RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 KIF20BQ96Q89 1820 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 LTN1O94822 1766 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 RGPD5Q99666 1765 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 C11orf95C9JLR9 678 aaPredicted RBP12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 EVA1CP58658 441 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
LRTOMT-216ENST00000539271 FYB1O15117 783 aa12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 COG3Q96JB2 828 aa12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
LRTOMT-216ENST00000539271 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
LRTOMT-216ENST00000539271 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
LRTOMT-216ENST00000539271 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
LRTOMT-216ENST00000539271 CRB1P82279 1406 aa12.43□□□□□ -0.42
LRTOMT-216ENST00000539271 EP400Q96L91 3159 aa12.42□□□□□ -0.42
LRTOMT-216ENST00000539271 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
LRTOMT-216ENST00000539271 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
LRTOMT-216ENST00000539271 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
LRTOMT-216ENST00000539271 TCP11L2Q8N4U5 519 aa12.41□□□□□ -0.42
LRTOMT-216ENST00000539271 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
LRTOMT-216ENST00000539271 A0A0G2JS52 829 aa12.4□□□□□ -0.42
LRTOMT-216ENST00000539271 MYT1Q01538 1121 aa12.4□□□□□ -0.42
LRTOMT-216ENST00000539271 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
LRTOMT-216ENST00000539271 PANK3Q9H999 370 aa12.4□□□□□ -0.42
LRTOMT-216ENST00000539271 THRAP3Q9Y2W1 955 aaKnown RBP12.4□□□□□ -0.42
LRTOMT-216ENST00000539271 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
LRTOMT-216ENST00000539271 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
LRTOMT-216ENST00000539271 FBLN1P23142 703 aa12.39□□□□□ -0.43
LRTOMT-216ENST00000539271 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
LRTOMT-216ENST00000539271 IP6K1Q92551 441 aa12.39□□□□□ -0.43
LRTOMT-216ENST00000539271 ERBB3P21860 1342 aa12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 BLMP54132 1417 aaPredicted RBP12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 CARD10Q9BWT7 1032 aa12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
LRTOMT-216ENST00000539271 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
LRTOMT-216ENST00000539271 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
LRTOMT-216ENST00000539271 HOXC9P31274 260 aa12.36□□□□□ -0.43
LRTOMT-216ENST00000539271 AMPHP49418 695 aa12.36□□□□□ -0.43
LRTOMT-216ENST00000539271 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
LRTOMT-216ENST00000539271 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
LRTOMT-216ENST00000539271 WASHC2AQ641Q2 1341 aa12.36□□□□□ -0.43
LRTOMT-216ENST00000539271 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
LRTOMT-216ENST00000539271 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
LRTOMT-216ENST00000539271 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
LRTOMT-216ENST00000539271 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
LRTOMT-216ENST00000539271 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 NSD2O96028 1365 aa12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 KIF24Q5T7B8 1368 aa12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 KCNA4P22459 653 aa12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 NLRP2Q9NX02 1062 aa12.34□□□□□ -0.43
LRTOMT-216ENST00000539271 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
LRTOMT-216ENST00000539271 FAM182BQ5T319 152 aa12.33□□□□□ -0.44
LRTOMT-216ENST00000539271 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
LRTOMT-216ENST00000539271 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
LRTOMT-216ENST00000539271 INSRP06213 1382 aa12.32□□□□□ -0.44
LRTOMT-216ENST00000539271 FLT4P35916 1363 aa12.32□□□□□ -0.44
LRTOMT-216ENST00000539271 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
LRTOMT-216ENST00000539271 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
LRTOMT-216ENST00000539271 EMILIN1Q9Y6C2 1016 aa12.32□□□□□ -0.44
LRTOMT-216ENST00000539271 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
LRTOMT-216ENST00000539271 DDB1Q16531 1140 aa12.31□□□□□ -0.44
LRTOMT-216ENST00000539271 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
LRTOMT-216ENST00000539271 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
LRTOMT-216ENST00000539271 POLKQ9UBT6 870 aa12.3□□□□□ -0.44
LRTOMT-216ENST00000539271 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
LRTOMT-216ENST00000539271 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
LRTOMT-216ENST00000539271 IL2RBP14784 551 aa12.29□□□□□ -0.44
LRTOMT-216ENST00000539271 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
LRTOMT-216ENST00000539271 MORC1Q86VD1 984 aa12.29□□□□□ -0.44
LRTOMT-216ENST00000539271 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 TNS1Q9HBL0 1735 aaKnown RBP12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 EXOC5O00471 708 aa12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 NBPF6Q5VWK0 638 aa12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 NBPF4Q96M43 638 aa12.28□□□□□ -0.44
LRTOMT-216ENST00000539271 SBF2Q86WG5 1849 aa12.27□□□□□ -0.44
LRTOMT-216ENST00000539271 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
LRTOMT-216ENST00000539271 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
LRTOMT-216ENST00000539271 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
LRTOMT-216ENST00000539271 BCL9O00512 1426 aa12.27□□□□□ -0.45
LRTOMT-216ENST00000539271 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
LRTOMT-216ENST00000539271 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
LRTOMT-216ENST00000539271 TRIM37O94972 964 aa12.25□□□□□ -0.45
LRTOMT-216ENST00000539271 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
LRTOMT-216ENST00000539271 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
LRTOMT-216ENST00000539271 MEGF6O75095 1541 aa12.25□□□□□ -0.45
LRTOMT-216ENST00000539271 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
LRTOMT-216ENST00000539271 ZEB1P37275 1124 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms