RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CCDC116Q8IYX3 515 aa8.27□□□□□ -1.09
MDM2-227ENST00000540709 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
MDM2-227ENST00000540709 MAP4K5Q9Y4K4 846 aa8.27□□□□□ -1.09
MDM2-227ENST00000540709 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
MDM2-227ENST00000540709 ZFP42Q96MM3 310 aa8.26□□□□□ -1.09
MDM2-227ENST00000540709 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
MDM2-227ENST00000540709 PCDHB9Q9Y5E1 797 aa8.26□□□□□ -1.09
MDM2-227ENST00000540709 MRPL14Q6P1L8 145 aaKnown RBP8.25□□□□□ -1.09
MDM2-227ENST00000540709 MTMR14Q8NCE2 650 aa8.25□□□□□ -1.09
MDM2-227ENST00000540709 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
MDM2-227ENST00000540709 TRIM47Q96LD4 638 aa8.25□□□□□ -1.09
MDM2-227ENST00000540709 KLF16Q9BXK1 252 aaPredicted RBP8.25□□□□□ -1.09
MDM2-227ENST00000540709 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
MDM2-227ENST00000540709 ZBBXA8MT70 800 aa8.24□□□□□ -1.09
MDM2-227ENST00000540709 UPP2O95045 317 aa8.24□□□□□ -1.09
MDM2-227ENST00000540709 PPP1R26Q5T8A7 1209 aaPredicted RBP8.24□□□□□ -1.09
MDM2-227ENST00000540709 CDV3Q9UKY7 258 aaKnown RBP8.24□□□□□ -1.09
MDM2-227ENST00000540709 APBB1O00213 710 aa8.23□□□□□ -1.09
MDM2-227ENST00000540709 FBXO45P0C2W1 286 aa8.23□□□□□ -1.09
MDM2-227ENST00000540709 BMP2P12643 396 aa8.23□□□□□ -1.09
MDM2-227ENST00000540709 NBPF20Q3BBV1 942 aa8.23□□□□□ -1.09
MDM2-227ENST00000540709 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
MDM2-227ENST00000540709 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
MDM2-227ENST00000540709 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
MDM2-227ENST00000540709 CBLBQ13191 982 aa8.22□□□□□ -1.09
MDM2-227ENST00000540709 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
MDM2-227ENST00000540709 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
MDM2-227ENST00000540709 PRM3Q9NNZ6 103 aa8.2□□□□□ -1.1
MDM2-227ENST00000540709 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
MDM2-227ENST00000540709 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
MDM2-227ENST00000540709 TBC1D2BQ9UPU7 963 aa8.19□□□□□ -1.1
MDM2-227ENST00000540709 NR1H3Q13133 447 aa8.18□□□□□ -1.1
MDM2-227ENST00000540709 MEIOBQ8N635 442 aa8.18□□□□□ -1.1
MDM2-227ENST00000540709 AGBL1Q96MI9 1066 aa8.18□□□□□ -1.1
MDM2-227ENST00000540709 ZNF330Q9Y3S2 320 aaPredicted RBP8.18□□□□□ -1.1
MDM2-227ENST00000540709 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
MDM2-227ENST00000540709 MAN1A2O60476 641 aa8.17□□□□□ -1.1
MDM2-227ENST00000540709 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
MDM2-227ENST00000540709 RELBQ01201 579 aa8.17□□□□□ -1.1
MDM2-227ENST00000540709 TSEN34Q9BSV6 310 aaKnown RBP8.17□□□□□ -1.1
MDM2-227ENST00000540709 ABL2P42684 1182 aa8.16□□□□□ -1.1
MDM2-227ENST00000540709 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
MDM2-227ENST00000540709 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.1
MDM2-227ENST00000540709 WFS1O76024 890 aa8.15□□□□□ -1.1
MDM2-227ENST00000540709 VEGFBP49765 207 aa8.15□□□□□ -1.1
MDM2-227ENST00000540709 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
MDM2-227ENST00000540709 GDPD2Q9HCC8 539 aa8.15□□□□□ -1.1
MDM2-227ENST00000540709 CYLDQ9NQC7 956 aa8.15□□□□□ -1.1
MDM2-227ENST00000540709 TERTO14746 1132 aaKnown RBP8.14□□□□□ -1.11
MDM2-227ENST00000540709 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
MDM2-227ENST00000540709 GPR37L1O60883 481 aa8.13□□□□□ -1.11
MDM2-227ENST00000540709 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
MDM2-227ENST00000540709 ESPNB1AK53 854 aa8.12□□□□□ -1.11
MDM2-227ENST00000540709 SOCS7O14512 581 aa8.12□□□□□ -1.11
MDM2-227ENST00000540709 Q6ZVU0 165 aa8.12□□□□□ -1.11
MDM2-227ENST00000540709 NXF1Q9UBU9 619 aaKnown RBP8.12□□□□□ -1.11
MDM2-227ENST00000540709 TTLL8A6PVC2 850 aa8.11□□□□□ -1.11
MDM2-227ENST00000540709 ADD1P35611 737 aaKnown RBP8.11□□□□□ -1.11
MDM2-227ENST00000540709 VAC14Q08AM6 782 aa8.11□□□□□ -1.11
MDM2-227ENST00000540709 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
MDM2-227ENST00000540709 SEPT12Q8IYM1 358 aa8.11□□□□□ -1.11
MDM2-227ENST00000540709 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
MDM2-227ENST00000540709 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
MDM2-227ENST00000540709 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
MDM2-227ENST00000540709 LILRA1O75019 489 aa8.1□□□□□ -1.11
MDM2-227ENST00000540709 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
MDM2-227ENST00000540709 MCM6Q14566 821 aa8.1□□□□□ -1.11
MDM2-227ENST00000540709 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
MDM2-227ENST00000540709 DNMT3LQ9UJW3 386 aa8.1□□□□□ -1.11
MDM2-227ENST00000540709 PCDHB11Q9Y5F2 797 aa8.1□□□□□ -1.11
MDM2-227ENST00000540709 SOS2Q07890 1332 aaPredicted RBP8.09□□□□□ -1.11
MDM2-227ENST00000540709 ADH1AP07327 375 aa8.09□□□□□ -1.11
MDM2-227ENST00000540709 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
MDM2-227ENST00000540709 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
MDM2-227ENST00000540709 IRF5Q13568 498 aa8.09□□□□□ -1.11
MDM2-227ENST00000540709 SPINT1O43278 529 aa8.08□□□□□ -1.12
MDM2-227ENST00000540709 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
MDM2-227ENST00000540709 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
MDM2-227ENST00000540709 PTGIRP43119 386 aa8.07□□□□□ -1.12
MDM2-227ENST00000540709 TRIM52Q96A61 297 aa8.07□□□□□ -1.12
MDM2-227ENST00000540709 MEN1O00255 615 aa8.06□□□□□ -1.12
MDM2-227ENST00000540709 RAD21O60216 631 aa8.06□□□□□ -1.12
MDM2-227ENST00000540709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
MDM2-227ENST00000540709 CC2D2BQ6DHV5 1058 aa8.06□□□□□ -1.12
MDM2-227ENST00000540709 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
MDM2-227ENST00000540709 SCTRP47872 440 aa8.05□□□□□ -1.12
MDM2-227ENST00000540709 TMEM132AQ24JP5 1023 aa8.05□□□□□ -1.12
MDM2-227ENST00000540709 SLFNL1Q499Z3 407 aa8.05□□□□□ -1.12
MDM2-227ENST00000540709 COG6Q9Y2V7 657 aa8.05□□□□□ -1.12
MDM2-227ENST00000540709 UBTFP17480 764 aaKnown RBP8.04□□□□□ -1.12
MDM2-227ENST00000540709 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
MDM2-227ENST00000540709 WASHC4Q2M389 1173 aa8.04□□□□□ -1.12
MDM2-227ENST00000540709 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
MDM2-227ENST00000540709 PTSQ03393 145 aa8.03□□□□□ -1.12
MDM2-227ENST00000540709 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
MDM2-227ENST00000540709 RNF135Q8IUD6 432 aa8.03□□□□□ -1.12
MDM2-227ENST00000540709 WWC1Q8IX03 1113 aa8.03□□□□□ -1.12
MDM2-227ENST00000540709 KDF1Q8NAX2 398 aaPredicted RBP8.03□□□□□ -1.12
MDM2-227ENST00000540709 IRF7Q92985 503 aa8.03□□□□□ -1.12
MDM2-227ENST00000540709 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms