RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 WDR17Q8IZU2 1322 aa17.13■□□□□ 0.33
CLTCL1-205ENST00000538828 C11orf95C9JLR9 678 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-205ENST00000538828 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
CLTCL1-205ENST00000538828 COG3Q96JB2 828 aa17.11■□□□□ 0.33
CLTCL1-205ENST00000538828 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
CLTCL1-205ENST00000538828 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
CLTCL1-205ENST00000538828 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
CLTCL1-205ENST00000538828 MYOM1P52179 1685 aa17.1■□□□□ 0.33
CLTCL1-205ENST00000538828 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
CLTCL1-205ENST00000538828 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
CLTCL1-205ENST00000538828 FYB1O15117 783 aa17.08■□□□□ 0.32
CLTCL1-205ENST00000538828 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
CLTCL1-205ENST00000538828 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
CLTCL1-205ENST00000538828 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
CLTCL1-205ENST00000538828 A0A0G2JS52 829 aa17.07■□□□□ 0.32
CLTCL1-205ENST00000538828 MYT1Q01538 1121 aa17.07■□□□□ 0.32
CLTCL1-205ENST00000538828 LTN1O94822 1766 aa17.07■□□□□ 0.32
CLTCL1-205ENST00000538828 KIF24Q5T7B8 1368 aa17.06■□□□□ 0.32
CLTCL1-205ENST00000538828 ERBB3P21860 1342 aa17.06■□□□□ 0.32
CLTCL1-205ENST00000538828 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
CLTCL1-205ENST00000538828 IP6K1Q92551 441 aa17.06■□□□□ 0.32
CLTCL1-205ENST00000538828 RGPD5Q99666 1765 aa17.05■□□□□ 0.32
CLTCL1-205ENST00000538828 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
CLTCL1-205ENST00000538828 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
CLTCL1-205ENST00000538828 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
CLTCL1-205ENST00000538828 USP35Q9P2H5 1018 aa17.04■□□□□ 0.32
CLTCL1-205ENST00000538828 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 CGNL1Q0VF96 1302 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 SOX12O15370 315 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 BCL9O00512 1426 aa17.03■□□□□ 0.32
CLTCL1-205ENST00000538828 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.31
CLTCL1-205ENST00000538828 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
CLTCL1-205ENST00000538828 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
CLTCL1-205ENST00000538828 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
CLTCL1-205ENST00000538828 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
CLTCL1-205ENST00000538828 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
CLTCL1-205ENST00000538828 HOXC9P31274 260 aa16.99■□□□□ 0.31
CLTCL1-205ENST00000538828 BAG6P46379 1132 aa16.99■□□□□ 0.31
CLTCL1-205ENST00000538828 DDB1Q16531 1140 aa16.99■□□□□ 0.31
CLTCL1-205ENST00000538828 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
CLTCL1-205ENST00000538828 NSD2O96028 1365 aa16.99■□□□□ 0.31
CLTCL1-205ENST00000538828 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
CLTCL1-205ENST00000538828 LRRC37A3O60309 1634 aa16.97■□□□□ 0.31
CLTCL1-205ENST00000538828 AMPHP49418 695 aa16.97■□□□□ 0.31
CLTCL1-205ENST00000538828 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.31
CLTCL1-205ENST00000538828 PEAK1Q9H792 1746 aa16.96■□□□□ 0.3
CLTCL1-205ENST00000538828 INSRP06213 1382 aa16.95■□□□□ 0.3
CLTCL1-205ENST00000538828 FLT4P35916 1363 aa16.95■□□□□ 0.3
CLTCL1-205ENST00000538828 EXOC5O00471 708 aa16.95■□□□□ 0.3
CLTCL1-205ENST00000538828 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
CLTCL1-205ENST00000538828 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
CLTCL1-205ENST00000538828 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
CLTCL1-205ENST00000538828 IL2RBP14784 551 aa16.94■□□□□ 0.3
CLTCL1-205ENST00000538828 PANK3Q9H999 370 aa16.94■□□□□ 0.3
CLTCL1-205ENST00000538828 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
CLTCL1-205ENST00000538828 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
CLTCL1-205ENST00000538828 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
CLTCL1-205ENST00000538828 RRS1Q15050 365 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-205ENST00000538828 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
CLTCL1-205ENST00000538828 DEFB132Q7Z7B7 95 aa16.91■□□□□ 0.3
CLTCL1-205ENST00000538828 POLR3GLQ9BT43 218 aa16.91■□□□□ 0.3
CLTCL1-205ENST00000538828 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
CLTCL1-205ENST00000538828 TRIM37O94972 964 aa16.9■□□□□ 0.3
CLTCL1-205ENST00000538828 FBLN1P23142 703 aa16.9■□□□□ 0.3
CLTCL1-205ENST00000538828 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
CLTCL1-205ENST00000538828 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
CLTCL1-205ENST00000538828 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
CLTCL1-205ENST00000538828 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.29
CLTCL1-205ENST00000538828 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
CLTCL1-205ENST00000538828 RGPD3A6NKT7 1758 aaPredicted RBP16.89■□□□□ 0.29
CLTCL1-205ENST00000538828 RGPD4Q7Z3J3 1758 aa16.89■□□□□ 0.29
CLTCL1-205ENST00000538828 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.29
CLTCL1-205ENST00000538828 PLSCR1O15162 318 aa16.88■□□□□ 0.29
CLTCL1-205ENST00000538828 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
CLTCL1-205ENST00000538828 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
CLTCL1-205ENST00000538828 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
CLTCL1-205ENST00000538828 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
CLTCL1-205ENST00000538828 APBA3O96018 575 aa16.86■□□□□ 0.29
CLTCL1-205ENST00000538828 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
CLTCL1-205ENST00000538828 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
CLTCL1-205ENST00000538828 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
CLTCL1-205ENST00000538828 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
CLTCL1-205ENST00000538828 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
CLTCL1-205ENST00000538828 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
CLTCL1-205ENST00000538828 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
CLTCL1-205ENST00000538828 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
CLTCL1-205ENST00000538828 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
CLTCL1-205ENST00000538828 RREB1Q92766 1687 aa16.82■□□□□ 0.28
CLTCL1-205ENST00000538828 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
CLTCL1-205ENST00000538828 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
CLTCL1-205ENST00000538828 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
CLTCL1-205ENST00000538828 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
CLTCL1-205ENST00000538828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
CLTCL1-205ENST00000538828 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
CLTCL1-205ENST00000538828 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms