RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 MARF1Q9Y4F3 1742 aaKnown RBP8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 LRRC7Q96NW7 1537 aa8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 TRAK2O60296 914 aa8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 TRAIPQ9BWF2 469 aa8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 TMEM94Q12767 1356 aa8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 KTN1Q86UP2 1357 aaKnown RBP8.13□□□□□ -1.11
PDZRN4-203ENST00000539469 CAPN15O75808 1086 aa8.12□□□□□ -1.11
PDZRN4-203ENST00000539469 ANKARQ7Z5J8 1434 aa8.12□□□□□ -1.11
PDZRN4-203ENST00000539469 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
PDZRN4-203ENST00000539469 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
PDZRN4-203ENST00000539469 PIK3C2AO00443 1686 aa8.12□□□□□ -1.11
PDZRN4-203ENST00000539469 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 PROSER2Q86WR7 435 aaPredicted RBP8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 HNRNPUQ00839 825 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 NPC1L1Q9UHC9 1359 aa8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 AK7Q96M32 723 aa8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 CCDC61Q9Y6R9 512 aa8.11□□□□□ -1.11
PDZRN4-203ENST00000539469 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
PDZRN4-203ENST00000539469 FAM177A1Q8N128 213 aaPredicted RBP8.1□□□□□ -1.11
PDZRN4-203ENST00000539469 TRPM3Q9HCF6 1732 aaPredicted RBP8.1□□□□□ -1.11
PDZRN4-203ENST00000539469 LTBP4Q8N2S1 1624 aa8.1□□□□□ -1.11
PDZRN4-203ENST00000539469 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
PDZRN4-203ENST00000539469 ACEP12821 1306 aa8.1□□□□□ -1.11
PDZRN4-203ENST00000539469 SHPRHQ149N8 1683 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 USP6P35125 1406 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 MST1RQ04912 1400 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 EDC4Q6P2E9 1401 aaKnown RBP8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 PDE4DQ08499 809 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 PMFBP1Q8TBY8 1022 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 USP54Q70EL1 1684 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 MYBBP1AQ9BQG0 1328 aaKnown RBP8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 POLR3AO14802 1390 aaPredicted RBP8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 SSH2Q76I76 1423 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 B4GALNT3Q6L9W6 998 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 TERF2IPQ9NYB0 399 aa8.09□□□□□ -1.11
PDZRN4-203ENST00000539469 MAP2P11137 1827 aaKnown RBP8.09□□□□□ -1.12
PDZRN4-203ENST00000539469 C1orf167Q5SNV9 1468 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 RALBP1Q15311 655 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 HDGFL2Q7Z4V5 671 aaPredicted RBP8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 ZFP91Q96JP5 570 aaPredicted RBP8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 DCCP43146 1447 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 NCOA3Q9Y6Q9 1424 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 SENP3-EIF4A1A0A087X0R7 540 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 PAK3O75914 559 aaPredicted RBP8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 FANCIQ9NVI1 1328 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 ZRANB1Q9UGI0 708 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 CGNL1Q0VF96 1302 aa8.08□□□□□ -1.12
PDZRN4-203ENST00000539469 FYB1O15117 783 aa8.07□□□□□ -1.12
PDZRN4-203ENST00000539469 GGNBP2Q9H3C7 697 aa8.07□□□□□ -1.12
PDZRN4-203ENST00000539469 ABCB7O75027 752 aa8.07□□□□□ -1.12
PDZRN4-203ENST00000539469 PPP2R1AP30153 589 aa8.07□□□□□ -1.12
PDZRN4-203ENST00000539469 NSD2O96028 1365 aa8.07□□□□□ -1.12
PDZRN4-203ENST00000539469 NME9Q86XW9 330 aa8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 ORAI2Q96SN7 254 aa8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 C19orf44Q9H6X5 657 aa8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 MRS2Q9HD23 443 aa8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 ALS2Q96Q42 1657 aa8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 PEAK1Q9H792 1746 aa8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 BRD4O60885 1362 aaPredicted RBP8.06□□□□□ -1.12
PDZRN4-203ENST00000539469 TNNT2P45379 298 aaPredicted RBP8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 ZNF692Q9BU19 519 aaPredicted RBP8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 OVOS2A0A0J9YW53 1432 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 OVOS2Q6IE36 1432 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 MSH6P52701 1360 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 TRIM66O15016 1216 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 PPM1GO15355 546 aaPredicted RBP8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 CRYBG1Q9Y4K1 1723 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 ESCO1Q5FWF5 840 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 PHF8Q9UPP1 1060 aa8.05□□□□□ -1.12
PDZRN4-203ENST00000539469 LTN1O94822 1766 aa8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 NHSL1Q5SYE7 1610 aa8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 ONECUT3O60422 494 aaPredicted RBP8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 MORC1Q86VD1 984 aa8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 FBLN1P23142 703 aa8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 FLIIQ13045 1269 aa8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 NGDNQ8NEJ9 315 aaKnown RBP8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 COL3A1P02461 1466 aaPredicted RBP8.04□□□□□ -1.12
PDZRN4-203ENST00000539469 CCDC97Q96F63 343 aaPredicted RBP8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 ATF3P18847 181 aa8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 BRD2P25440 801 aaKnown RBP8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 DDX17Q92841 729 aaKnown RBP8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 ROBO1Q9Y6N7 1651 aa8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 PXDNQ92626 1479 aa8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 PHRF1Q9P1Y6 1649 aaKnown RBP8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 XPCQ01831 940 aaPredicted RBP8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 FAM9BQ8IZU0 186 aa8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 NOP58Q9Y2X3 529 aaKnown RBP8.03□□□□□ -1.12
PDZRN4-203ENST00000539469 E2F4Q16254 413 aa8.02□□□□□ -1.13
PDZRN4-203ENST00000539469 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.13
PDZRN4-203ENST00000539469 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms