RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
BNIP3-202ENST00000540159 NUCB1Q02818 461 aa17.15■□□□□ 0.34
BNIP3-202ENST00000540159 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.33
BNIP3-202ENST00000540159 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
BNIP3-202ENST00000540159 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
BNIP3-202ENST00000540159 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
BNIP3-202ENST00000540159 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
BNIP3-202ENST00000540159 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
BNIP3-202ENST00000540159 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
BNIP3-202ENST00000540159 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
BNIP3-202ENST00000540159 IL16Q14005 1332 aa17.13■□□□□ 0.33
BNIP3-202ENST00000540159 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
BNIP3-202ENST00000540159 MAP2P11137 1827 aaKnown RBP17.13■□□□□ 0.33
BNIP3-202ENST00000540159 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
BNIP3-202ENST00000540159 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
BNIP3-202ENST00000540159 GNAI1P63096 354 aa17.12■□□□□ 0.33
BNIP3-202ENST00000540159 FOXO3O43524 673 aa17.12■□□□□ 0.33
BNIP3-202ENST00000540159 CCDC61Q9Y6R9 512 aa17.12■□□□□ 0.33
BNIP3-202ENST00000540159 PRR36Q9H6K5 1346 aa17.12■□□□□ 0.33
BNIP3-202ENST00000540159 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
BNIP3-202ENST00000540159 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
BNIP3-202ENST00000540159 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
BNIP3-202ENST00000540159 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
BNIP3-202ENST00000540159 HSP90AB1P08238 724 aaKnown RBP17.1■□□□□ 0.33
BNIP3-202ENST00000540159 SLC4A10Q6U841 1118 aa17.1■□□□□ 0.33
BNIP3-202ENST00000540159 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
BNIP3-202ENST00000540159 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
BNIP3-202ENST00000540159 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
BNIP3-202ENST00000540159 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.33
BNIP3-202ENST00000540159 CPS1P31327 1500 aa17.08■□□□□ 0.32
BNIP3-202ENST00000540159 MCM4P33991 863 aa17.08■□□□□ 0.32
BNIP3-202ENST00000540159 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
BNIP3-202ENST00000540159 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
BNIP3-202ENST00000540159 F6X3S4 739 aa17.07■□□□□ 0.32
BNIP3-202ENST00000540159 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
BNIP3-202ENST00000540159 EIF5BO60841 1220 aaKnown RBP17.07■□□□□ 0.32
BNIP3-202ENST00000540159 ACEP12821 1306 aa17.06■□□□□ 0.32
BNIP3-202ENST00000540159 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
BNIP3-202ENST00000540159 LTV1Q96GA3 475 aaPredicted RBP17.06■□□□□ 0.32
BNIP3-202ENST00000540159 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
BNIP3-202ENST00000540159 CHMP5Q9NZZ3 219 aa17.05■□□□□ 0.32
BNIP3-202ENST00000540159 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
BNIP3-202ENST00000540159 TRAK2O60296 914 aa17.04■□□□□ 0.32
BNIP3-202ENST00000540159 CALD1Q05682 793 aaKnown RBP17.04■□□□□ 0.32
BNIP3-202ENST00000540159 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
BNIP3-202ENST00000540159 MEIS3Q99687 375 aa17.04■□□□□ 0.32
BNIP3-202ENST00000540159 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
BNIP3-202ENST00000540159 GSPT1P15170 499 aaKnown RBP17.03■□□□□ 0.32
BNIP3-202ENST00000540159 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
BNIP3-202ENST00000540159 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
BNIP3-202ENST00000540159 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
BNIP3-202ENST00000540159 ROBO2Q9HCK4 1378 aa17.03■□□□□ 0.32
BNIP3-202ENST00000540159 EDC4Q6P2E9 1401 aaKnown RBP17.03■□□□□ 0.32
BNIP3-202ENST00000540159 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
BNIP3-202ENST00000540159 LTKP29376 864 aa17.02■□□□□ 0.32
BNIP3-202ENST00000540159 MED14O60244 1454 aa17.02■□□□□ 0.32
BNIP3-202ENST00000540159 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.31
BNIP3-202ENST00000540159 G2E3Q7L622 706 aa17.02■□□□□ 0.31
BNIP3-202ENST00000540159 GCC1Q96CN9 775 aa17.01■□□□□ 0.31
BNIP3-202ENST00000540159 ABCC4O15439 1325 aa17■□□□□ 0.31
BNIP3-202ENST00000540159 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
BNIP3-202ENST00000540159 KIF2CQ99661 725 aa17■□□□□ 0.31
BNIP3-202ENST00000540159 TNPO1Q92973 898 aaKnown RBP17■□□□□ 0.31
BNIP3-202ENST00000540159 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
BNIP3-202ENST00000540159 CPSF1Q10570 1443 aaKnown RBP17■□□□□ 0.31
BNIP3-202ENST00000540159 ANKRD26Q9UPS8 1709 aa17■□□□□ 0.31
BNIP3-202ENST00000540159 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
BNIP3-202ENST00000540159 ATP7BP35670 1465 aa16.99■□□□□ 0.31
BNIP3-202ENST00000540159 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
BNIP3-202ENST00000540159 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
BNIP3-202ENST00000540159 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
BNIP3-202ENST00000540159 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
BNIP3-202ENST00000540159 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
BNIP3-202ENST00000540159 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
BNIP3-202ENST00000540159 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
BNIP3-202ENST00000540159 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
BNIP3-202ENST00000540159 MSH6P52701 1360 aa16.98■□□□□ 0.31
BNIP3-202ENST00000540159 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
BNIP3-202ENST00000540159 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
BNIP3-202ENST00000540159 AMPHP49418 695 aa16.97■□□□□ 0.31
BNIP3-202ENST00000540159 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
BNIP3-202ENST00000540159 NOL8Q76FK4 1167 aaKnown RBP16.97■□□□□ 0.31
BNIP3-202ENST00000540159 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
BNIP3-202ENST00000540159 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
BNIP3-202ENST00000540159 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
BNIP3-202ENST00000540159 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
BNIP3-202ENST00000540159 EXOC6BQ9Y2D4 811 aa16.97■□□□□ 0.31
BNIP3-202ENST00000540159 SSFA2P28290 1259 aa16.96■□□□□ 0.31
BNIP3-202ENST00000540159 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
BNIP3-202ENST00000540159 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
BNIP3-202ENST00000540159 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.31
BNIP3-202ENST00000540159 RTF1Q92541 710 aaKnown RBP16.95■□□□□ 0.3
BNIP3-202ENST00000540159 PTCH1Q13635 1447 aa16.95■□□□□ 0.3
BNIP3-202ENST00000540159 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
BNIP3-202ENST00000540159 CDC45O75419 566 aa16.95■□□□□ 0.3
BNIP3-202ENST00000540159 RRAGDQ9NQL2 400 aaPredicted RBP16.95■□□□□ 0.3
BNIP3-202ENST00000540159 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
BNIP3-202ENST00000540159 CDK12Q9NYV4 1490 aaPredicted RBP16.94■□□□□ 0.3
BNIP3-202ENST00000540159 PKP1Q13835 747 aa16.93■□□□□ 0.3
BNIP3-202ENST00000540159 TPRNQ4KMQ1 711 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms