RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 GCP02774 474 aa20.47■□□□□ 0.87
VAMP1-207ENST00000539047 COL16A1Q07092 1604 aaPredicted RBP20.46■□□□□ 0.87
VAMP1-207ENST00000539047 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
VAMP1-207ENST00000539047 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
VAMP1-207ENST00000539047 FBLN1P23142 703 aa20.46■□□□□ 0.87
VAMP1-207ENST00000539047 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
VAMP1-207ENST00000539047 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
VAMP1-207ENST00000539047 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
VAMP1-207ENST00000539047 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.87
VAMP1-207ENST00000539047 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
VAMP1-207ENST00000539047 NEFMP07197 916 aa20.45■□□□□ 0.86
VAMP1-207ENST00000539047 FAM208AQ9UK61 1670 aaKnown RBP20.43■□□□□ 0.86
VAMP1-207ENST00000539047 RGPD1P0DJD0 1748 aa20.42■□□□□ 0.86
VAMP1-207ENST00000539047 HOXC9P31274 260 aa20.42■□□□□ 0.86
VAMP1-207ENST00000539047 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
VAMP1-207ENST00000539047 ZBED9Q6R2W3 1325 aa20.4■□□□□ 0.86
VAMP1-207ENST00000539047 IP6K1Q92551 441 aa20.4■□□□□ 0.86
VAMP1-207ENST00000539047 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
VAMP1-207ENST00000539047 CPDO75976 1380 aa20.39■□□□□ 0.85
VAMP1-207ENST00000539047 IL13P35225 146 aa20.39■□□□□ 0.85
VAMP1-207ENST00000539047 EIF4A2Q14240 407 aaKnown RBP20.39■□□□□ 0.85
VAMP1-207ENST00000539047 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
VAMP1-207ENST00000539047 ARHGEF25Q86VW2 580 aa20.39■□□□□ 0.85
VAMP1-207ENST00000539047 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
VAMP1-207ENST00000539047 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
VAMP1-207ENST00000539047 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
VAMP1-207ENST00000539047 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
VAMP1-207ENST00000539047 FCHSD2O94868 740 aa20.36■□□□□ 0.85
VAMP1-207ENST00000539047 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
VAMP1-207ENST00000539047 COL18A1P39060 1754 aa20.36■□□□□ 0.85
VAMP1-207ENST00000539047 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
VAMP1-207ENST00000539047 COL14A1Q05707 1796 aaKnown RBP20.34■□□□□ 0.85
VAMP1-207ENST00000539047 PRDM11Q9NQV5 511 aa20.34■□□□□ 0.85
VAMP1-207ENST00000539047 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
VAMP1-207ENST00000539047 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
VAMP1-207ENST00000539047 RGPD2P0DJD1 1756 aa20.33■□□□□ 0.84
VAMP1-207ENST00000539047 CAMTA1Q9Y6Y1 1673 aa20.32■□□□□ 0.84
VAMP1-207ENST00000539047 LMO7Q8WWI1 1683 aa20.32■□□□□ 0.84
VAMP1-207ENST00000539047 HMOX1P09601 288 aa20.31■□□□□ 0.84
VAMP1-207ENST00000539047 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
VAMP1-207ENST00000539047 IGSF1Q8N6C5 1336 aa20.3■□□□□ 0.84
VAMP1-207ENST00000539047 APAF1O14727 1248 aa20.3■□□□□ 0.84
VAMP1-207ENST00000539047 RSPH6AQ9H0K4 717 aa20.3■□□□□ 0.84
VAMP1-207ENST00000539047 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
VAMP1-207ENST00000539047 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
VAMP1-207ENST00000539047 CSB-PGBD3P0DP91 1061 aa20.28■□□□□ 0.84
VAMP1-207ENST00000539047 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
VAMP1-207ENST00000539047 JCADQ9P266 1359 aa20.28■□□□□ 0.84
VAMP1-207ENST00000539047 PLCH1Q4KWH8 1693 aa20.27■□□□□ 0.84
VAMP1-207ENST00000539047 KDRP35968 1356 aa20.27■□□□□ 0.84
VAMP1-207ENST00000539047 PDE3BQ13370 1112 aa20.27■□□□□ 0.84
VAMP1-207ENST00000539047 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
VAMP1-207ENST00000539047 ERBB3P21860 1342 aa20.27■□□□□ 0.83
VAMP1-207ENST00000539047 DLG5Q8TDM6 1919 aa20.26■□□□□ 0.83
VAMP1-207ENST00000539047 CHRNA2Q15822 529 aa20.26■□□□□ 0.83
VAMP1-207ENST00000539047 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
VAMP1-207ENST00000539047 PLEKHF1Q96S99 279 aa20.26■□□□□ 0.83
VAMP1-207ENST00000539047 EYA1Q99502 592 aa20.26■□□□□ 0.83
VAMP1-207ENST00000539047 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
VAMP1-207ENST00000539047 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
VAMP1-207ENST00000539047 SENP3-EIF4A1A0A087X0R7 540 aa20.23■□□□□ 0.83
VAMP1-207ENST00000539047 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
VAMP1-207ENST00000539047 COL5A2P05997 1499 aaPredicted RBP20.23■□□□□ 0.83
VAMP1-207ENST00000539047 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
VAMP1-207ENST00000539047 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
VAMP1-207ENST00000539047 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
VAMP1-207ENST00000539047 AXIN2Q9Y2T1 843 aa20.22■□□□□ 0.83
VAMP1-207ENST00000539047 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
VAMP1-207ENST00000539047 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
VAMP1-207ENST00000539047 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
VAMP1-207ENST00000539047 CCDC27Q2M243 656 aa20.21■□□□□ 0.83
VAMP1-207ENST00000539047 NLRP2Q9NX02 1062 aa20.21■□□□□ 0.83
VAMP1-207ENST00000539047 SPATA31A6Q5VVP1 1343 aa20.21■□□□□ 0.83
VAMP1-207ENST00000539047 EVA1CP58658 441 aa20.2■□□□□ 0.82
VAMP1-207ENST00000539047 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
VAMP1-207ENST00000539047 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
VAMP1-207ENST00000539047 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
VAMP1-207ENST00000539047 RIPK4P57078 832 aa20.19■□□□□ 0.82
VAMP1-207ENST00000539047 NBPF6Q5VWK0 638 aa20.19■□□□□ 0.82
VAMP1-207ENST00000539047 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
VAMP1-207ENST00000539047 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
VAMP1-207ENST00000539047 NBPF4Q96M43 638 aa20.19■□□□□ 0.82
VAMP1-207ENST00000539047 WDR17Q8IZU2 1322 aa20.19■□□□□ 0.82
VAMP1-207ENST00000539047 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
VAMP1-207ENST00000539047 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
VAMP1-207ENST00000539047 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
VAMP1-207ENST00000539047 USHBP1Q8N6Y0 703 aa20.18■□□□□ 0.82
VAMP1-207ENST00000539047 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
VAMP1-207ENST00000539047 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
VAMP1-207ENST00000539047 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
VAMP1-207ENST00000539047 FAM83GA6ND36 823 aa20.16■□□□□ 0.82
VAMP1-207ENST00000539047 ADAMTS2O95450 1211 aa20.16■□□□□ 0.82
VAMP1-207ENST00000539047 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
VAMP1-207ENST00000539047 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
VAMP1-207ENST00000539047 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
VAMP1-207ENST00000539047 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
VAMP1-207ENST00000539047 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
VAMP1-207ENST00000539047 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
VAMP1-207ENST00000539047 ZNF521Q96K83 1311 aa20.15■□□□□ 0.82
VAMP1-207ENST00000539047 LRP6O75581 1613 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms