RNA–Protein interactions for RNA: ENST00000538195.1

PDCD2-206, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-206ENST00000538195 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
PDCD2-206ENST00000538195 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
PDCD2-206ENST00000538195 PDE4CQ08493 712 aa12.1□□□□□ -0.47
PDCD2-206ENST00000538195 ERFEQ4G0M1 354 aa12.1□□□□□ -0.47
PDCD2-206ENST00000538195 C4orf48Q5BLP8 95 aa12.1□□□□□ -0.47
PDCD2-206ENST00000538195 KANK4Q5T7N3 995 aaPredicted RBP12.1□□□□□ -0.47
PDCD2-206ENST00000538195 PHTF2Q8N3S3 785 aa12.1□□□□□ -0.47
PDCD2-206ENST00000538195 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
PDCD2-206ENST00000538195 ATG7O95352 703 aa12.09□□□□□ -0.47
PDCD2-206ENST00000538195 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
PDCD2-206ENST00000538195 GGCXP38435 758 aa12.08□□□□□ -0.48
PDCD2-206ENST00000538195 SH3BP2P78314 561 aa12.08□□□□□ -0.48
PDCD2-206ENST00000538195 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
PDCD2-206ENST00000538195 PLPP7Q8NBV4 271 aa12.08□□□□□ -0.48
PDCD2-206ENST00000538195 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
PDCD2-206ENST00000538195 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
PDCD2-206ENST00000538195 SLC10A4Q96EP9 437 aa12.07□□□□□ -0.48
PDCD2-206ENST00000538195 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
PDCD2-206ENST00000538195 CARNS1A5YM72 827 aa12.06□□□□□ -0.48
PDCD2-206ENST00000538195 NCOA4Q13772 614 aa12.06□□□□□ -0.48
PDCD2-206ENST00000538195 KCTD17Q8N5Z5 321 aa12.06□□□□□ -0.48
PDCD2-206ENST00000538195 USTQ9Y2C2 406 aa12.06□□□□□ -0.48
PDCD2-206ENST00000538195 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
PDCD2-206ENST00000538195 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
PDCD2-206ENST00000538195 TRIM32Q13049 653 aa12.04□□□□□ -0.48
PDCD2-206ENST00000538195 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
PDCD2-206ENST00000538195 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
PDCD2-206ENST00000538195 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
PDCD2-206ENST00000538195 C1QTNF2Q9BXJ5 285 aa12.03□□□□□ -0.48
PDCD2-206ENST00000538195 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.03□□□□□ -0.48
PDCD2-206ENST00000538195 CHIC2Q9UKJ5 165 aa12.03□□□□□ -0.48
PDCD2-206ENST00000538195 EML3Q32P44 896 aa12.02□□□□□ -0.49
PDCD2-206ENST00000538195 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
PDCD2-206ENST00000538195 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
PDCD2-206ENST00000538195 LZTS3O60299 673 aaPredicted RBP12.01□□□□□ -0.49
PDCD2-206ENST00000538195 DOLKQ9UPQ8 538 aa12.01□□□□□ -0.49
PDCD2-206ENST00000538195 ATP5J2-PTCD1G3V325 749 aa12□□□□□ -0.49
PDCD2-206ENST00000538195 RASA1P20936 1047 aa12□□□□□ -0.49
PDCD2-206ENST00000538195 SKOR1P84550 965 aa12□□□□□ -0.49
PDCD2-206ENST00000538195 NBPF20Q3BBV1 942 aa12□□□□□ -0.49
PDCD2-206ENST00000538195 TMEM88BA6NKF7 163 aa11.99□□□□□ -0.49
PDCD2-206ENST00000538195 ELOAQ14241 798 aaKnown RBP11.99□□□□□ -0.49
PDCD2-206ENST00000538195 CRTC2Q53ET0 693 aaPredicted RBP11.99□□□□□ -0.49
PDCD2-206ENST00000538195 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
PDCD2-206ENST00000538195 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
PDCD2-206ENST00000538195 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
PDCD2-206ENST00000538195 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
PDCD2-206ENST00000538195 ZMIZ1Q9ULJ6 1067 aa11.99□□□□□ -0.49
PDCD2-206ENST00000538195 NOVA2Q9UNW9 492 aaKnown RBP11.99□□□□□ -0.49
PDCD2-206ENST00000538195 FAM196BA6NMK8 535 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L21D6R901 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 WNT7BP56706 349 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
PDCD2-206ENST00000538195 CDV3Q9UKY7 258 aaKnown RBP11.98□□□□□ -0.49
PDCD2-206ENST00000538195 VARSP26640 1264 aaKnown RBP11.97□□□□□ -0.49
PDCD2-206ENST00000538195 RPIAP49247 311 aa11.97□□□□□ -0.49
PDCD2-206ENST00000538195 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
PDCD2-206ENST00000538195 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
PDCD2-206ENST00000538195 ESPNB1AK53 854 aa11.96□□□□□ -0.49
PDCD2-206ENST00000538195 RAB15P59190 212 aa11.96□□□□□ -0.49
PDCD2-206ENST00000538195 PTK7Q13308 1070 aa11.96□□□□□ -0.49
PDCD2-206ENST00000538195 TMEM164Q5U3C3 297 aa11.96□□□□□ -0.49
PDCD2-206ENST00000538195 OGFOD1Q8N543 542 aa11.95□□□□□ -0.5
PDCD2-206ENST00000538195 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
PDCD2-206ENST00000538195 KCTD15Q96SI1 283 aaPredicted RBP11.95□□□□□ -0.5
PDCD2-206ENST00000538195 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
PDCD2-206ENST00000538195 PCDHB11Q9Y5F2 797 aa11.95□□□□□ -0.5
PDCD2-206ENST00000538195 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
PDCD2-206ENST00000538195 BRD1O95696 1058 aa11.94□□□□□ -0.5
PDCD2-206ENST00000538195 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
PDCD2-206ENST00000538195 TRIM50Q86XT4 487 aa11.94□□□□□ -0.5
PDCD2-206ENST00000538195 CLDN10P78369 228 aa11.93□□□□□ -0.5
PDCD2-206ENST00000538195 ARID5BQ14865 1188 aa11.93□□□□□ -0.5
PDCD2-206ENST00000538195 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
PDCD2-206ENST00000538195 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
PDCD2-206ENST00000538195 ATP1A2P50993 1020 aa11.92□□□□□ -0.5
PDCD2-206ENST00000538195 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
PDCD2-206ENST00000538195 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
PDCD2-206ENST00000538195 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
PDCD2-206ENST00000538195 DNAAF2Q9NVR5 837 aaKnown RBP11.92□□□□□ -0.5
PDCD2-206ENST00000538195 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
PDCD2-206ENST00000538195 GTF2IP78347 998 aa11.9□□□□□ -0.5
PDCD2-206ENST00000538195 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
PDCD2-206ENST00000538195 MAP4K5Q9Y4K4 846 aa11.9□□□□□ -0.5
PDCD2-206ENST00000538195 DPYDQ12882 1025 aa11.89□□□□□ -0.51
PDCD2-206ENST00000538195 USP4Q13107 963 aa11.89□□□□□ -0.51
PDCD2-206ENST00000538195 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
PDCD2-206ENST00000538195 CCDC125Q86Z20 511 aa11.89□□□□□ -0.51
PDCD2-206ENST00000538195 EMID1Q96A84 441 aaPredicted RBP11.89□□□□□ -0.51
PDCD2-206ENST00000538195 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms