RNA–Protein interactions for RNA: ENST00000538413.5

LRTOMT-214, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2

Gene LRTOMT, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-214ENST00000538413 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
LRTOMT-214ENST00000538413 USP6P35125 1406 aa20.27■□□□□ 0.83
LRTOMT-214ENST00000538413 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.83
LRTOMT-214ENST00000538413 PROM2Q8N271 834 aa20.26■□□□□ 0.83
LRTOMT-214ENST00000538413 PDGFDQ9GZP0 370 aaPredicted RBP20.26■□□□□ 0.83
LRTOMT-214ENST00000538413 STK32BQ9NY57 414 aa20.25■□□□□ 0.83
LRTOMT-214ENST00000538413 SLIT3O75094 1523 aa20.25■□□□□ 0.83
LRTOMT-214ENST00000538413 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
LRTOMT-214ENST00000538413 BCL9O00512 1426 aa20.24■□□□□ 0.83
LRTOMT-214ENST00000538413 SBF2Q86WG5 1849 aa20.23■□□□□ 0.83
LRTOMT-214ENST00000538413 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
LRTOMT-214ENST00000538413 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
LRTOMT-214ENST00000538413 CASZ1Q86V15 1759 aa20.23■□□□□ 0.83
LRTOMT-214ENST00000538413 PTGER2P43116 358 aa20.22■□□□□ 0.83
LRTOMT-214ENST00000538413 TXNRD1Q16881 649 aa20.22■□□□□ 0.83
LRTOMT-214ENST00000538413 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
LRTOMT-214ENST00000538413 CARD10Q9BWT7 1032 aa20.21■□□□□ 0.83
LRTOMT-214ENST00000538413 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
LRTOMT-214ENST00000538413 EXOC5O00471 708 aa20.2■□□□□ 0.82
LRTOMT-214ENST00000538413 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
LRTOMT-214ENST00000538413 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
LRTOMT-214ENST00000538413 ZNF784Q8NCA9 323 aaPredicted RBP20.19■□□□□ 0.82
LRTOMT-214ENST00000538413 SOX12O15370 315 aa20.18■□□□□ 0.82
LRTOMT-214ENST00000538413 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
LRTOMT-214ENST00000538413 FHDC1Q9C0D6 1143 aaPredicted RBP20.18■□□□□ 0.82
LRTOMT-214ENST00000538413 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
LRTOMT-214ENST00000538413 COL18A1P39060 1754 aa20.18■□□□□ 0.82
LRTOMT-214ENST00000538413 MYOM1P52179 1685 aa20.17■□□□□ 0.82
LRTOMT-214ENST00000538413 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
LRTOMT-214ENST00000538413 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
LRTOMT-214ENST00000538413 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
LRTOMT-214ENST00000538413 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
LRTOMT-214ENST00000538413 QRICH2Q9H0J4 1663 aa20.16■□□□□ 0.82
LRTOMT-214ENST00000538413 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
LRTOMT-214ENST00000538413 AKAP12Q02952 1782 aa20.15■□□□□ 0.82
LRTOMT-214ENST00000538413 WNK3Q9BYP7 1800 aa20.15■□□□□ 0.82
LRTOMT-214ENST00000538413 TTC21AQ8NDW8 1320 aa20.13■□□□□ 0.81
LRTOMT-214ENST00000538413 TNS2Q63HR2 1409 aa20.11■□□□□ 0.81
LRTOMT-214ENST00000538413 ARXQ96QS3 562 aa20.11■□□□□ 0.81
LRTOMT-214ENST00000538413 SGIP1Q9BQI5 828 aa20.11■□□□□ 0.81
LRTOMT-214ENST00000538413 ACSBG1Q96GR2 724 aa20.1■□□□□ 0.81
LRTOMT-214ENST00000538413 NFAT5O94916 1531 aa20.07■□□□□ 0.8
LRTOMT-214ENST00000538413 TRPM1Q7Z4N2 1603 aa20.07■□□□□ 0.8
LRTOMT-214ENST00000538413 SENP3-EIF4A1A0A087X0R7 540 aa20.07■□□□□ 0.8
LRTOMT-214ENST00000538413 NLRP2Q9NX02 1062 aa20.07■□□□□ 0.8
LRTOMT-214ENST00000538413 RGPD5Q99666 1765 aa20.07■□□□□ 0.8
LRTOMT-214ENST00000538413 KTN1Q86UP2 1357 aaKnown RBP20.07■□□□□ 0.8
LRTOMT-214ENST00000538413 ABCC6O95255 1503 aa20.06■□□□□ 0.8
LRTOMT-214ENST00000538413 MAP3K5Q99683 1374 aa20.06■□□□□ 0.8
LRTOMT-214ENST00000538413 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
LRTOMT-214ENST00000538413 NHSQ6T4R5 1651 aa20.04■□□□□ 0.8
LRTOMT-214ENST00000538413 IL2RBP14784 551 aa20.04■□□□□ 0.8
LRTOMT-214ENST00000538413 L3MBTL2Q969R5 705 aa20.04■□□□□ 0.8
LRTOMT-214ENST00000538413 ERBB3P21860 1342 aa20.03■□□□□ 0.8
LRTOMT-214ENST00000538413 GPR162Q16538 588 aa20.03■□□□□ 0.8
LRTOMT-214ENST00000538413 ZNF827Q17R98 1081 aa20.02■□□□□ 0.8
LRTOMT-214ENST00000538413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.02■□□□□ 0.8
LRTOMT-214ENST00000538413 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
LRTOMT-214ENST00000538413 CHD4Q14839 1912 aa20.01■□□□□ 0.79
LRTOMT-214ENST00000538413 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
LRTOMT-214ENST00000538413 USP31Q70CQ4 1352 aa20■□□□□ 0.79
LRTOMT-214ENST00000538413 LRRC4BQ9NT99 713 aa20■□□□□ 0.79
LRTOMT-214ENST00000538413 PAPPAQ13219 1627 aa20■□□□□ 0.79
LRTOMT-214ENST00000538413 POLD1P28340 1107 aa19.99■□□□□ 0.79
LRTOMT-214ENST00000538413 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
LRTOMT-214ENST00000538413 ANKRD24Q8TF21 1146 aa19.99■□□□□ 0.79
LRTOMT-214ENST00000538413 SLC16A10Q8TF71 515 aa19.99■□□□□ 0.79
LRTOMT-214ENST00000538413 NME9Q86XW9 330 aa19.98■□□□□ 0.79
LRTOMT-214ENST00000538413 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
LRTOMT-214ENST00000538413 AKT1S1Q96B36 256 aa19.97■□□□□ 0.79
LRTOMT-214ENST00000538413 PELP1Q8IZL8 1130 aaKnown RBP19.96■□□□□ 0.79
LRTOMT-214ENST00000538413 BTAF1O14981 1849 aa19.96■□□□□ 0.79
LRTOMT-214ENST00000538413 KAT6BQ8WYB5 2073 aa19.95■□□□□ 0.78
LRTOMT-214ENST00000538413 GIGYF1O75420 1035 aaPredicted RBP19.95■□□□□ 0.78
LRTOMT-214ENST00000538413 HDGFL2Q7Z4V5 671 aaPredicted RBP19.94■□□□□ 0.78
LRTOMT-214ENST00000538413 DDX54Q8TDD1 881 aaKnown RBP19.94■□□□□ 0.78
LRTOMT-214ENST00000538413 TMC1Q8TDI8 760 aa19.94■□□□□ 0.78
LRTOMT-214ENST00000538413 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
LRTOMT-214ENST00000538413 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
LRTOMT-214ENST00000538413 MON2Q7Z3U7 1717 aa19.93■□□□□ 0.78
LRTOMT-214ENST00000538413 CEP350Q5VT06 3117 aa19.92■□□□□ 0.78
LRTOMT-214ENST00000538413 PNPLA7Q6ZV29 1317 aa19.92■□□□□ 0.78
LRTOMT-214ENST00000538413 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
LRTOMT-214ENST00000538413 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
LRTOMT-214ENST00000538413 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
LRTOMT-214ENST00000538413 USP54Q70EL1 1684 aa19.9■□□□□ 0.78
LRTOMT-214ENST00000538413 LTN1O94822 1766 aa19.89■□□□□ 0.77
LRTOMT-214ENST00000538413 IP6K1Q92551 441 aa19.89■□□□□ 0.77
LRTOMT-214ENST00000538413 LTV1Q96GA3 475 aaPredicted RBP19.89■□□□□ 0.77
LRTOMT-214ENST00000538413 CD163L1Q9NR16 1453 aa19.89■□□□□ 0.77
LRTOMT-214ENST00000538413 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
LRTOMT-214ENST00000538413 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
LRTOMT-214ENST00000538413 KCNQ4P56696 695 aa19.88■□□□□ 0.77
LRTOMT-214ENST00000538413 NLGN2Q8NFZ4 835 aa19.88■□□□□ 0.77
LRTOMT-214ENST00000538413 SLC12A5Q9H2X9 1139 aa19.88■□□□□ 0.77
LRTOMT-214ENST00000538413 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
LRTOMT-214ENST00000538413 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
LRTOMT-214ENST00000538413 GRIN3BO60391 1043 aa19.86■□□□□ 0.77
LRTOMT-214ENST00000538413 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
LRTOMT-214ENST00000538413 MSH5O43196 834 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms