RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 ABCC6O95255 1503 aa28.88■■■□□ 2.21
LPCAT3-204ENST00000536797 RGS12O14924 1447 aa28.87■■■□□ 2.21
LPCAT3-204ENST00000536797 COL5A2P05997 1499 aaPredicted RBP28.86■■■□□ 2.21
LPCAT3-204ENST00000536797 RGPD5Q99666 1765 aa28.84■■■□□ 2.21
LPCAT3-204ENST00000536797 SPATA31A5Q5VU36 1347 aa28.83■■■□□ 2.21
LPCAT3-204ENST00000536797 SPATA31A7Q8IWB4 1347 aa28.83■■■□□ 2.21
LPCAT3-204ENST00000536797 AXIN2Q9Y2T1 843 aa28.83■■■□□ 2.21
LPCAT3-204ENST00000536797 ANKRD26Q9UPS8 1709 aa28.83■■■□□ 2.21
LPCAT3-204ENST00000536797 KNSTRNQ9Y448 316 aa28.82■■■□□ 2.2
LPCAT3-204ENST00000536797 LARP1Q6PKG0 1096 aaKnown RBP28.81■■■□□ 2.2
LPCAT3-204ENST00000536797 SPATA31A1Q5TZJ5 1347 aa28.8■■■□□ 2.2
LPCAT3-204ENST00000536797 NSD2O96028 1365 aa28.79■■■□□ 2.2
LPCAT3-204ENST00000536797 FBLN1P23142 703 aa28.78■■■□□ 2.2
LPCAT3-204ENST00000536797 MAP3K19Q56UN5 1328 aa28.78■■■□□ 2.2
LPCAT3-204ENST00000536797 CRB1P82279 1406 aa28.78■■■□□ 2.2
LPCAT3-204ENST00000536797 SOCS7O14512 581 aa28.77■■■□□ 2.2
LPCAT3-204ENST00000536797 USP35Q9P2H5 1018 aa28.77■■■□□ 2.2
LPCAT3-204ENST00000536797 WDR17Q8IZU2 1322 aa28.77■■■□□ 2.2
LPCAT3-204ENST00000536797 AMPHP49418 695 aa28.76■■■□□ 2.19
LPCAT3-204ENST00000536797 FAM98CQ17RN3 349 aaKnown RBP28.76■■■□□ 2.19
LPCAT3-204ENST00000536797 BLMP54132 1417 aaPredicted RBP28.76■■■□□ 2.19
LPCAT3-204ENST00000536797 ONECUT3O60422 494 aaPredicted RBP28.75■■■□□ 2.19
LPCAT3-204ENST00000536797 CSB-PGBD3P0DP91 1061 aa28.75■■■□□ 2.19
LPCAT3-204ENST00000536797 RRS1Q15050 365 aaKnown RBP28.75■■■□□ 2.19
LPCAT3-204ENST00000536797 TOM1L2Q6ZVM7 507 aa28.75■■■□□ 2.19
LPCAT3-204ENST00000536797 IP6K1Q92551 441 aa28.75■■■□□ 2.19
LPCAT3-204ENST00000536797 A0A0G2JS52 829 aa28.74■■■□□ 2.19
LPCAT3-204ENST00000536797 MYT1Q01538 1121 aa28.74■■■□□ 2.19
LPCAT3-204ENST00000536797 RTL1A6NKG5 1358 aa28.73■■■□□ 2.19
LPCAT3-204ENST00000536797 SEPT12Q8IYM1 358 aa28.73■■■□□ 2.19
LPCAT3-204ENST00000536797 ERBB3P21860 1342 aa28.72■■■□□ 2.19
LPCAT3-204ENST00000536797 TCP11L2Q8N4U5 519 aa28.72■■■□□ 2.19
LPCAT3-204ENST00000536797 HOXC9P31274 260 aa28.71■■■□□ 2.19
LPCAT3-204ENST00000536797 THRAP3Q9Y2W1 955 aaKnown RBP28.71■■■□□ 2.19
LPCAT3-204ENST00000536797 PER1O15534 1290 aaPredicted RBP28.7■■■□□ 2.19
LPCAT3-204ENST00000536797 ANKRD24Q8TF21 1146 aa28.7■■■□□ 2.19
LPCAT3-204ENST00000536797 BRWD3Q6RI45 1802 aa28.7■■■□□ 2.18
LPCAT3-204ENST00000536797 AMER1Q5JTC6 1135 aaPredicted RBP28.69■■■□□ 2.18
LPCAT3-204ENST00000536797 BARGINQ6ZT62 677 aa28.69■■■□□ 2.18
LPCAT3-204ENST00000536797 THSD7AQ9UPZ6 1657 aa28.69■■■□□ 2.18
LPCAT3-204ENST00000536797 MAP2P11137 1827 aaKnown RBP28.69■■■□□ 2.18
LPCAT3-204ENST00000536797 KIF24Q5T7B8 1368 aa28.69■■■□□ 2.18
LPCAT3-204ENST00000536797 MORC1Q86VD1 984 aa28.68■■■□□ 2.18
LPCAT3-204ENST00000536797 PEAK1Q9H792 1746 aa28.67■■■□□ 2.18
LPCAT3-204ENST00000536797 TNNT2P45379 298 aaPredicted RBP28.67■■■□□ 2.18
LPCAT3-204ENST00000536797 CARD10Q9BWT7 1032 aa28.67■■■□□ 2.18
LPCAT3-204ENST00000536797 FAM208AQ9UK61 1670 aaKnown RBP28.67■■■□□ 2.18
LPCAT3-204ENST00000536797 FLT4P35916 1363 aa28.66■■■□□ 2.18
LPCAT3-204ENST00000536797 EMILIN1Q9Y6C2 1016 aa28.66■■■□□ 2.18
LPCAT3-204ENST00000536797 LTV1Q96GA3 475 aaPredicted RBP28.65■■■□□ 2.18
LPCAT3-204ENST00000536797 NLRP2Q9NX02 1062 aa28.64■■■□□ 2.18
LPCAT3-204ENST00000536797 PPM1GO15355 546 aaPredicted RBP28.63■■■□□ 2.17
LPCAT3-204ENST00000536797 WNK3Q9BYP7 1800 aa28.63■■■□□ 2.17
LPCAT3-204ENST00000536797 SMG6Q86US8 1419 aaKnown RBP28.62■■■□□ 2.17
LPCAT3-204ENST00000536797 INSRP06213 1382 aa28.62■■■□□ 2.17
LPCAT3-204ENST00000536797 KRT27Q7Z3Y8 459 aa28.61■■■□□ 2.17
LPCAT3-204ENST00000536797 POLKQ9UBT6 870 aa28.61■■■□□ 2.17
LPCAT3-204ENST00000536797 NPC1L1Q9UHC9 1359 aa28.61■■■□□ 2.17
LPCAT3-204ENST00000536797 HSP90AB2PQ58FF8 381 aa28.6■■■□□ 2.17
LPCAT3-204ENST00000536797 CC2D1BQ5T0F9 858 aaKnown RBP28.6■■■□□ 2.17
LPCAT3-204ENST00000536797 PARP4Q9UKK3 1724 aaKnown RBP28.6■■■□□ 2.17
LPCAT3-204ENST00000536797 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
LPCAT3-204ENST00000536797 RGPD2P0DJD1 1756 aa28.56■■■□□ 2.16
LPCAT3-204ENST00000536797 DISP2A7MBM2 1401 aa28.55■■■□□ 2.16
LPCAT3-204ENST00000536797 CNGB1Q14028 1251 aaPredicted RBP28.54■■■□□ 2.16
LPCAT3-204ENST00000536797 LRRC37A3O60309 1634 aa28.54■■■□□ 2.16
LPCAT3-204ENST00000536797 PDE3BQ13370 1112 aa28.53■■■□□ 2.16
LPCAT3-204ENST00000536797 EP400Q96L91 3159 aa28.53■■■□□ 2.16
LPCAT3-204ENST00000536797 UPF1Q92900 1129 aaKnown RBP eCLIP28.52■■■□□ 2.16
LPCAT3-204ENST00000536797 DDB1Q16531 1140 aa28.52■■■□□ 2.16
LPCAT3-204ENST00000536797 IL2RBP14784 551 aa28.51■■■□□ 2.15
LPCAT3-204ENST00000536797 NBPF6Q5VWK0 638 aa28.49■■■□□ 2.15
LPCAT3-204ENST00000536797 NBPF4Q96M43 638 aa28.49■■■□□ 2.15
LPCAT3-204ENST00000536797 DDX10Q13206 875 aaKnown RBP28.47■■■□□ 2.15
LPCAT3-204ENST00000536797 FAM182BQ5T319 152 aa28.47■■■□□ 2.15
LPCAT3-204ENST00000536797 EXOC5O00471 708 aa28.46■■■□□ 2.15
LPCAT3-204ENST00000536797 EIF4A2Q14240 407 aaKnown RBP28.44■■■□□ 2.14
LPCAT3-204ENST00000536797 TNS2Q63HR2 1409 aa28.44■■■□□ 2.14
LPCAT3-204ENST00000536797 USHBP1Q8N6Y0 703 aa28.44■■■□□ 2.14
LPCAT3-204ENST00000536797 MTHFSP49914 203 aa28.43■■■□□ 2.14
LPCAT3-204ENST00000536797 FAM196AQ6ZSG2 479 aa28.43■■■□□ 2.14
LPCAT3-204ENST00000536797 CCDC125Q86Z20 511 aa28.41■■■□□ 2.14
LPCAT3-204ENST00000536797 OVOS2A0A0G2JMS6 1433 aa28.4■■■□□ 2.14
LPCAT3-204ENST00000536797 RAPGEF4Q8WZA2 1011 aa28.4■■■□□ 2.14
LPCAT3-204ENST00000536797 EYA1Q99502 592 aa28.4■■■□□ 2.14
LPCAT3-204ENST00000536797 MEGF6O75095 1541 aa28.4■■■□□ 2.14
LPCAT3-204ENST00000536797 NCAPD2Q15021 1401 aa28.39■■■□□ 2.13
LPCAT3-204ENST00000536797 ZNF316A6NFI3 1004 aaPredicted RBP28.37■■■□□ 2.13
LPCAT3-204ENST00000536797 TATP17735 454 aaPredicted RBP28.37■■■□□ 2.13
LPCAT3-204ENST00000536797 MARCH10Q8NA82 808 aaPredicted RBP28.37■■■□□ 2.13
LPCAT3-204ENST00000536797 RGPD1P0DJD0 1748 aa28.36■■■□□ 2.13
LPCAT3-204ENST00000536797 SF3B2Q13435 895 aaKnown RBP28.35■■■□□ 2.13
LPCAT3-204ENST00000536797 IGSF1Q8N6C5 1336 aa28.34■■■□□ 2.13
LPCAT3-204ENST00000536797 ZCRB1Q8TBF4 217 aaKnown RBP28.33■■■□□ 2.13
LPCAT3-204ENST00000536797 PPP2R1AP30153 589 aa28.32■■■□□ 2.12
LPCAT3-204ENST00000536797 IL13P35225 146 aa28.32■■■□□ 2.12
LPCAT3-204ENST00000536797 PARD3Q8TEW0 1356 aa28.32■■■□□ 2.12
LPCAT3-204ENST00000536797 SHANK3Q9BYB0 1731 aa28.31■■■□□ 2.12
LPCAT3-204ENST00000536797 BCL9O00512 1426 aa28.31■■■□□ 2.12
LPCAT3-204ENST00000536797 SBF2Q86WG5 1849 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms