RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 LARP1Q6PKG0 1096 aaKnown RBP24.07■■□□□ 1.44
GPN3-202ENST00000537466 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.44
GPN3-202ENST00000537466 AXIN2Q9Y2T1 843 aa24.07■■□□□ 1.44
GPN3-202ENST00000537466 C11orf95C9JLR9 678 aaPredicted RBP24.05■■□□□ 1.44
GPN3-202ENST00000537466 CARD14Q9BXL6 1004 aa24.05■■□□□ 1.44
GPN3-202ENST00000537466 EP400Q96L91 3159 aa24.04■■□□□ 1.44
GPN3-202ENST00000537466 ABCC6O95255 1503 aa24.04■■□□□ 1.44
GPN3-202ENST00000537466 USP35Q9P2H5 1018 aa24.03■■□□□ 1.44
GPN3-202ENST00000537466 NSD3Q9BZ95 1437 aa24.03■■□□□ 1.44
GPN3-202ENST00000537466 A0A0G2JS52 829 aa24.02■■□□□ 1.44
GPN3-202ENST00000537466 FYB1O15117 783 aa24.02■■□□□ 1.44
GPN3-202ENST00000537466 MYT1Q01538 1121 aa24.02■■□□□ 1.44
GPN3-202ENST00000537466 WNK3Q9BYP7 1800 aa24.02■■□□□ 1.44
GPN3-202ENST00000537466 COG3Q96JB2 828 aa24.01■■□□□ 1.43
GPN3-202ENST00000537466 CRB1P82279 1406 aa24.01■■□□□ 1.43
GPN3-202ENST00000537466 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
GPN3-202ENST00000537466 FBLN1P23142 703 aa23.98■■□□□ 1.43
GPN3-202ENST00000537466 WDR17Q8IZU2 1322 aa23.97■■□□□ 1.43
GPN3-202ENST00000537466 KRT27Q7Z3Y8 459 aa23.97■■□□□ 1.43
GPN3-202ENST00000537466 PARP4Q9UKK3 1724 aaKnown RBP23.97■■□□□ 1.43
GPN3-202ENST00000537466 BARGINQ6ZT62 677 aa23.96■■□□□ 1.43
GPN3-202ENST00000537466 TCP11L2Q8N4U5 519 aa23.96■■□□□ 1.43
GPN3-202ENST00000537466 ANKRD26Q9UPS8 1709 aa23.96■■□□□ 1.43
GPN3-202ENST00000537466 TOM1L2Q6ZVM7 507 aa23.95■■□□□ 1.42
GPN3-202ENST00000537466 KIF7Q2M1P5 1343 aa23.94■■□□□ 1.42
GPN3-202ENST00000537466 THRAP3Q9Y2W1 955 aaKnown RBP23.93■■□□□ 1.42
GPN3-202ENST00000537466 MAP3K19Q56UN5 1328 aa23.92■■□□□ 1.42
GPN3-202ENST00000537466 CSB-PGBD3P0DP91 1061 aa23.92■■□□□ 1.42
GPN3-202ENST00000537466 PANK3Q9H999 370 aa23.92■■□□□ 1.42
GPN3-202ENST00000537466 RGPD2P0DJD1 1756 aa23.91■■□□□ 1.42
GPN3-202ENST00000537466 FAM182BQ5T319 152 aa23.91■■□□□ 1.42
GPN3-202ENST00000537466 PEAK1Q9H792 1746 aa23.91■■□□□ 1.42
GPN3-202ENST00000537466 LRRC37A3O60309 1634 aa23.91■■□□□ 1.42
GPN3-202ENST00000537466 ERBB3P21860 1342 aa23.91■■□□□ 1.42
GPN3-202ENST00000537466 MAP2P11137 1827 aaKnown RBP23.9■■□□□ 1.42
GPN3-202ENST00000537466 BLMP54132 1417 aaPredicted RBP23.9■■□□□ 1.42
GPN3-202ENST00000537466 FAM208AQ9UK61 1670 aaKnown RBP23.9■■□□□ 1.42
GPN3-202ENST00000537466 RRS1Q15050 365 aaKnown RBP23.89■■□□□ 1.42
GPN3-202ENST00000537466 IP6K1Q92551 441 aa23.89■■□□□ 1.42
GPN3-202ENST00000537466 CGNL1Q0VF96 1302 aa23.89■■□□□ 1.41
GPN3-202ENST00000537466 CARD10Q9BWT7 1032 aa23.88■■□□□ 1.41
GPN3-202ENST00000537466 ANKRD24Q8TF21 1146 aa23.87■■□□□ 1.41
GPN3-202ENST00000537466 HOXC9P31274 260 aa23.87■■□□□ 1.41
GPN3-202ENST00000537466 AMPHP49418 695 aa23.86■■□□□ 1.41
GPN3-202ENST00000537466 DISP2A7MBM2 1401 aa23.84■■□□□ 1.41
GPN3-202ENST00000537466 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
GPN3-202ENST00000537466 RTL1A6NKG5 1358 aa23.84■■□□□ 1.41
GPN3-202ENST00000537466 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
GPN3-202ENST00000537466 LTV1Q96GA3 475 aaPredicted RBP23.83■■□□□ 1.41
GPN3-202ENST00000537466 NLRP2Q9NX02 1062 aa23.83■■□□□ 1.41
GPN3-202ENST00000537466 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
GPN3-202ENST00000537466 CCDC125Q86Z20 511 aa23.82■■□□□ 1.4
GPN3-202ENST00000537466 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
GPN3-202ENST00000537466 WASHC2AQ641Q2 1341 aa23.81■■□□□ 1.4
GPN3-202ENST00000537466 SBF2Q86WG5 1849 aa23.8■■□□□ 1.4
GPN3-202ENST00000537466 EMILIN1Q9Y6C2 1016 aa23.8■■□□□ 1.4
GPN3-202ENST00000537466 DDB1Q16531 1140 aa23.79■■□□□ 1.4
GPN3-202ENST00000537466 FLT4P35916 1363 aa23.78■■□□□ 1.4
GPN3-202ENST00000537466 CDCA7Q9BWT1 371 aaPredicted RBP23.78■■□□□ 1.4
GPN3-202ENST00000537466 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
GPN3-202ENST00000537466 NSD2O96028 1365 aa23.77■■□□□ 1.4
GPN3-202ENST00000537466 KIF24Q5T7B8 1368 aa23.77■■□□□ 1.4
GPN3-202ENST00000537466 TNNT2P45379 298 aaPredicted RBP23.76■■□□□ 1.39
GPN3-202ENST00000537466 FAM196AQ6ZSG2 479 aa23.76■■□□□ 1.39
GPN3-202ENST00000537466 KNSTRNQ9Y448 316 aa23.76■■□□□ 1.39
GPN3-202ENST00000537466 INSRP06213 1382 aa23.76■■□□□ 1.39
GPN3-202ENST00000537466 DEFB132Q7Z7B7 95 aa23.75■■□□□ 1.39
GPN3-202ENST00000537466 SF3B2Q13435 895 aaKnown RBP23.74■■□□□ 1.39
GPN3-202ENST00000537466 TNS2Q63HR2 1409 aa23.74■■□□□ 1.39
GPN3-202ENST00000537466 OVOS2A0A0G2JMS6 1433 aa23.73■■□□□ 1.39
GPN3-202ENST00000537466 PPM1GO15355 546 aaPredicted RBP23.73■■□□□ 1.39
GPN3-202ENST00000537466 IL2RBP14784 551 aa23.73■■□□□ 1.39
GPN3-202ENST00000537466 AMER1Q5JTC6 1135 aaPredicted RBP23.73■■□□□ 1.39
GPN3-202ENST00000537466 POLKQ9UBT6 870 aa23.73■■□□□ 1.39
GPN3-202ENST00000537466 SMG6Q86US8 1419 aaKnown RBP23.72■■□□□ 1.39
GPN3-202ENST00000537466 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
GPN3-202ENST00000537466 TRIM37O94972 964 aa23.72■■□□□ 1.39
GPN3-202ENST00000537466 MARCH10Q8NA82 808 aaPredicted RBP23.72■■□□□ 1.39
GPN3-202ENST00000537466 SHANK3Q9BYB0 1731 aa23.72■■□□□ 1.39
GPN3-202ENST00000537466 EXOC5O00471 708 aa23.71■■□□□ 1.39
GPN3-202ENST00000537466 NBPF6Q5VWK0 638 aa23.71■■□□□ 1.39
GPN3-202ENST00000537466 NBPF4Q96M43 638 aa23.71■■□□□ 1.39
GPN3-202ENST00000537466 MORC1Q86VD1 984 aa23.69■■□□□ 1.38
GPN3-202ENST00000537466 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
GPN3-202ENST00000537466 MEGF6O75095 1541 aa23.68■■□□□ 1.38
GPN3-202ENST00000537466 BAG6P46379 1132 aa23.66■■□□□ 1.38
GPN3-202ENST00000537466 BCL9O00512 1426 aa23.64■■□□□ 1.38
GPN3-202ENST00000537466 EN1Q05925 392 aaPredicted RBP23.64■■□□□ 1.38
GPN3-202ENST00000537466 CC2D1BQ5T0F9 858 aaKnown RBP23.63■■□□□ 1.37
GPN3-202ENST00000537466 KAT6BQ8WYB5 2073 aa23.63■■□□□ 1.37
GPN3-202ENST00000537466 NHSQ6T4R5 1651 aa23.62■■□□□ 1.37
GPN3-202ENST00000537466 NCAPD2Q15021 1401 aa23.62■■□□□ 1.37
GPN3-202ENST00000537466 APBA3O96018 575 aa23.62■■□□□ 1.37
GPN3-202ENST00000537466 PTF1AQ7RTS3 328 aa23.62■■□□□ 1.37
GPN3-202ENST00000537466 RREB1Q92766 1687 aa23.61■■□□□ 1.37
GPN3-202ENST00000537466 EIF4A2Q14240 407 aaKnown RBP23.6■■□□□ 1.37
GPN3-202ENST00000537466 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
GPN3-202ENST00000537466 CNGB1Q14028 1251 aaPredicted RBP23.59■■□□□ 1.37
GPN3-202ENST00000537466 EZH2Q15910 746 aaKnown RBP23.59■■□□□ 1.37
GPN3-202ENST00000537466 EYA1Q99502 592 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms