RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
TMEM258-205ENST00000540434 STK32BQ9NY57 414 aa16.24■□□□□ 0.19
TMEM258-205ENST00000540434 ITSN1Q15811 1721 aa16.24■□□□□ 0.19
TMEM258-205ENST00000540434 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
TMEM258-205ENST00000540434 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
TMEM258-205ENST00000540434 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
TMEM258-205ENST00000540434 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
TMEM258-205ENST00000540434 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
TMEM258-205ENST00000540434 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
TMEM258-205ENST00000540434 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
TMEM258-205ENST00000540434 CABP2Q9NPB3 220 aa16.22■□□□□ 0.19
TMEM258-205ENST00000540434 ATP7BP35670 1465 aa16.22■□□□□ 0.19
TMEM258-205ENST00000540434 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
TMEM258-205ENST00000540434 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
TMEM258-205ENST00000540434 THRAP3Q9Y2W1 955 aaKnown RBP16.21■□□□□ 0.19
TMEM258-205ENST00000540434 CPDO75976 1380 aa16.19■□□□□ 0.18
TMEM258-205ENST00000540434 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
TMEM258-205ENST00000540434 C11orf95C9JLR9 678 aaPredicted RBP16.18■□□□□ 0.18
TMEM258-205ENST00000540434 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
TMEM258-205ENST00000540434 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
TMEM258-205ENST00000540434 TOPAZ1Q8N9V7 1692 aa16.17■□□□□ 0.18
TMEM258-205ENST00000540434 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
TMEM258-205ENST00000540434 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
TMEM258-205ENST00000540434 ZBTB7CA1YPR0 619 aa16.16■□□□□ 0.18
TMEM258-205ENST00000540434 DDB1Q16531 1140 aa16.16■□□□□ 0.18
TMEM258-205ENST00000540434 TESK2Q96S53 571 aa16.16■□□□□ 0.18
TMEM258-205ENST00000540434 COL5A2P05997 1499 aaPredicted RBP16.16■□□□□ 0.18
TMEM258-205ENST00000540434 MAP3K5Q99683 1374 aa16.15■□□□□ 0.18
TMEM258-205ENST00000540434 SRPK2P78362 688 aaKnown RBP16.15■□□□□ 0.18
TMEM258-205ENST00000540434 NLGN2Q8NFZ4 835 aa16.15■□□□□ 0.18
TMEM258-205ENST00000540434 USP19O94966 1318 aa16.15■□□□□ 0.18
TMEM258-205ENST00000540434 ACEP12821 1306 aa16.15■□□□□ 0.18
TMEM258-205ENST00000540434 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
TMEM258-205ENST00000540434 HSPA6P17066 643 aa16.14■□□□□ 0.17
TMEM258-205ENST00000540434 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
TMEM258-205ENST00000540434 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
TMEM258-205ENST00000540434 CRB1P82279 1406 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 CAPN15O75808 1086 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 GCP02774 474 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.172e-36■□□□□ 10.4
TMEM258-205ENST00000540434 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
TMEM258-205ENST00000540434 PPIP5K1Q6PFW1 1433 aa16.11■□□□□ 0.17
TMEM258-205ENST00000540434 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
TMEM258-205ENST00000540434 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
TMEM258-205ENST00000540434 USP47Q96K76 1375 aa16.11■□□□□ 0.17
TMEM258-205ENST00000540434 BCL9O00512 1426 aa16.11■□□□□ 0.17
TMEM258-205ENST00000540434 COL18A1P39060 1754 aa16.1■□□□□ 0.17
TMEM258-205ENST00000540434 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
TMEM258-205ENST00000540434 SBNO2Q9Y2G9 1366 aa16.1■□□□□ 0.17
TMEM258-205ENST00000540434 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
TMEM258-205ENST00000540434 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
TMEM258-205ENST00000540434 ACSBG1Q96GR2 724 aa16.07■□□□□ 0.16
TMEM258-205ENST00000540434 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
TMEM258-205ENST00000540434 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
TMEM258-205ENST00000540434 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
TMEM258-205ENST00000540434 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
TMEM258-205ENST00000540434 GPBP1L1Q9HC44 474 aaPredicted RBP16.06■□□□□ 0.16
TMEM258-205ENST00000540434 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
TMEM258-205ENST00000540434 LRRC4BQ9NT99 713 aa16.04■□□□□ 0.16
TMEM258-205ENST00000540434 AXIN2Q9Y2T1 843 aa16.04■□□□□ 0.16
TMEM258-205ENST00000540434 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
TMEM258-205ENST00000540434 COL13A1Q5TAT6 717 aaPredicted RBP16.03■□□□□ 0.16
TMEM258-205ENST00000540434 SLIT3O75094 1523 aa16.03■□□□□ 0.16
TMEM258-205ENST00000540434 USP6P35125 1406 aa16.02■□□□□ 0.15
TMEM258-205ENST00000540434 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.15
TMEM258-205ENST00000540434 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
TMEM258-205ENST00000540434 POLD1P28340 1107 aa16.01■□□□□ 0.15
TMEM258-205ENST00000540434 CDCA7Q9BWT1 371 aaPredicted RBP16.01■□□□□ 0.15
TMEM258-205ENST00000540434 COL24A1Q17RW2 1714 aa16.01■□□□□ 0.15
TMEM258-205ENST00000540434 GRIN3BO60391 1043 aa16■□□□□ 0.15
TMEM258-205ENST00000540434 TMC1Q8TDI8 760 aa16■□□□□ 0.15
TMEM258-205ENST00000540434 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
TMEM258-205ENST00000540434 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
TMEM258-205ENST00000540434 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
TMEM258-205ENST00000540434 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
TMEM258-205ENST00000540434 BRD4O60885 1362 aaPredicted RBP15.99■□□□□ 0.15
TMEM258-205ENST00000540434 TTC21BQ7Z4L5 1316 aa15.98■□□□□ 0.15
TMEM258-205ENST00000540434 EXOC5O00471 708 aa15.98■□□□□ 0.15
TMEM258-205ENST00000540434 KCNQ4P56696 695 aa15.98■□□□□ 0.15
TMEM258-205ENST00000540434 NLRP6P59044 892 aa15.98■□□□□ 0.15
TMEM258-205ENST00000540434 DNAJC5GQ8N7S2 189 aa15.98■□□□□ 0.15
TMEM258-205ENST00000540434 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
TMEM258-205ENST00000540434 TMF1P82094 1093 aa15.97■□□□□ 0.15
TMEM258-205ENST00000540434 CARD10Q9BWT7 1032 aa15.97■□□□□ 0.15
TMEM258-205ENST00000540434 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
TMEM258-205ENST00000540434 ADCY9O60503 1353 aa15.97■□□□□ 0.15
TMEM258-205ENST00000540434 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
TMEM258-205ENST00000540434 BTAF1O14981 1849 aa15.96■□□□□ 0.15
TMEM258-205ENST00000540434 KIF3CO14782 793 aa15.96■□□□□ 0.15
TMEM258-205ENST00000540434 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
TMEM258-205ENST00000540434 A0A1W2PP64 1363 aa15.96■□□□□ 0.15
TMEM258-205ENST00000540434 KTN1Q86UP2 1357 aaKnown RBP15.96■□□□□ 0.15
TMEM258-205ENST00000540434 QSER1Q2KHR3 1735 aa15.96■□□□□ 0.15
TMEM258-205ENST00000540434 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
TMEM258-205ENST00000540434 SLC16A10Q8TF71 515 aa15.95■□□□□ 0.14
TMEM258-205ENST00000540434 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
TMEM258-205ENST00000540434 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms