RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 RGPD1P0DJD0 1748 aa15.26■□□□□ 0.03
FAM60A-206ENST00000539409 KIAA0232Q92628 1395 aa15.26■□□□□ 0.03
FAM60A-206ENST00000539409 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
FAM60A-206ENST00000539409 IL13P35225 146 aa15.26■□□□□ 0.03
FAM60A-206ENST00000539409 IP6K1Q92551 441 aa15.26■□□□□ 0.03
FAM60A-206ENST00000539409 ZBTB7CA1YPR0 619 aa15.25■□□□□ 0.03
FAM60A-206ENST00000539409 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
FAM60A-206ENST00000539409 YTHDC1Q96MU7 727 aaKnown RBP15.25■□□□□ 0.03
FAM60A-206ENST00000539409 RGPD5Q99666 1765 aa15.25■□□□□ 0.03
FAM60A-206ENST00000539409 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
FAM60A-206ENST00000539409 LMO7Q8WWI1 1683 aa15.24■□□□□ 0.03
FAM60A-206ENST00000539409 HAP1P54257 671 aaPredicted RBP15.24■□□□□ 0.03
FAM60A-206ENST00000539409 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
FAM60A-206ENST00000539409 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
FAM60A-206ENST00000539409 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
FAM60A-206ENST00000539409 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
FAM60A-206ENST00000539409 JCADQ9P266 1359 aa15.22■□□□□ 0.03
FAM60A-206ENST00000539409 HSPA1LP34931 641 aa15.22■□□□□ 0.03
FAM60A-206ENST00000539409 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
FAM60A-206ENST00000539409 PRDM11Q9NQV5 511 aa15.21■□□□□ 0.03
FAM60A-206ENST00000539409 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
FAM60A-206ENST00000539409 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
FAM60A-206ENST00000539409 COL14A1Q05707 1796 aaKnown RBP15.2■□□□□ 0.02
FAM60A-206ENST00000539409 LTV1Q96GA3 475 aaPredicted RBP15.19■□□□□ 0.02
FAM60A-206ENST00000539409 ERBB3P21860 1342 aa15.19■□□□□ 0.02
FAM60A-206ENST00000539409 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
FAM60A-206ENST00000539409 HNRNPUQ00839 825 aaKnown RBP eCLIP15.19■□□□□ 0.02
FAM60A-206ENST00000539409 FAM208AQ9UK61 1670 aaKnown RBP15.19■□□□□ 0.02
FAM60A-206ENST00000539409 CCDC146Q8IYE0 955 aa15.18■□□□□ 0.02
FAM60A-206ENST00000539409 ANKRD24Q8TF21 1146 aa15.18■□□□□ 0.02
FAM60A-206ENST00000539409 EYA1Q99502 592 aa15.18■□□□□ 0.02
FAM60A-206ENST00000539409 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
FAM60A-206ENST00000539409 KDRP35968 1356 aa15.18■□□□□ 0.02
FAM60A-206ENST00000539409 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
FAM60A-206ENST00000539409 HMOX1P09601 288 aa15.17■□□□□ 0.02
FAM60A-206ENST00000539409 COL5A2P05997 1499 aaPredicted RBP15.17■□□□□ 0.02
FAM60A-206ENST00000539409 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
FAM60A-206ENST00000539409 FCHSD2O94868 740 aa15.16■□□□□ 0.02
FAM60A-206ENST00000539409 PLEKHF1Q96S99 279 aa15.16■□□□□ 0.02
FAM60A-206ENST00000539409 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
FAM60A-206ENST00000539409 NCAPD2Q15021 1401 aa15.16■□□□□ 0.02
FAM60A-206ENST00000539409 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
FAM60A-206ENST00000539409 NUTM2BA6NNL0 878 aaPredicted RBP15.15■□□□□ 0.02
FAM60A-206ENST00000539409 NUTM2EB1AL46 878 aaPredicted RBP15.15■□□□□ 0.02
FAM60A-206ENST00000539409 NUTM2AQ8IVF1 878 aaPredicted RBP15.15■□□□□ 0.02
FAM60A-206ENST00000539409 RUNDC1Q96C34 613 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 LRP6O75581 1613 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 SPATA31A6Q5VVP1 1343 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 NBPF6Q5VWK0 638 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 NBPF4Q96M43 638 aa15.15■□□□□ 0.02
FAM60A-206ENST00000539409 ADAMTS2O95450 1211 aa15.14■□□□□ 0.01
FAM60A-206ENST00000539409 APAF1O14727 1248 aa15.13■□□□□ 0.01
FAM60A-206ENST00000539409 USHBP1Q8N6Y0 703 aa15.13■□□□□ 0.01
FAM60A-206ENST00000539409 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
FAM60A-206ENST00000539409 NRAPQ86VF7 1730 aa15.13■□□□□ 0.01
FAM60A-206ENST00000539409 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
FAM60A-206ENST00000539409 WDR17Q8IZU2 1322 aa15.12■□□□□ 0.01
FAM60A-206ENST00000539409 NWD2Q9ULI1 1742 aa15.12■□□□□ 0.01
FAM60A-206ENST00000539409 BTG4Q9NY30 223 aa15.12■□□□□ 0.01
FAM60A-206ENST00000539409 MAPK8IP3Q9UPT6 1336 aa15.12■□□□□ 0.01
FAM60A-206ENST00000539409 TCP11L2Q8N4U5 519 aa15.11■□□□□ 0.01
FAM60A-206ENST00000539409 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
FAM60A-206ENST00000539409 PHACTR3Q96KR7 559 aa15.11■□□□□ 0.01
FAM60A-206ENST00000539409 SLIT2O94813 1529 aa15.11■□□□□ 0.01
FAM60A-206ENST00000539409 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
FAM60A-206ENST00000539409 STRN4Q9NRL3 753 aa15.09■□□□□ 0.01
FAM60A-206ENST00000539409 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
FAM60A-206ENST00000539409 LARP1Q6PKG0 1096 aaKnown RBP15.08■□□□□ 0.01
FAM60A-206ENST00000539409 FBXO41Q8TF61 875 aa15.08■□□□□ 0.01
FAM60A-206ENST00000539409 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0.01
FAM60A-206ENST00000539409 NEFMP07197 916 aa15.08■□□□□ 0
FAM60A-206ENST00000539409 CRB1P82279 1406 aa15.08■□□□□ 0
FAM60A-206ENST00000539409 TMPOP42166 694 aaKnown RBP15.07■□□□□ 0
FAM60A-206ENST00000539409 EVA1CP58658 441 aa15.07■□□□□ 0
FAM60A-206ENST00000539409 TOM1L2Q6ZVM7 507 aa15.07■□□□□ 0
FAM60A-206ENST00000539409 DLG5Q8TDM6 1919 aa15.07■□□□□ 0
FAM60A-206ENST00000539409 MEGF6O75095 1541 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 NGEFQ8N5V2 710 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 C8orf37Q96NL8 207 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 ZNF521Q96K83 1311 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 NEUROD2Q15784 382 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 NFE2L2Q16236 605 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 CARD10Q9BWT7 1032 aa15.06■□□□□ 0
FAM60A-206ENST00000539409 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ 0
FAM60A-206ENST00000539409 PARP4Q9UKK3 1724 aaKnown RBP15.05■□□□□ -0
FAM60A-206ENST00000539409 BCL9LQ86UU0 1499 aa15.05■□□□□ -0
FAM60A-206ENST00000539409 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.04■□□□□ -0
FAM60A-206ENST00000539409 CCDC27Q2M243 656 aa15.04■□□□□ -0
FAM60A-206ENST00000539409 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
FAM60A-206ENST00000539409 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
FAM60A-206ENST00000539409 NGLY1Q96IV0 654 aa15.04■□□□□ -0
FAM60A-206ENST00000539409 PKD1L3Q7Z443 1732 aa15.04■□□□□ -0
FAM60A-206ENST00000539409 PLEKHG2Q9H7P9 1386 aa15.03■□□□□ -0
FAM60A-206ENST00000539409 RIPK4P57078 832 aa15.03■□□□□ -0
FAM60A-206ENST00000539409 WNK3Q9BYP7 1800 aa15.03■□□□□ -0
FAM60A-206ENST00000539409 WWC1Q8IX03 1113 aa15.03■□□□□ -0
FAM60A-206ENST00000539409 RAPGEF4Q8WZA2 1011 aa15.03■□□□□ -0
FAM60A-206ENST00000539409 TRIM35Q9UPQ4 493 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms