RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 OVOS2Q6IE36 1432 aa12.31□□□□□ -0.44
DDB1-212ENST00000538470 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
DDB1-212ENST00000538470 FAM182BQ5T319 152 aa12.31□□□□□ -0.44
DDB1-212ENST00000538470 CARD11Q9BXL7 1154 aa12.31□□□□□ -0.44
DDB1-212ENST00000538470 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
DDB1-212ENST00000538470 CD163L1Q9NR16 1453 aa12.3□□□□□ -0.44
DDB1-212ENST00000538470 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
DDB1-212ENST00000538470 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
DDB1-212ENST00000538470 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
DDB1-212ENST00000538470 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
DDB1-212ENST00000538470 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
DDB1-212ENST00000538470 TRIM37O94972 964 aa12.28□□□□□ -0.44
DDB1-212ENST00000538470 ARHGEF25Q86VW2 580 aa12.28□□□□□ -0.44
DDB1-212ENST00000538470 NINLQ9Y2I6 1382 aa12.28□□□□□ -0.44
DDB1-212ENST00000538470 BCL9O00512 1426 aa12.28□□□□□ -0.44
DDB1-212ENST00000538470 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
DDB1-212ENST00000538470 PUS7Q96PZ0 661 aaKnown RBP12.27□□□□□ -0.45
DDB1-212ENST00000538470 CAMKK2Q96RR4 588 aa12.27□□□□□ -0.45
DDB1-212ENST00000538470 CDCA7Q9BWT1 371 aaPredicted RBP12.27□□□□□ -0.45
DDB1-212ENST00000538470 EZH2Q15910 746 aaKnown RBP12.26□□□□□ -0.45
DDB1-212ENST00000538470 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
DDB1-212ENST00000538470 CCDC7Q96M83 1385 aa12.26□□□□□ -0.45
DDB1-212ENST00000538470 TNS2Q63HR2 1409 aa12.26□□□□□ -0.45
DDB1-212ENST00000538470 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
DDB1-212ENST00000538470 APBA3O96018 575 aa12.25□□□□□ -0.45
DDB1-212ENST00000538470 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
DDB1-212ENST00000538470 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
DDB1-212ENST00000538470 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
DDB1-212ENST00000538470 DDB1Q16531 1140 aa12.24□□□□□ -0.45
DDB1-212ENST00000538470 NHSQ6T4R5 1651 aa12.24□□□□□ -0.45
DDB1-212ENST00000538470 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
DDB1-212ENST00000538470 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
DDB1-212ENST00000538470 R3HDM1Q15032 1099 aaKnown RBP12.23□□□□□ -0.45
DDB1-212ENST00000538470 TERF2IPQ9NYB0 399 aa12.23□□□□□ -0.45
DDB1-212ENST00000538470 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
DDB1-212ENST00000538470 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
DDB1-212ENST00000538470 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.45
DDB1-212ENST00000538470 ERBB3P21860 1342 aa12.21□□□□□ -0.45
DDB1-212ENST00000538470 SOX12O15370 315 aa12.21□□□□□ -0.45
DDB1-212ENST00000538470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.45
DDB1-212ENST00000538470 TMC1Q8TDI8 760 aa12.21□□□□□ -0.45
DDB1-212ENST00000538470 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
DDB1-212ENST00000538470 NME9Q86XW9 330 aa12.2□□□□□ -0.46
DDB1-212ENST00000538470 CASZ1Q86V15 1759 aa12.2□□□□□ -0.46
DDB1-212ENST00000538470 PLSCR1O15162 318 aa12.19□□□□□ -0.46
DDB1-212ENST00000538470 TESK2Q96S53 571 aa12.19□□□□□ -0.46
DDB1-212ENST00000538470 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
DDB1-212ENST00000538470 SLC12A5Q9H2X9 1139 aa12.19□□□□□ -0.46
DDB1-212ENST00000538470 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
DDB1-212ENST00000538470 BTAF1O14981 1849 aa12.18□□□□□ -0.46
DDB1-212ENST00000538470 USP47Q96K76 1375 aa12.18□□□□□ -0.46
DDB1-212ENST00000538470 MYOM1P52179 1685 aa12.17□□□□□ -0.46
DDB1-212ENST00000538470 ST20-MTHFSA0A0A6YYL1 179 aa12.17□□□□□ -0.46
DDB1-212ENST00000538470 MARCH10Q8NA82 808 aaPredicted RBP12.17□□□□□ -0.46
DDB1-212ENST00000538470 EXOC5O00471 708 aa12.16□□□□□ -0.46
DDB1-212ENST00000538470 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
DDB1-212ENST00000538470 PAPPAQ13219 1627 aa12.15□□□□□ -0.46
DDB1-212ENST00000538470 SHANK3Q9BYB0 1731 aa12.15□□□□□ -0.46
DDB1-212ENST00000538470 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
DDB1-212ENST00000538470 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
DDB1-212ENST00000538470 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 IL2RBP14784 551 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 TMF1P82094 1093 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 COG3Q96JB2 828 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
DDB1-212ENST00000538470 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
DDB1-212ENST00000538470 IP6K1Q92551 441 aa12.13□□□□□ -0.47
DDB1-212ENST00000538470 ANKRD26Q9UPS8 1709 aa12.12□□□□□ -0.47
DDB1-212ENST00000538470 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
DDB1-212ENST00000538470 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
DDB1-212ENST00000538470 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
DDB1-212ENST00000538470 ANO8Q9HCE9 1232 aaPredicted RBP12.11□□□□□ -0.47
DDB1-212ENST00000538470 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
DDB1-212ENST00000538470 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
DDB1-212ENST00000538470 KIF24Q5T7B8 1368 aa12.1□□□□□ -0.47
DDB1-212ENST00000538470 KCNQ2O43526 872 aa12.1□□□□□ -0.47
DDB1-212ENST00000538470 HOXC9P31274 260 aa12.1□□□□□ -0.47
DDB1-212ENST00000538470 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
DDB1-212ENST00000538470 LY75O60449 1722 aa12.1□□□□□ -0.47
DDB1-212ENST00000538470 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
DDB1-212ENST00000538470 PROM2Q8N271 834 aa12.08□□□□□ -0.48
DDB1-212ENST00000538470 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
DDB1-212ENST00000538470 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
DDB1-212ENST00000538470 MEGF6O75095 1541 aa12.07□□□□□ -0.48
DDB1-212ENST00000538470 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
DDB1-212ENST00000538470 AMPHP49418 695 aa12.07□□□□□ -0.48
DDB1-212ENST00000538470 PKD1L3Q7Z443 1732 aa12.07□□□□□ -0.48
DDB1-212ENST00000538470 FLT4P35916 1363 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 NSD3Q9BZ95 1437 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 FYB1O15117 783 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 ACSBG1Q96GR2 724 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
DDB1-212ENST00000538470 INSRP06213 1382 aa12.05□□□□□ -0.48
DDB1-212ENST00000538470 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
DDB1-212ENST00000538470 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
DDB1-212ENST00000538470 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms