RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.3
TRAPPC1-202ENST00000540486 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
TRAPPC1-202ENST00000540486 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
TRAPPC1-202ENST00000540486 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAPPC1-202ENST00000540486 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
TRAPPC1-202ENST00000540486 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-202ENST00000540486 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
TRAPPC1-202ENST00000540486 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
TRAPPC1-202ENST00000540486 C14orf93Q9H972 538 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-202ENST00000540486 POGKQ9P215 609 aa13.12□□□□□ -0.31
TRAPPC1-202ENST00000540486 PIK3C2GO75747 1445 aa13.12□□□□□ -0.31
TRAPPC1-202ENST00000540486 DDB1Q16531 1140 aa13.11□□□□□ -0.31
TRAPPC1-202ENST00000540486 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
TRAPPC1-202ENST00000540486 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
TRAPPC1-202ENST00000540486 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
TRAPPC1-202ENST00000540486 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC1-202ENST00000540486 BCL9O00512 1426 aa13.1□□□□□ -0.31
TRAPPC1-202ENST00000540486 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
TRAPPC1-202ENST00000540486 CPDO75976 1380 aa13.08□□□□□ -0.31
TRAPPC1-202ENST00000540486 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-202ENST00000540486 ATP7BP35670 1465 aa13.08□□□□□ -0.32
TRAPPC1-202ENST00000540486 PRR36Q9H6K5 1346 aa13.08□□□□□ -0.32
TRAPPC1-202ENST00000540486 PEAK1Q9H792 1746 aa13.08□□□□□ -0.32
TRAPPC1-202ENST00000540486 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
TRAPPC1-202ENST00000540486 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
TRAPPC1-202ENST00000540486 SLC16A10Q8TF71 515 aa13.07□□□□□ -0.32
TRAPPC1-202ENST00000540486 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-202ENST00000540486 POLD1P28340 1107 aa13.06□□□□□ -0.32
TRAPPC1-202ENST00000540486 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC1-202ENST00000540486 CRB1P82279 1406 aa13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 CFAP70Q5T0N1 1121 aa13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC1-202ENST00000540486 APLP1P51693 650 aa13.04□□□□□ -0.32
TRAPPC1-202ENST00000540486 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
TRAPPC1-202ENST00000540486 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
TRAPPC1-202ENST00000540486 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
TRAPPC1-202ENST00000540486 PRELPP51888 382 aa13.03□□□□□ -0.32
TRAPPC1-202ENST00000540486 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC1-202ENST00000540486 DNAJC5GQ8N7S2 189 aa13.02□□□□□ -0.33
TRAPPC1-202ENST00000540486 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
TRAPPC1-202ENST00000540486 COL5A2P05997 1499 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC1-202ENST00000540486 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.33
TRAPPC1-202ENST00000540486 GCP02774 474 aa13.01□□□□□ -0.33
TRAPPC1-202ENST00000540486 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 15.1
TRAPPC1-202ENST00000540486 NLGN2Q8NFZ4 835 aa13.01□□□□□ -0.33
TRAPPC1-202ENST00000540486 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC1-202ENST00000540486 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
TRAPPC1-202ENST00000540486 USP19O94966 1318 aa13□□□□□ -0.33
TRAPPC1-202ENST00000540486 COL13A1Q5TAT6 717 aaPredicted RBP13□□□□□ -0.33
TRAPPC1-202ENST00000540486 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
TRAPPC1-202ENST00000540486 NLRP13Q86W25 1043 aa13□□□□□ -0.33
TRAPPC1-202ENST00000540486 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
TRAPPC1-202ENST00000540486 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
TRAPPC1-202ENST00000540486 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
TRAPPC1-202ENST00000540486 EXOC5O00471 708 aa12.98□□□□□ -0.33
TRAPPC1-202ENST00000540486 SLC34A2O95436 690 aa12.98□□□□□ -0.33
TRAPPC1-202ENST00000540486 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
TRAPPC1-202ENST00000540486 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-202ENST00000540486 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
TRAPPC1-202ENST00000540486 ADCY9O60503 1353 aa12.96□□□□□ -0.33
TRAPPC1-202ENST00000540486 ACEP12821 1306 aa12.96□□□□□ -0.33
TRAPPC1-202ENST00000540486 ZNF827Q17R98 1081 aa12.96□□□□□ -0.33
TRAPPC1-202ENST00000540486 TNS4Q8IZW8 715 aa12.96□□□□□ -0.33
TRAPPC1-202ENST00000540486 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC1-202ENST00000540486 KIF3CO14782 793 aa12.95□□□□□ -0.34
TRAPPC1-202ENST00000540486 WDR17Q8IZU2 1322 aa12.94□□□□□ -0.34
TRAPPC1-202ENST00000540486 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
TRAPPC1-202ENST00000540486 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
TRAPPC1-202ENST00000540486 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
TRAPPC1-202ENST00000540486 LRRC4BQ9NT99 713 aa12.93□□□□□ -0.34
TRAPPC1-202ENST00000540486 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 PAPPAQ13219 1627 aa12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 TOMM70O94826 608 aa12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC1-202ENST00000540486 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
TRAPPC1-202ENST00000540486 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
TRAPPC1-202ENST00000540486 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
TRAPPC1-202ENST00000540486 KLRG1Q96E93 195 aa12.9□□□□□ -0.34
TRAPPC1-202ENST00000540486 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
TRAPPC1-202ENST00000540486 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
TRAPPC1-202ENST00000540486 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.34
TRAPPC1-202ENST00000540486 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
TRAPPC1-202ENST00000540486 COL24A1Q17RW2 1714 aa12.9□□□□□ -0.34
TRAPPC1-202ENST00000540486 USP6P35125 1406 aa12.89□□□□□ -0.35
TRAPPC1-202ENST00000540486 AXIN2Q9Y2T1 843 aa12.89□□□□□ -0.35
TRAPPC1-202ENST00000540486 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
TRAPPC1-202ENST00000540486 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
TRAPPC1-202ENST00000540486 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
TRAPPC1-202ENST00000540486 NLRP6P59044 892 aa12.88□□□□□ -0.35
TRAPPC1-202ENST00000540486 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
TRAPPC1-202ENST00000540486 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
TRAPPC1-202ENST00000540486 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms