RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
TSPAN9-207ENST00000539631 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
TSPAN9-207ENST00000539631 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 ABCC6O95255 1503 aa17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 TRPC5Q9UL62 973 aaPredicted RBP17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
TSPAN9-207ENST00000539631 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
TSPAN9-207ENST00000539631 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
TSPAN9-207ENST00000539631 CNGB1Q14028 1251 aaPredicted RBP17.37■□□□□ 0.37
TSPAN9-207ENST00000539631 MORC1Q86VD1 984 aa17.37■□□□□ 0.37
TSPAN9-207ENST00000539631 GLI3P10071 1580 aa17.36■□□□□ 0.37
TSPAN9-207ENST00000539631 EVA1CP58658 441 aa17.36■□□□□ 0.37
TSPAN9-207ENST00000539631 VPS72Q15906 364 aa17.36■□□□□ 0.37
TSPAN9-207ENST00000539631 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
TSPAN9-207ENST00000539631 AMPHP49418 695 aa17.34■□□□□ 0.37
TSPAN9-207ENST00000539631 IP6K1Q92551 441 aa17.34■□□□□ 0.37
TSPAN9-207ENST00000539631 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
TSPAN9-207ENST00000539631 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
TSPAN9-207ENST00000539631 EMILIN1Q9Y6C2 1016 aa17.34■□□□□ 0.37
TSPAN9-207ENST00000539631 RXRBP28702 533 aa17.33■□□□□ 0.36
TSPAN9-207ENST00000539631 HOXC9P31274 260 aa17.33■□□□□ 0.36
TSPAN9-207ENST00000539631 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
TSPAN9-207ENST00000539631 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.36
TSPAN9-207ENST00000539631 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.36
TSPAN9-207ENST00000539631 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
TSPAN9-207ENST00000539631 RTL1A6NKG5 1358 aa17.32■□□□□ 0.36
TSPAN9-207ENST00000539631 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
TSPAN9-207ENST00000539631 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
TSPAN9-207ENST00000539631 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
TSPAN9-207ENST00000539631 FAM208AQ9UK61 1670 aaKnown RBP17.3■□□□□ 0.36
TSPAN9-207ENST00000539631 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
TSPAN9-207ENST00000539631 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
TSPAN9-207ENST00000539631 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
TSPAN9-207ENST00000539631 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
TSPAN9-207ENST00000539631 CRB1P82279 1406 aa17.3■□□□□ 0.36
TSPAN9-207ENST00000539631 FLT4P35916 1363 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 ERBB3P21860 1342 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 CSB-PGBD3P0DP91 1061 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 HSP90AB2PQ58FF8 381 aa17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 SMG6Q86US8 1419 aaKnown RBP17.29■□□□□ 0.36
TSPAN9-207ENST00000539631 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
TSPAN9-207ENST00000539631 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
TSPAN9-207ENST00000539631 INSRP06213 1382 aa17.28■□□□□ 0.36
TSPAN9-207ENST00000539631 BRWD3Q6RI45 1802 aa17.27■□□□□ 0.36
TSPAN9-207ENST00000539631 RGS12O14924 1447 aa17.27■□□□□ 0.35
TSPAN9-207ENST00000539631 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
TSPAN9-207ENST00000539631 FAM98CQ17RN3 349 aaKnown RBP17.26■□□□□ 0.35
TSPAN9-207ENST00000539631 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
TSPAN9-207ENST00000539631 MTHFSP49914 203 aa17.24■□□□□ 0.35
TSPAN9-207ENST00000539631 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
TSPAN9-207ENST00000539631 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
TSPAN9-207ENST00000539631 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
TSPAN9-207ENST00000539631 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
TSPAN9-207ENST00000539631 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
TSPAN9-207ENST00000539631 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
TSPAN9-207ENST00000539631 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
TSPAN9-207ENST00000539631 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
TSPAN9-207ENST00000539631 A0A0G2JS52 829 aa17.21■□□□□ 0.35
TSPAN9-207ENST00000539631 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
TSPAN9-207ENST00000539631 MYT1Q01538 1121 aa17.21■□□□□ 0.35
TSPAN9-207ENST00000539631 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
TSPAN9-207ENST00000539631 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
TSPAN9-207ENST00000539631 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
TSPAN9-207ENST00000539631 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
TSPAN9-207ENST00000539631 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
TSPAN9-207ENST00000539631 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
TSPAN9-207ENST00000539631 DISP2A7MBM2 1401 aa17.18■□□□□ 0.34
TSPAN9-207ENST00000539631 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
TSPAN9-207ENST00000539631 RALBP1Q15311 655 aa17.17■□□□□ 0.34
TSPAN9-207ENST00000539631 EYA1Q99502 592 aa17.17■□□□□ 0.34
TSPAN9-207ENST00000539631 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
TSPAN9-207ENST00000539631 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
TSPAN9-207ENST00000539631 IL2RBP14784 551 aa17.15■□□□□ 0.34
TSPAN9-207ENST00000539631 IL13P35225 146 aa17.15■□□□□ 0.34
TSPAN9-207ENST00000539631 CDCA7Q9BWT1 371 aaPredicted RBP17.14■□□□□ 0.33
TSPAN9-207ENST00000539631 PRKRIP1Q9H875 184 aaPredicted RBP17.14■□□□□ 0.33
TSPAN9-207ENST00000539631 MEGF6O75095 1541 aa17.14■□□□□ 0.33
TSPAN9-207ENST00000539631 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
TSPAN9-207ENST00000539631 KRT27Q7Z3Y8 459 aa17.13■□□□□ 0.33
TSPAN9-207ENST00000539631 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
TSPAN9-207ENST00000539631 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
TSPAN9-207ENST00000539631 DDB1Q16531 1140 aa17.12■□□□□ 0.33
TSPAN9-207ENST00000539631 CFAP53Q96M91 514 aa17.12■□□□□ 0.33
TSPAN9-207ENST00000539631 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
TSPAN9-207ENST00000539631 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
TSPAN9-207ENST00000539631 EXOC5O00471 708 aa17.1■□□□□ 0.33
TSPAN9-207ENST00000539631 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
TSPAN9-207ENST00000539631 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
TSPAN9-207ENST00000539631 RAPGEF4Q8WZA2 1011 aa17.1■□□□□ 0.33
TSPAN9-207ENST00000539631 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
TSPAN9-207ENST00000539631 TATP17735 454 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-207ENST00000539631 AEBP1Q8IUX7 1158 aa17.09■□□□□ 0.33
TSPAN9-207ENST00000539631 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
TSPAN9-207ENST00000539631 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms