RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
MRPS35-202ENST00000536569 NFAT5O94916 1531 aa18.6■□□□□ 0.57
MRPS35-202ENST00000536569 EDC4Q6P2E9 1401 aaKnown RBP18.6■□□□□ 0.57
MRPS35-202ENST00000536569 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
MRPS35-202ENST00000536569 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
MRPS35-202ENST00000536569 TMC1Q8TDI8 760 aa18.6■□□□□ 0.57
MRPS35-202ENST00000536569 AXIN2Q9Y2T1 843 aa18.6■□□□□ 0.57
MRPS35-202ENST00000536569 TESK2Q96S53 571 aa18.59■□□□□ 0.57
MRPS35-202ENST00000536569 TRIM37O94972 964 aa18.58■□□□□ 0.56
MRPS35-202ENST00000536569 SLC12A5Q9H2X9 1139 aa18.58■□□□□ 0.56
MRPS35-202ENST00000536569 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
MRPS35-202ENST00000536569 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
MRPS35-202ENST00000536569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
MRPS35-202ENST00000536569 CAMKK2Q96RR4 588 aa18.57■□□□□ 0.56
MRPS35-202ENST00000536569 CARD10Q9BWT7 1032 aa18.57■□□□□ 0.56
MRPS35-202ENST00000536569 TIMELESSQ9UNS1 1208 aa18.57■□□□□ 0.56
MRPS35-202ENST00000536569 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 APBA3O96018 575 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 DDB1Q16531 1140 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 OVOS2A0A0G2JMS6 1433 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 OVOS2A0A0J9YW53 1432 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 OVOS2Q6IE36 1432 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 A0A1W2PP64 1363 aa18.55■□□□□ 0.56
MRPS35-202ENST00000536569 SOX12O15370 315 aa18.54■□□□□ 0.56
MRPS35-202ENST00000536569 CSB-PGBD3P0DP91 1061 aa18.54■□□□□ 0.56
MRPS35-202ENST00000536569 NME9Q86XW9 330 aa18.54■□□□□ 0.56
MRPS35-202ENST00000536569 CCDC7Q96M83 1385 aa18.54■□□□□ 0.56
MRPS35-202ENST00000536569 BCL9O00512 1426 aa18.53■□□□□ 0.56
MRPS35-202ENST00000536569 EZH2Q15910 746 aaKnown RBP18.53■□□□□ 0.56
MRPS35-202ENST00000536569 LRRC37A3O60309 1634 aa18.52■□□□□ 0.56
MRPS35-202ENST00000536569 LRP5O75197 1615 aa18.52■□□□□ 0.55
MRPS35-202ENST00000536569 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
MRPS35-202ENST00000536569 WNK3Q9BYP7 1800 aa18.51■□□□□ 0.55
MRPS35-202ENST00000536569 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
MRPS35-202ENST00000536569 TMF1P82094 1093 aa18.5■□□□□ 0.55
MRPS35-202ENST00000536569 USP47Q96K76 1375 aa18.5■□□□□ 0.55
MRPS35-202ENST00000536569 ERBB3P21860 1342 aa18.49■□□□□ 0.55
MRPS35-202ENST00000536569 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
MRPS35-202ENST00000536569 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
MRPS35-202ENST00000536569 PSDA5PKW4 1024 aaPredicted RBP18.48■□□□□ 0.55
MRPS35-202ENST00000536569 EXOC5O00471 708 aa18.48■□□□□ 0.55
MRPS35-202ENST00000536569 RREB1Q92766 1687 aa18.47■□□□□ 0.55
MRPS35-202ENST00000536569 PLSCR1O15162 318 aa18.47■□□□□ 0.55
MRPS35-202ENST00000536569 NBPF14Q5TI25 921 aa18.47■□□□□ 0.55
MRPS35-202ENST00000536569 BCL11BQ9C0K0 894 aaPredicted RBP18.47■□□□□ 0.55
MRPS35-202ENST00000536569 LTN1O94822 1766 aa18.46■□□□□ 0.55
MRPS35-202ENST00000536569 R3HDM1Q15032 1099 aaKnown RBP18.46■□□□□ 0.55
MRPS35-202ENST00000536569 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
MRPS35-202ENST00000536569 COG3Q96JB2 828 aa18.46■□□□□ 0.55
MRPS35-202ENST00000536569 RGPD3A6NKT7 1758 aaPredicted RBP18.45■□□□□ 0.54
MRPS35-202ENST00000536569 RGPD4Q7Z3J3 1758 aa18.45■□□□□ 0.54
MRPS35-202ENST00000536569 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
MRPS35-202ENST00000536569 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
MRPS35-202ENST00000536569 IP6K1Q92551 441 aa18.44■□□□□ 0.54
MRPS35-202ENST00000536569 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
MRPS35-202ENST00000536569 SBF2Q86WG5 1849 aa18.44■□□□□ 0.54
MRPS35-202ENST00000536569 IL2RBP14784 551 aa18.42■□□□□ 0.54
MRPS35-202ENST00000536569 NUP188Q5SRE5 1749 aa18.42■□□□□ 0.54
MRPS35-202ENST00000536569 FAM208AQ9UK61 1670 aaKnown RBP18.4■□□□□ 0.54
MRPS35-202ENST00000536569 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
MRPS35-202ENST00000536569 FYB1O15117 783 aa18.38■□□□□ 0.53
MRPS35-202ENST00000536569 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
MRPS35-202ENST00000536569 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
MRPS35-202ENST00000536569 HOXC9P31274 260 aa18.37■□□□□ 0.53
MRPS35-202ENST00000536569 AMPHP49418 695 aa18.37■□□□□ 0.53
MRPS35-202ENST00000536569 KIF24Q5T7B8 1368 aa18.34■□□□□ 0.53
MRPS35-202ENST00000536569 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
MRPS35-202ENST00000536569 PROM2Q8N271 834 aa18.33■□□□□ 0.52
MRPS35-202ENST00000536569 NHSQ6T4R5 1651 aa18.33■□□□□ 0.52
MRPS35-202ENST00000536569 GGNBP2Q9H3C7 697 aa18.32■□□□□ 0.52
MRPS35-202ENST00000536569 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
MRPS35-202ENST00000536569 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
MRPS35-202ENST00000536569 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
MRPS35-202ENST00000536569 KCNQ2O43526 872 aa18.3■□□□□ 0.52
MRPS35-202ENST00000536569 SPON1Q9HCB6 807 aa18.3■□□□□ 0.52
MRPS35-202ENST00000536569 SMG6Q86US8 1419 aaKnown RBP18.3■□□□□ 0.52
MRPS35-202ENST00000536569 MYOM1P52179 1685 aa18.29■□□□□ 0.52
MRPS35-202ENST00000536569 KIF20BQ96Q89 1820 aa18.29■□□□□ 0.52
MRPS35-202ENST00000536569 FBLN1P23142 703 aa18.29■□□□□ 0.52
MRPS35-202ENST00000536569 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
MRPS35-202ENST00000536569 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
MRPS35-202ENST00000536569 INSRP06213 1382 aa18.29■□□□□ 0.52
MRPS35-202ENST00000536569 ANO8Q9HCE9 1232 aaPredicted RBP18.28■□□□□ 0.52
MRPS35-202ENST00000536569 FLT4P35916 1363 aa18.28■□□□□ 0.52
MRPS35-202ENST00000536569 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
MRPS35-202ENST00000536569 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
MRPS35-202ENST00000536569 STK32BQ9NY57 414 aa18.27■□□□□ 0.52
MRPS35-202ENST00000536569 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
MRPS35-202ENST00000536569 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
MRPS35-202ENST00000536569 CCER1Q8TC90 406 aaPredicted RBP18.26■□□□□ 0.51
MRPS35-202ENST00000536569 DDX54Q8TDD1 881 aaKnown RBP18.26■□□□□ 0.51
MRPS35-202ENST00000536569 SLC15A2Q16348 729 aa18.25■□□□□ 0.51
MRPS35-202ENST00000536569 NBPF6Q5VWK0 638 aa18.25■□□□□ 0.51
MRPS35-202ENST00000536569 NBPF4Q96M43 638 aa18.25■□□□□ 0.51
MRPS35-202ENST00000536569 CASZ1Q86V15 1759 aa18.23■□□□□ 0.51
MRPS35-202ENST00000536569 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
MRPS35-202ENST00000536569 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
MRPS35-202ENST00000536569 BTAF1O14981 1849 aa18.23■□□□□ 0.51
MRPS35-202ENST00000536569 MEGF6O75095 1541 aa18.23■□□□□ 0.51
MRPS35-202ENST00000536569 SLC27A3Q5K4L6 730 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms