RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GNAI1P63096 354 aa18.77■□□□□ 0.6
VARS2-211ENST00000541562 TBC1D9Q6ZT07 1266 aa18.77■□□□□ 0.6
VARS2-211ENST00000541562 EXOC6BQ9Y2D4 811 aa18.77■□□□□ 0.6
VARS2-211ENST00000541562 ACEP12821 1306 aa18.77■□□□□ 0.59
VARS2-211ENST00000541562 EIF2S2P20042 333 aaKnown RBP18.76■□□□□ 0.59
VARS2-211ENST00000541562 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
VARS2-211ENST00000541562 ANXA1P04083 346 aa18.76■□□□□ 0.59
VARS2-211ENST00000541562 MLH3Q9UHC1 1453 aa18.76■□□□□ 0.59
VARS2-211ENST00000541562 MYO5BQ9ULV0 1848 aa18.75■□□□□ 0.59
VARS2-211ENST00000541562 IQSEC2Q5JU85 1478 aa18.75■□□□□ 0.59
VARS2-211ENST00000541562 LTKP29376 864 aa18.75■□□□□ 0.59
VARS2-211ENST00000541562 NUCB1Q02818 461 aa18.75■□□□□ 0.59
VARS2-211ENST00000541562 HECW2Q9P2P5 1572 aa18.75■□□□□ 0.59
VARS2-211ENST00000541562 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
VARS2-211ENST00000541562 SMC5Q8IY18 1101 aa18.74■□□□□ 0.59
VARS2-211ENST00000541562 LARP6Q9BRS8 491 aaKnown RBP18.74■□□□□ 0.59
VARS2-211ENST00000541562 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
VARS2-211ENST00000541562 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
VARS2-211ENST00000541562 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
VARS2-211ENST00000541562 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
VARS2-211ENST00000541562 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
VARS2-211ENST00000541562 MCM4P33991 863 aa18.73■□□□□ 0.59
VARS2-211ENST00000541562 TRAK2O60296 914 aa18.73■□□□□ 0.59
VARS2-211ENST00000541562 NLRP6P59044 892 aa18.72■□□□□ 0.59
VARS2-211ENST00000541562 HDAC1Q13547 482 aaPredicted RBP18.72■□□□□ 0.59
VARS2-211ENST00000541562 RTF1Q92541 710 aaKnown RBP18.72■□□□□ 0.59
VARS2-211ENST00000541562 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
VARS2-211ENST00000541562 PPLO60437 1756 aa18.71■□□□□ 0.59
VARS2-211ENST00000541562 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
VARS2-211ENST00000541562 PTPRMP28827 1452 aa18.7■□□□□ 0.58
VARS2-211ENST00000541562 SSFA2P28290 1259 aa18.7■□□□□ 0.58
VARS2-211ENST00000541562 ARAP3Q8WWN8 1544 aa18.7■□□□□ 0.58
VARS2-211ENST00000541562 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
VARS2-211ENST00000541562 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
VARS2-211ENST00000541562 GSPT1P15170 499 aaKnown RBP18.69■□□□□ 0.58
VARS2-211ENST00000541562 CFAP44Q96MT7 982 aa18.69■□□□□ 0.58
VARS2-211ENST00000541562 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
VARS2-211ENST00000541562 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
VARS2-211ENST00000541562 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
VARS2-211ENST00000541562 TRIM6-TRIM34B2RNG4 842 aa18.68■□□□□ 0.58
VARS2-211ENST00000541562 PKP1Q13835 747 aa18.68■□□□□ 0.58
VARS2-211ENST00000541562 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
VARS2-211ENST00000541562 NINLQ9Y2I6 1382 aa18.68■□□□□ 0.58
VARS2-211ENST00000541562 GAS2L2Q8NHY3 880 aa18.68■□□□□ 0.58
VARS2-211ENST00000541562 TNPO1Q92973 898 aaKnown RBP18.68■□□□□ 0.58
VARS2-211ENST00000541562 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
VARS2-211ENST00000541562 NSD2O96028 1365 aa18.67■□□□□ 0.58
VARS2-211ENST00000541562 GOLGA6L3A6NEY3 463 aa18.67■□□□□ 0.58
VARS2-211ENST00000541562 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
VARS2-211ENST00000541562 AMOTL2Q9Y2J4 779 aa18.67■□□□□ 0.58
VARS2-211ENST00000541562 MPNDQ8N594 471 aa18.66■□□□□ 0.58
VARS2-211ENST00000541562 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
VARS2-211ENST00000541562 DIP2CQ9Y2E4 1556 aa18.66■□□□□ 0.58
VARS2-211ENST00000541562 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
VARS2-211ENST00000541562 TTC21BQ7Z4L5 1316 aa18.65■□□□□ 0.58
VARS2-211ENST00000541562 LRRC7Q96NW7 1537 aa18.65■□□□□ 0.58
VARS2-211ENST00000541562 SETD1BQ9UPS6 1966 aaKnown RBP18.65■□□□□ 0.58
VARS2-211ENST00000541562 ALDH1L2Q3SY69 923 aa18.65■□□□□ 0.58
VARS2-211ENST00000541562 ZMYM3Q14202 1370 aa18.65■□□□□ 0.58
VARS2-211ENST00000541562 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.57
VARS2-211ENST00000541562 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
VARS2-211ENST00000541562 ROBO2Q9HCK4 1378 aa18.64■□□□□ 0.57
VARS2-211ENST00000541562 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
VARS2-211ENST00000541562 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
VARS2-211ENST00000541562 ZC3H13Q5T200 1668 aaKnown RBP18.63■□□□□ 0.57
VARS2-211ENST00000541562 PLEKHM2Q8IWE5 1019 aa18.63■□□□□ 0.57
VARS2-211ENST00000541562 ABTB2Q8N961 1025 aa18.63■□□□□ 0.57
VARS2-211ENST00000541562 KIAA1210Q9ULL0 1709 aa18.63■□□□□ 0.57
VARS2-211ENST00000541562 RRAGDQ9NQL2 400 aaPredicted RBP18.63■□□□□ 0.57
VARS2-211ENST00000541562 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
VARS2-211ENST00000541562 ZGPATQ8N5A5 531 aaKnown RBP18.62■□□□□ 0.57
VARS2-211ENST00000541562 IFT172Q9UG01 1749 aa18.62■□□□□ 0.57
VARS2-211ENST00000541562 MCTP1Q6DN14 999 aa18.62■□□□□ 0.57
VARS2-211ENST00000541562 API5Q9BZZ5 524 aaKnown RBP18.62■□□□□ 0.57
VARS2-211ENST00000541562 CPS1P31327 1500 aa18.62■□□□□ 0.57
VARS2-211ENST00000541562 LMTK2Q8IWU2 1503 aa18.61■□□□□ 0.57
VARS2-211ENST00000541562 SETBP1Q9Y6X0 1596 aa18.61■□□□□ 0.57
VARS2-211ENST00000541562 SDSP20132 328 aa18.61■□□□□ 0.57
VARS2-211ENST00000541562 MSH6P52701 1360 aa18.61■□□□□ 0.57
VARS2-211ENST00000541562 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
VARS2-211ENST00000541562 CALD1Q05682 793 aaKnown RBP18.61■□□□□ 0.57
VARS2-211ENST00000541562 NUTM1Q86Y26 1132 aa18.61■□□□□ 0.57
VARS2-211ENST00000541562 EYA1Q99502 592 aa18.61■□□□□ 0.57
VARS2-211ENST00000541562 KIF2CQ99661 725 aa18.6■□□□□ 0.57
VARS2-211ENST00000541562 UPF3BQ9BZI7 483 aaKnown RBP18.6■□□□□ 0.57
VARS2-211ENST00000541562 IL16Q14005 1332 aa18.59■□□□□ 0.57
VARS2-211ENST00000541562 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
VARS2-211ENST00000541562 COL3A1P02461 1466 aaPredicted RBP18.59■□□□□ 0.57
VARS2-211ENST00000541562 ARHGEF40Q8TER5 1519 aa18.58■□□□□ 0.57
VARS2-211ENST00000541562 CDC45O75419 566 aa18.58■□□□□ 0.57
VARS2-211ENST00000541562 GAS2L3Q86XJ1 694 aa18.58■□□□□ 0.57
VARS2-211ENST00000541562 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.57
VARS2-211ENST00000541562 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.57
VARS2-211ENST00000541562 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
VARS2-211ENST00000541562 LMOD3Q0VAK6 560 aa18.58■□□□□ 0.56
VARS2-211ENST00000541562 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.56
VARS2-211ENST00000541562 CEP85Q6P2H3 762 aa18.58■□□□□ 0.56
VARS2-211ENST00000541562 GCC1Q96CN9 775 aa18.58■□□□□ 0.56
VARS2-211ENST00000541562 NAP1L5Q96NT1 182 aaPredicted RBP18.57■□□□□ 0.56
VARS2-211ENST00000541562 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms