RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ITSN1Q15811 1721 aa11.8□□□□□ -0.52
LRP6-204ENST00000540415 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
LRP6-204ENST00000540415 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
LRP6-204ENST00000540415 NLRP13Q86W25 1043 aa11.79□□□□□ -0.52
LRP6-204ENST00000540415 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
LRP6-204ENST00000540415 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
LRP6-204ENST00000540415 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
LRP6-204ENST00000540415 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
LRP6-204ENST00000540415 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
LRP6-204ENST00000540415 ARXQ96QS3 562 aa11.77□□□□□ -0.53
LRP6-204ENST00000540415 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
LRP6-204ENST00000540415 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
LRP6-204ENST00000540415 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
LRP6-204ENST00000540415 NLRP6P59044 892 aa11.76□□□□□ -0.53
LRP6-204ENST00000540415 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
LRP6-204ENST00000540415 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
LRP6-204ENST00000540415 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
LRP6-204ENST00000540415 BCL9O00512 1426 aa11.75□□□□□ -0.53
LRP6-204ENST00000540415 SLIT3O75094 1523 aa11.75□□□□□ -0.53
LRP6-204ENST00000540415 SOX12O15370 315 aa11.74□□□□□ -0.53
LRP6-204ENST00000540415 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
LRP6-204ENST00000540415 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
LRP6-204ENST00000540415 GPR162Q16538 588 aa11.74□□□□□ -0.53
LRP6-204ENST00000540415 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
LRP6-204ENST00000540415 USP6P35125 1406 aa11.73□□□□□ -0.53
LRP6-204ENST00000540415 KLHL34Q8N239 644 aa11.73□□□□□ -0.53
LRP6-204ENST00000540415 RAB3GAP2Q9H2M9 1393 aa11.73□□□□□ -0.53
LRP6-204ENST00000540415 CABP1Q9NZU7 370 aa11.73□□□□□ -0.53
LRP6-204ENST00000540415 COL18A1P39060 1754 aa11.72□□□□□ -0.53
LRP6-204ENST00000540415 CPSF1Q10570 1443 aaKnown RBP11.72□□□□□ -0.53
LRP6-204ENST00000540415 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
LRP6-204ENST00000540415 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
LRP6-204ENST00000540415 PELP1Q8IZL8 1130 aaKnown RBP11.72□□□□□ -0.53
LRP6-204ENST00000540415 EXOC5O00471 708 aa11.71□□□□□ -0.53
LRP6-204ENST00000540415 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
LRP6-204ENST00000540415 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
LRP6-204ENST00000540415 CARD10Q9BWT7 1032 aa11.71□□□□□ -0.53
LRP6-204ENST00000540415 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.53
LRP6-204ENST00000540415 PAPPAQ13219 1627 aa11.71□□□□□ -0.54
LRP6-204ENST00000540415 WNK3Q9BYP7 1800 aa11.7□□□□□ -0.54
LRP6-204ENST00000540415 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
LRP6-204ENST00000540415 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
LRP6-204ENST00000540415 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
LRP6-204ENST00000540415 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
LRP6-204ENST00000540415 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
LRP6-204ENST00000540415 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
LRP6-204ENST00000540415 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
LRP6-204ENST00000540415 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
LRP6-204ENST00000540415 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
LRP6-204ENST00000540415 CHD4Q14839 1912 aa11.67□□□□□ -0.54
LRP6-204ENST00000540415 YBX3P16989 372 aaKnown RBP eCLIP11.67□□□□□ -0.54
LRP6-204ENST00000540415 KCNQ4P56696 695 aa11.67□□□□□ -0.54
LRP6-204ENST00000540415 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
LRP6-204ENST00000540415 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
LRP6-204ENST00000540415 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
LRP6-204ENST00000540415 NFAT5O94916 1531 aa11.65□□□□□ -0.54
LRP6-204ENST00000540415 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.54
LRP6-204ENST00000540415 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
LRP6-204ENST00000540415 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
LRP6-204ENST00000540415 POLD1P28340 1107 aa11.63□□□□□ -0.55
LRP6-204ENST00000540415 KCNH5Q8NCM2 988 aa11.63□□□□□ -0.55
LRP6-204ENST00000540415 NLRP2Q9NX02 1062 aa11.63□□□□□ -0.55
LRP6-204ENST00000540415 ABCC6O95255 1503 aa11.63□□□□□ -0.55
LRP6-204ENST00000540415 RGPD5Q99666 1765 aa11.63□□□□□ -0.55
LRP6-204ENST00000540415 ERBB3P21860 1342 aa11.61□□□□□ -0.55
LRP6-204ENST00000540415 BTAF1O14981 1849 aa11.61□□□□□ -0.55
LRP6-204ENST00000540415 IL2RBP14784 551 aa11.61□□□□□ -0.55
LRP6-204ENST00000540415 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
LRP6-204ENST00000540415 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
LRP6-204ENST00000540415 QRICH2Q9H0J4 1663 aa11.6□□□□□ -0.55
LRP6-204ENST00000540415 MSL1Q68DK7 614 aa11.6□□□□□ -0.55
LRP6-204ENST00000540415 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
LRP6-204ENST00000540415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
LRP6-204ENST00000540415 DDX54Q8TDD1 881 aaKnown RBP11.59□□□□□ -0.55
LRP6-204ENST00000540415 ANKRD24Q8TF21 1146 aa11.59□□□□□ -0.55
LRP6-204ENST00000540415 KIAA1210Q9ULL0 1709 aa11.59□□□□□ -0.55
LRP6-204ENST00000540415 TTC21AQ8NDW8 1320 aa11.59□□□□□ -0.55
LRP6-204ENST00000540415 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
LRP6-204ENST00000540415 NME9Q86XW9 330 aa11.58□□□□□ -0.56
LRP6-204ENST00000540415 EVC2Q86UK5 1308 aa11.58□□□□□ -0.56
LRP6-204ENST00000540415 KTN1Q86UP2 1357 aaKnown RBP11.57□□□□□ -0.56
LRP6-204ENST00000540415 GRIN3BO60391 1043 aa11.57□□□□□ -0.56
LRP6-204ENST00000540415 HSPA6P17066 643 aa11.57□□□□□ -0.56
LRP6-204ENST00000540415 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
LRP6-204ENST00000540415 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
LRP6-204ENST00000540415 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
LRP6-204ENST00000540415 ZNF692Q9BU19 519 aaPredicted RBP11.57□□□□□ -0.56
LRP6-204ENST00000540415 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
LRP6-204ENST00000540415 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
LRP6-204ENST00000540415 NSD2O96028 1365 aa11.56□□□□□ -0.56
LRP6-204ENST00000540415 TUBGCP6Q96RT7 1819 aa11.56□□□□□ -0.56
LRP6-204ENST00000540415 MSH5O43196 834 aa11.56□□□□□ -0.56
LRP6-204ENST00000540415 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
LRP6-204ENST00000540415 ADCY9O60503 1353 aa11.55□□□□□ -0.56
LRP6-204ENST00000540415 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
LRP6-204ENST00000540415 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
LRP6-204ENST00000540415 CCNL1Q9UK58 526 aaPredicted RBP11.54□□□□□ -0.56
LRP6-204ENST00000540415 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
LRP6-204ENST00000540415 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
LRP6-204ENST00000540415 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms