RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	MYOM1	P52179	1685 aa		32.15	■■■□□ 2.74
CHFR-215	ENST00000537551	FYB1	O15117	783 aa		32.15	■■■□□ 2.74
CHFR-215	ENST00000537551	CARD14	Q9BXL6	1004 aa		32.15	■■■□□ 2.74
CHFR-215	ENST00000537551	GGNBP2	Q9H3C7	697 aa		32.15	■■■□□ 2.74
CHFR-215	ENST00000537551	TOM1L2	Q6ZVM7	507 aa		32.14	■■■□□ 2.74
CHFR-215	ENST00000537551	KRT27	Q7Z3Y8	459 aa		32.14	■■■□□ 2.74
CHFR-215	ENST00000537551	CSB-PGBD3	P0DP91	1061 aa		32.13	■■■□□ 2.73
CHFR-215	ENST00000537551	COL18A1	P39060	1754 aa		32.13	■■■□□ 2.73
CHFR-215	ENST00000537551	TCP11L2	Q8N4U5	519 aa		32.13	■■■□□ 2.73
CHFR-215	ENST00000537551	NSD3	Q9BZ95	1437 aa		32.11	■■■□□ 2.73
CHFR-215	ENST00000537551	C11orf95	C9JLR9	678 aa	Predicted RBP	32.11	■■■□□ 2.73
CHFR-215	ENST00000537551	CRB1	P82279	1406 aa		32.1	■■■□□ 2.73
CHFR-215	ENST00000537551	BRWD3	Q6RI45	1802 aa		32.1	■■■□□ 2.73
CHFR-215	ENST00000537551	BARGIN	Q6ZT62	677 aa		32.1	■■■□□ 2.73
CHFR-215	ENST00000537551	WDR17	Q8IZU2	1322 aa		32.09	■■■□□ 2.73
CHFR-215	ENST00000537551	THRAP3	Q9Y2W1	955 aa	Known RBP	32.09	■■■□□ 2.73
CHFR-215	ENST00000537551	FBLN1	P23142	703 aa		32.06	■■■□□ 2.72
CHFR-215	ENST00000537551	RGPD5	Q99666	1765 aa		32.05	■■■□□ 2.72
CHFR-215	ENST00000537551	PANK3	Q9H999	370 aa		32.05	■■■□□ 2.72
CHFR-215	ENST00000537551	ABCC6	O95255	1503 aa		32.04	■■■□□ 2.72
CHFR-215	ENST00000537551	LTN1	O94822	1766 aa		32.04	■■■□□ 2.72
CHFR-215	ENST00000537551	AMPH	P49418	695 aa		32.03	■■■□□ 2.72
CHFR-215	ENST00000537551	CGNL1	Q0VF96	1302 aa		32.02	■■■□□ 2.72
CHFR-215	ENST00000537551	THSD7A	Q9UPZ6	1657 aa		32.02	■■■□□ 2.72
CHFR-215	ENST00000537551	IP6K1	Q92551	441 aa		32.02	■■■□□ 2.72
CHFR-215	ENST00000537551	MAP3K19	Q56UN5	1328 aa		32.01	■■■□□ 2.72
CHFR-215	ENST00000537551	KIF20B	Q96Q89	1820 aa		32	■■■□□ 2.71
CHFR-215	ENST00000537551	PDE3B	Q13370	1112 aa		32	■■■□□ 2.71
CHFR-215	ENST00000537551	ANKRD24	Q8TF21	1146 aa		32	■■■□□ 2.71
CHFR-215	ENST00000537551	CARD10	Q9BWT7	1032 aa		32	■■■□□ 2.71
CHFR-215	ENST00000537551	KIF7	Q2M1P5	1343 aa		32	■■■□□ 2.71
CHFR-215	ENST00000537551	RRS1	Q15050	365 aa	Known RBP	31.99	■■■□□ 2.71
CHFR-215	ENST00000537551	FAM182B	Q5T319	152 aa		31.99	■■■□□ 2.71
CHFR-215	ENST00000537551	CCDC125	Q86Z20	511 aa		31.99	■■■□□ 2.71
CHFR-215	ENST00000537551	NLRP2	Q9NX02	1062 aa		31.98	■■■□□ 2.71
CHFR-215	ENST00000537551	ERBB3	P21860	1342 aa		31.98	■■■□□ 2.71
CHFR-215	ENST00000537551	LTV1	Q96GA3	475 aa	Predicted RBP	31.97	■■■□□ 2.71
CHFR-215	ENST00000537551	BLM	P54132	1417 aa	Predicted RBP	31.95	■■■□□ 2.71
CHFR-215	ENST00000537551	HOXC9	P31274	260 aa		31.95	■■■□□ 2.71
CHFR-215	ENST00000537551	SF3B2	Q13435	895 aa	Known RBP	31.94	■■■□□ 2.7
CHFR-215	ENST00000537551	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.93	■■■□□ 2.7
CHFR-215	ENST00000537551	CCDC7	Q96M83	1385 aa		31.93	■■■□□ 2.7
CHFR-215	ENST00000537551	DDB1	Q16531	1140 aa		31.91	■■■□□ 2.7
CHFR-215	ENST00000537551	FAM196A	Q6ZSG2	479 aa		31.9	■■■□□ 2.7
CHFR-215	ENST00000537551	KNSTRN	Q9Y448	316 aa		31.9	■■■□□ 2.7
CHFR-215	ENST00000537551	RTL1	A6NKG5	1358 aa		31.88	■■■□□ 2.69
CHFR-215	ENST00000537551	EP400	Q96L91	3159 aa		31.86	■■■□□ 2.69
CHFR-215	ENST00000537551	PARP4	Q9UKK3	1724 aa	Known RBP	31.86	■■■□□ 2.69
CHFR-215	ENST00000537551	PPM1G	O15355	546 aa	Predicted RBP	31.85	■■■□□ 2.69
CHFR-215	ENST00000537551	TNNT2	P45379	298 aa	Predicted RBP	31.85	■■■□□ 2.69
CHFR-215	ENST00000537551	EXOC5	O00471	708 aa		31.84	■■■□□ 2.69
CHFR-215	ENST00000537551	EMILIN1	Q9Y6C2	1016 aa		31.84	■■■□□ 2.69
CHFR-215	ENST00000537551	FLT4	P35916	1363 aa		31.82	■■■□□ 2.69
CHFR-215	ENST00000537551	WASHC2A	Q641Q2	1341 aa		31.82	■■■□□ 2.68
CHFR-215	ENST00000537551	IL2RB	P14784	551 aa		31.82	■■■□□ 2.68
CHFR-215	ENST00000537551	HSP90AB2P	Q58FF8	381 aa		31.82	■■■□□ 2.68
CHFR-215	ENST00000537551	DISP2	A7MBM2	1401 aa		31.81	■■■□□ 2.68
CHFR-215	ENST00000537551	NSD2	O96028	1365 aa		31.81	■■■□□ 2.68
CHFR-215	ENST00000537551	KIF24	Q5T7B8	1368 aa		31.81	■■■□□ 2.68
CHFR-215	ENST00000537551	DEFB132	Q7Z7B7	95 aa		31.8	■■■□□ 2.68
CHFR-215	ENST00000537551	TRIM37	O94972	964 aa		31.79	■■■□□ 2.68
CHFR-215	ENST00000537551	SMG6	Q86US8	1419 aa	Known RBP	31.79	■■■□□ 2.68
CHFR-215	ENST00000537551	MORC1	Q86VD1	984 aa		31.79	■■■□□ 2.68
CHFR-215	ENST00000537551	WNK3	Q9BYP7	1800 aa		31.79	■■■□□ 2.68
CHFR-215	ENST00000537551	INSR	P06213	1382 aa		31.79	■■■□□ 2.68
CHFR-215	ENST00000537551	LRRC37A3	O60309	1634 aa		31.78	■■■□□ 2.68
CHFR-215	ENST00000537551	BAG6	P46379	1132 aa		31.77	■■■□□ 2.68
CHFR-215	ENST00000537551	ANKRD26	Q9UPS8	1709 aa		31.76	■■■□□ 2.67
CHFR-215	ENST00000537551	POLK	Q9UBT6	870 aa		31.76	■■■□□ 2.67
CHFR-215	ENST00000537551	FAM208A	Q9UK61	1670 aa	Known RBP	31.76	■■■□□ 2.67
CHFR-215	ENST00000537551	PEAK1	Q9H792	1746 aa		31.75	■■■□□ 2.67
CHFR-215	ENST00000537551	MARCH10	Q8NA82	808 aa	Predicted RBP	31.75	■■■□□ 2.67
CHFR-215	ENST00000537551	OVOS2	A0A0G2JMS6	1433 aa		31.75	■■■□□ 2.67
CHFR-215	ENST00000537551	NBPF6	Q5VWK0	638 aa		31.74	■■■□□ 2.67
CHFR-215	ENST00000537551	NBPF4	Q96M43	638 aa		31.74	■■■□□ 2.67
CHFR-215	ENST00000537551	MAP2	P11137	1827 aa	Known RBP	31.73	■■■□□ 2.67
CHFR-215	ENST00000537551	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.72	■■■□□ 2.67
CHFR-215	ENST00000537551	RGPD1	P0DJD0	1748 aa		31.72	■■■□□ 2.67
CHFR-215	ENST00000537551	PER1	O15534	1290 aa	Predicted RBP	31.71	■■■□□ 2.67
CHFR-215	ENST00000537551	USHBP1	Q8N6Y0	703 aa		31.71	■■■□□ 2.67
CHFR-215	ENST00000537551	TNS2	Q63HR2	1409 aa		31.7	■■■□□ 2.67
CHFR-215	ENST00000537551	APBA3	O96018	575 aa		31.69	■■■□□ 2.66
CHFR-215	ENST00000537551	RGPD2	P0DJD1	1756 aa		31.68	■■■□□ 2.66
CHFR-215	ENST00000537551	EN1	Q05925	392 aa	Predicted RBP	31.68	■■■□□ 2.66
CHFR-215	ENST00000537551	CC2D1B	Q5T0F9	858 aa	Known RBP	31.66	■■■□□ 2.66
CHFR-215	ENST00000537551	RAPGEF4	Q8WZA2	1011 aa		31.65	■■■□□ 2.66
CHFR-215	ENST00000537551	CNGB1	Q14028	1251 aa	Predicted RBP	31.64	■■■□□ 2.66
CHFR-215	ENST00000537551	DDX54	Q8TDD1	881 aa	Known RBP	31.64	■■■□□ 2.66
CHFR-215	ENST00000537551	TAT	P17735	454 aa	Predicted RBP	31.62	■■■□□ 2.65
CHFR-215	ENST00000537551	TNS1	Q9HBL0	1735 aa	Known RBP	31.61	■■■□□ 2.65
CHFR-215	ENST00000537551	ZCRB1	Q8TBF4	217 aa	Known RBP	31.61	■■■□□ 2.65
CHFR-215	ENST00000537551	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.6	■■■□□ 2.65
CHFR-215	ENST00000537551	BCL9	O00512	1426 aa		31.59	■■■□□ 2.65
CHFR-215	ENST00000537551	EIF4A2	Q14240	407 aa	Known RBP	31.59	■■■□□ 2.65
CHFR-215	ENST00000537551	EZH2	Q15910	746 aa	Known RBP	31.59	■■■□□ 2.65
CHFR-215	ENST00000537551	EYA1	Q99502	592 aa		31.59	■■■□□ 2.65
CHFR-215	ENST00000537551	MEGF6	O75095	1541 aa		31.59	■■■□□ 2.65
CHFR-215	ENST00000537551	ACSBG1	Q96GR2	724 aa		31.57	■■■□□ 2.64
CHFR-215	ENST00000537551	CAMKK2	Q96RR4	588 aa		31.57	■■■□□ 2.64
CHFR-215	ENST00000537551	PTF1A	Q7RTS3	328 aa		31.55	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms