RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SMG6Q86US8 1419 aaKnown RBP18.99■□□□□ 0.63
CD4-208ENST00000538827 SOS2Q07890 1332 aaPredicted RBP18.99■□□□□ 0.63
CD4-208ENST00000538827 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
CD4-208ENST00000538827 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
CD4-208ENST00000538827 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
CD4-208ENST00000538827 SPATA31A3Q5VYP0 1347 aa18.98■□□□□ 0.63
CD4-208ENST00000538827 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
CD4-208ENST00000538827 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
CD4-208ENST00000538827 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
CD4-208ENST00000538827 BLMP54132 1417 aaPredicted RBP18.96■□□□□ 0.63
CD4-208ENST00000538827 USP19O94966 1318 aa18.96■□□□□ 0.63
CD4-208ENST00000538827 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
CD4-208ENST00000538827 LRP5O75197 1615 aa18.96■□□□□ 0.63
CD4-208ENST00000538827 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
CD4-208ENST00000538827 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
CD4-208ENST00000538827 SF3B2Q13435 895 aaKnown RBP18.92■□□□□ 0.62
CD4-208ENST00000538827 KCNH5Q8NCM2 988 aa18.92■□□□□ 0.62
CD4-208ENST00000538827 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
CD4-208ENST00000538827 MAP3K19Q56UN5 1328 aa18.92■□□□□ 0.62
CD4-208ENST00000538827 AMPHP49418 695 aa18.91■□□□□ 0.62
CD4-208ENST00000538827 COL22A1Q8NFW1 1626 aaPredicted RBP18.91■□□□□ 0.62
CD4-208ENST00000538827 HAP1P54257 671 aaPredicted RBP18.9■□□□□ 0.62
CD4-208ENST00000538827 CABLES1Q8TDN4 633 aa18.9■□□□□ 0.62
CD4-208ENST00000538827 PNISRQ8TF01 805 aaKnown RBP18.9■□□□□ 0.62
CD4-208ENST00000538827 FLT4P35916 1363 aa18.9■□□□□ 0.62
CD4-208ENST00000538827 RTL1A6NKG5 1358 aa18.89■□□□□ 0.61
CD4-208ENST00000538827 GCP02774 474 aa18.88■□□□□ 0.61
CD4-208ENST00000538827 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
CD4-208ENST00000538827 DIAPH1O60610 1272 aaKnown RBP18.87■□□□□ 0.61
CD4-208ENST00000538827 DEFB132Q7Z7B7 95 aa18.87■□□□□ 0.61
CD4-208ENST00000538827 RGPD5Q99666 1765 aa18.87■□□□□ 0.61
CD4-208ENST00000538827 U2SURPO15042 1029 aaKnown RBP18.86■□□□□ 0.61
CD4-208ENST00000538827 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
CD4-208ENST00000538827 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
CD4-208ENST00000538827 INSRP06213 1382 aa18.84■□□□□ 0.61
CD4-208ENST00000538827 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
CD4-208ENST00000538827 HOXC9P31274 260 aa18.84■□□□□ 0.61
CD4-208ENST00000538827 HSP90AB2PQ58FF8 381 aa18.83■□□□□ 0.6
CD4-208ENST00000538827 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
CD4-208ENST00000538827 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
CD4-208ENST00000538827 LTV1Q96GA3 475 aaPredicted RBP18.82■□□□□ 0.6
CD4-208ENST00000538827 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
CD4-208ENST00000538827 ABCC6O95255 1503 aa18.82■□□□□ 0.6
CD4-208ENST00000538827 COL18A1P39060 1754 aa18.82■□□□□ 0.6
CD4-208ENST00000538827 RGPD1P0DJD0 1748 aa18.82■□□□□ 0.6
CD4-208ENST00000538827 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
CD4-208ENST00000538827 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
CD4-208ENST00000538827 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
CD4-208ENST00000538827 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
CD4-208ENST00000538827 ARHGEF25Q86VW2 580 aa18.81■□□□□ 0.6
CD4-208ENST00000538827 UNC5CLQ8IV45 518 aa18.8■□□□□ 0.6
CD4-208ENST00000538827 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
CD4-208ENST00000538827 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
CD4-208ENST00000538827 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
CD4-208ENST00000538827 IL13P35225 146 aa18.79■□□□□ 0.6
CD4-208ENST00000538827 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
CD4-208ENST00000538827 IP6K1Q92551 441 aa18.79■□□□□ 0.6
CD4-208ENST00000538827 CPDO75976 1380 aa18.79■□□□□ 0.6
CD4-208ENST00000538827 PRDM11Q9NQV5 511 aa18.78■□□□□ 0.6
CD4-208ENST00000538827 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
CD4-208ENST00000538827 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
CD4-208ENST00000538827 PLCH1Q4KWH8 1693 aa18.77■□□□□ 0.6
CD4-208ENST00000538827 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
CD4-208ENST00000538827 BAG6P46379 1132 aa18.77■□□□□ 0.6
CD4-208ENST00000538827 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.75■□□□□ 0.59
CD4-208ENST00000538827 HMOX1P09601 288 aa18.75■□□□□ 0.59
CD4-208ENST00000538827 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
CD4-208ENST00000538827 CAMTA1Q9Y6Y1 1673 aa18.75■□□□□ 0.59
CD4-208ENST00000538827 YY1P25490 414 aa18.74■□□□□ 0.59
CD4-208ENST00000538827 ANKRD24Q8TF21 1146 aa18.74■□□□□ 0.59
CD4-208ENST00000538827 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
CD4-208ENST00000538827 GLI3P10071 1580 aa18.72■□□□□ 0.59
CD4-208ENST00000538827 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
CD4-208ENST00000538827 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
CD4-208ENST00000538827 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
CD4-208ENST00000538827 SLIT2O94813 1529 aa18.72■□□□□ 0.59
CD4-208ENST00000538827 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 SULT6B1Q6IMI4 303 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 AEBP1Q8IUX7 1158 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
CD4-208ENST00000538827 ERBB3P21860 1342 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
CD4-208ENST00000538827 NEFMP07197 916 aa18.7■□□□□ 0.58
CD4-208ENST00000538827 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
CD4-208ENST00000538827 EYA1Q99502 592 aa18.7■□□□□ 0.58
CD4-208ENST00000538827 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
CD4-208ENST00000538827 VPS72Q15906 364 aa18.69■□□□□ 0.58
CD4-208ENST00000538827 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
CD4-208ENST00000538827 COL5A2P05997 1499 aaPredicted RBP18.69■□□□□ 0.58
CD4-208ENST00000538827 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
CD4-208ENST00000538827 NRAPQ86VF7 1730 aa18.69■□□□□ 0.58
CD4-208ENST00000538827 APAF1O14727 1248 aa18.67■□□□□ 0.58
CD4-208ENST00000538827 FCHSD2O94868 740 aa18.67■□□□□ 0.58
CD4-208ENST00000538827 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
CD4-208ENST00000538827 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
CD4-208ENST00000538827 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
CD4-208ENST00000538827 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
CD4-208ENST00000538827 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms