP19.86■□□□□ 0.77
SUDS3-203ENST00000541591 TOM1L2Q6ZVM7 507 aa19.86■□□□□ 0.77
SUDS3-203ENST00000541591 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
SUDS3-203ENST00000541591 MYOM1P52179 1685 aa19.84■□□□□ 0.77
SUDS3-203ENST00000541591 LRP5O75197 1615 aa19.84■□□□□ 0.77
SUDS3-203ENST00000541591 ARHGEF25Q86VW2 580 aa19.84■□□□□ 0.77
SUDS3-203ENST00000541591 FAM196AQ6ZSG2 479 aa19.83■□□□□ 0.77
SUDS3-203ENST00000541591 CSB-PGBD3P0DP91 1061 aa19.82■□□□□ 0.76
SUDS3-203ENST00000541591 TESK2Q96S53 571 aa19.82■□□□□ 0.76
SUDS3-203ENST00000541591 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SUDS3-203ENST00000541591 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
SUDS3-203ENST00000541591 APBA3O96018 575 aa19.81■□□□□ 0.76
SUDS3-203ENST00000541591 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
SUDS3-203ENST00000541591 KCNH5Q8NCM2 988 aa19.81■□□□□ 0.76
SUDS3-203ENST00000541591 EDC4Q6P2E9 1401 aaKnown RBP19.81■□□□□ 0.76
SUDS3-203ENST00000541591 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
SUDS3-203ENST00000541591 THRAP3Q9Y2W1 955 aaKnown RBP19.8■□□□□ 0.76
SUDS3-203ENST00000541591 USP47Q96K76 1375 aa19.8■□□□□ 0.76
SUDS3-203ENST00000541591 USP31Q70CQ4 1352 aa19.79■□□□□ 0.76
SUDS3-203ENST00000541591 FAM208AQ9UK61 1670 aaKnown RBP19.78■□□□□ 0.76
SUDS3-203ENST00000541591 RGPD3A6NKT7 1758 aaPredicted RBP19.78■□□□□ 0.76
SUDS3-203ENST00000541591 RGPD4Q7Z3J3 1758 aa19.78■□□□□ 0.76
SUDS3-203ENST00000541591 ABCC6O95255 1503 aa19.78■□□□□ 0.76
SUDS3-203ENST00000541591 R3HDM1Q15032 1099 aaKnown RBP19.78■□□□□ 0.76
SUDS3-203ENST00000541591 OVOS2A0A0G2JMS6 1433 aa19.77■□□□□ 0.76
SUDS3-203ENST00000541591 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
SUDS3-203ENST00000541591 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.76
SUDS3-203ENST00000541591 DDB1Q16531 1140 aa19.76■□□□□ 0.75
SUDS3-203ENST00000541591 PTF1AQ7RTS3 328 aa19.76■□□□□ 0.75
SUDS3-203ENST00000541591 CAMKK2Q96RR4 588 aa19.76■□□□□ 0.75
SUDS3-203ENST00000541591 TERF2IPQ9NYB0 399 aa19.76■□□□□ 0.75
SUDS3-203ENST00000541591 BTAF1O14981 1849 aa19.75■□□□□ 0.75
SUDS3-203ENST00000541591 FBLN1P23142 703 aa19.75■□□□□ 0.75
SUDS3-203ENST00000541591 SHANK3Q9BYB0 1731 aa19.75■□□□□ 0.75
SUDS3-203ENST00000541591 NHSQ6T4R5 1651 aa19.75■□□□□ 0.75
SUDS3-203ENST00000541591 MARCH10Q8NA82 808 aaPredicted RBP19.73■□□□□ 0.75
SUDS3-203ENST00000541591 CARD10Q9BWT7 1032 aa19.72■□□□□ 0.75
SUDS3-203ENST00000541591 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
SUDS3-203ENST00000541591 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
SUDS3-203ENST00000541591 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
SUDS3-203ENST00000541591 TNS2Q63HR2 1409 aa19.7■□□□□ 0.74
SUDS3-203ENST00000541591 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
SUDS3-203ENST00000541591 ANKRD24Q8TF21 1146 aa19.7■□□□□ 0.74
SUDS3-203ENST00000541591 ERBB3P21860 1342 aa19.7■□□□□ 0.74
SUDS3-203ENST00000541591 CCDC7Q96M83 1385 aa19.69■□□□□ 0.74
SUDS3-203ENST00000541591 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
SUDS3-203ENST00000541591 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
SUDS3-203ENST00000541591 TMF1P82094 1093 aa19.67■□□□□ 0.74
SUDS3-203ENST00000541591 CASZ1Q86V15 1759 aa19.67■□□□□ 0.74
SUDS3-203ENST00000541591 PUS7Q96PZ0 661 aaKnown RBP19.66■□□□□ 0.74
SUDS3-203ENST00000541591 GGNBP2Q9H3C7 697 aa19.66■□□□□ 0.74
SUDS3-203ENST00000541591 PARD3Q8TEW0 1356 aa19.66■□□□□ 0.74
SUDS3-203ENST00000541591 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
SUDS3-203ENST00000541591 ACSBG1Q96GR2 724 aa19.65■□□□□ 0.74
SUDS3-203ENST00000541591 COG3Q96JB2 828 aa19.65■□□□□ 0.74
SUDS3-203ENST00000541591 EXOC5O00471 708 aa19.64■□□□□ 0.73
SUDS3-203ENST00000541591 CDCA7Q9BWT1 371 aaPredicted RBP19.64■□□□□ 0.73
SUDS3-203ENST00000541591 MAP3K19Q56UN5 1328 aa19.64■□□□□ 0.73
SUDS3-203ENST00000541591 TUBGCP6Q96RT7 1819 aa19.63■□□□□ 0.73
SUDS3-203ENST00000541591 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
SUDS3-203ENST00000541591 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
SUDS3-203ENST00000541591 KCNQ2O43526 872 aa19.62■□□□□ 0.73
SUDS3-203ENST00000541591 IL2RBP14784 551 aa19.61■□□□□ 0.73
SUDS3-203ENST00000541591 IP6K1Q92551 441 aa19.61■□□□□ 0.73
SUDS3-203ENST00000541591 NSD3Q9BZ95 1437 aa19.6■□□□□ 0.73
SUDS3-203ENST00000541591 HOXC9P31274 260 aa19.6■□□□□ 0.73
SUDS3-203ENST00000541591 AMPHP49418 695 aa19.6■□□□□ 0.73
SUDS3-203ENST00000541591 BCL11BQ9C0K0 894 aaPredicted RBP19.6■□□□□ 0.73
SUDS3-203ENST00000541591 ANO8Q9HCE9 1232 aaPredicted RBP19.6■□□□□ 0.73
SUDS3-203ENST00000541591 FYB1O15117 783 aa19.59■□□□□ 0.73
SUDS3-203ENST00000541591 MEGF6O75095 1541 aa19.58■□□□□ 0.73
SUDS3-203ENST00000541591 NBPF14Q5TI25 921 aa19.58■□□□□ 0.72
SUDS3-203ENST00000541591 USHBP1Q8N6Y0 703 aa19.58■□□□□ 0.72
SUDS3-203ENST00000541591 ITGB4P16144 1822 aa19.58■□□□□ 0.72
SUDS3-203ENST00000541591 PROM2Q8N271 834 aa19.57■□□□□ 0.72
SUDS3-203ENST00000541591 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
SUDS3-203ENST00000541591 PAPPAQ13219 1627 aa19.57■□□□□ 0.72
SUDS3-203ENST00000541591 BCL9O00512 1426 aa19.57■□□□□ 0.72
SUDS3-203ENST00000541591 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-203ENST00000541591 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
SUDS3-203ENST00000541591 PDGFDQ9GZP0 370 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-203ENST00000541591 LY75O60449 1722 aa19.56■□□□□ 0.72
SUDS3-203ENST00000541591 DDX54Q8TDD1 881 aaKnown RBP19.55■□□□□ 0.72
SUDS3-203ENST00000541591 TOGARAM1Q9Y4F4 1720 aa19.54■□□□□ 0.72
SUDS3-203ENST00000541591 PLSCR1O15162 318 aa19.54■□□□□ 0.72
SUDS3-203ENST00000541591 SLC24A1O60721 1099 aa19.54■□□□□ 0.72
SUDS3-203ENST00000541591 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
SUDS3-203ENST00000541591 TXNRD1Q16881 649 aa19.53■□□□□ 0.72
SUDS3-203ENST00000541591 RTL1A6NKG5 1358 aa19.53■□□□□ 0.72
SUDS3-203ENST00000541591 CDCA8Q53HL2 280 aa19.52■□□□□ 0.72
SUDS3-203ENST00000541591 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
SUDS3-203ENST00000541591 NBPF6Q5VWK0 638 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms