RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 SLC15A2Q16348 729 aa7.78□□□□□ -1.16
CHD4-205ENST00000536301 TXNRD1Q16881 649 aa7.78□□□□□ -1.16
CHD4-205ENST00000536301 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
CHD4-205ENST00000536301 CDK19Q9BWU1 502 aa7.78□□□□□ -1.16
CHD4-205ENST00000536301 KDM2AQ9Y2K7 1162 aa7.78□□□□□ -1.16
CHD4-205ENST00000536301 PAPPAQ13219 1627 aa7.78□□□□□ -1.16
CHD4-205ENST00000536301 GCP02774 474 aa7.77□□□□□ -1.17
CHD4-205ENST00000536301 DDB1Q16531 1140 aa7.77□□□□□ -1.17
CHD4-205ENST00000536301 STK32BQ9NY57 414 aa7.77□□□□□ -1.17
CHD4-205ENST00000536301 AXIN2Q9Y2T1 843 aa7.77□□□□□ -1.17
CHD4-205ENST00000536301 PLEKHG3A1L390 1219 aa7.76□□□□□ -1.17
CHD4-205ENST00000536301 MTFR1LQ9H019 292 aa7.76□□□□□ -1.17
CHD4-205ENST00000536301 TUBGCP6Q96RT7 1819 aa7.75□□□□□ -1.17
CHD4-205ENST00000536301 SLIT3O75094 1523 aa7.75□□□□□ -1.17
CHD4-205ENST00000536301 GIGYF1O75420 1035 aaPredicted RBP7.75□□□□□ -1.17
CHD4-205ENST00000536301 ZNF827Q17R98 1081 aa7.75□□□□□ -1.17
CHD4-205ENST00000536301 ARXQ96QS3 562 aa7.75□□□□□ -1.17
CHD4-205ENST00000536301 CCDC61Q9Y6R9 512 aa7.75□□□□□ -1.17
CHD4-205ENST00000536301 PIK3C2AO00443 1686 aa7.75□□□□□ -1.17
CHD4-205ENST00000536301 AATKQ6ZMQ8 1374 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 NHSQ6T4R5 1651 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 BTAF1O14981 1849 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 TOM1L2Q6ZVM7 507 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 NLRP13Q86W25 1043 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 DCAF11Q8TEB1 546 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 ACSBG1Q96GR2 724 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 BCL9O00512 1426 aa7.74□□□□□ -1.17
CHD4-205ENST00000536301 MAP3K5Q99683 1374 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 COL24A1Q17RW2 1714 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 PPIP5K1Q6PFW1 1433 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 GPR162Q16538 588 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 PELP1Q8IZL8 1130 aaKnown RBP7.73□□□□□ -1.17
CHD4-205ENST00000536301 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 NLGN2Q8NFZ4 835 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 WDR17Q8IZU2 1322 aa7.73□□□□□ -1.17
CHD4-205ENST00000536301 C11orf95C9JLR9 678 aaPredicted RBP7.72□□□□□ -1.17
CHD4-205ENST00000536301 NLRP6P59044 892 aa7.72□□□□□ -1.17
CHD4-205ENST00000536301 CABP2Q9NPB3 220 aa7.72□□□□□ -1.17
CHD4-205ENST00000536301 USP6P35125 1406 aa7.71□□□□□ -1.17
CHD4-205ENST00000536301 CPSF1Q10570 1443 aaKnown RBP7.71□□□□□ -1.17
CHD4-205ENST00000536301 TNS2Q63HR2 1409 aa7.71□□□□□ -1.17
CHD4-205ENST00000536301 SOX12O15370 315 aa7.71□□□□□ -1.18
CHD4-205ENST00000536301 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.186e-9■□□□□ 11
CHD4-205ENST00000536301 NBPF1Q3BBV0 1214 aa7.71□□□□□ -1.18
CHD4-205ENST00000536301 KCNQ4P56696 695 aa7.7□□□□□ -1.18
CHD4-205ENST00000536301 ARHGEF25Q86VW2 580 aa7.7□□□□□ -1.18
CHD4-205ENST00000536301 CARD10Q9BWT7 1032 aa7.7□□□□□ -1.18
CHD4-205ENST00000536301 TRPM1Q7Z4N2 1603 aa7.7□□□□□ -1.18
CHD4-205ENST00000536301 QSER1Q2KHR3 1735 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 NFAT5O94916 1531 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 EXOC5O00471 708 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 SRPK2P78362 688 aaKnown RBP7.69□□□□□ -1.18
CHD4-205ENST00000536301 AKT1S1Q96B36 256 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 PNPLA7Q6ZV29 1317 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 QRICH2Q9H0J4 1663 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 RAB3GAP2Q9H2M9 1393 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 ATP10DQ9P241 1426 aa7.69□□□□□ -1.18
CHD4-205ENST00000536301 CSB-PGBD3P0DP91 1061 aa7.68□□□□□ -1.18
CHD4-205ENST00000536301 ABCC6O95255 1503 aa7.68□□□□□ -1.18
CHD4-205ENST00000536301 KIAA1210Q9ULL0 1709 aa7.67□□□□□ -1.18
CHD4-205ENST00000536301 CDCA7Q9BWT1 371 aaPredicted RBP7.67□□□□□ -1.18
CHD4-205ENST00000536301 BRD4O60885 1362 aaPredicted RBP7.67□□□□□ -1.18
CHD4-205ENST00000536301 ZNF526Q8TF50 670 aaPredicted RBP7.66□□□□□ -1.18
CHD4-205ENST00000536301 TTC21BQ7Z4L5 1316 aa7.66□□□□□ -1.18
CHD4-205ENST00000536301 CCDC7Q96M83 1385 aa7.66□□□□□ -1.18
CHD4-205ENST00000536301 ADCY9O60503 1353 aa7.65□□□□□ -1.18
CHD4-205ENST00000536301 LTN1O94822 1766 aa7.65□□□□□ -1.18
CHD4-205ENST00000536301 HSPA6P17066 643 aa7.65□□□□□ -1.18
CHD4-205ENST00000536301 MSL1Q68DK7 614 aa7.65□□□□□ -1.18
CHD4-205ENST00000536301 CENPJQ9HC77 1338 aaPredicted RBP7.65□□□□□ -1.18
CHD4-205ENST00000536301 LY75O60449 1722 aa7.64□□□□□ -1.19
CHD4-205ENST00000536301 DOT1LQ8TEK3 1739 aa7.64□□□□□ -1.19
CHD4-205ENST00000536301 NSD2O96028 1365 aa7.64□□□□□ -1.19
CHD4-205ENST00000536301 POLD1P28340 1107 aa7.64□□□□□ -1.19
CHD4-205ENST00000536301 WWC3Q9ULE0 1092 aa7.64□□□□□ -1.19
CHD4-205ENST00000536301 ERBB3P21860 1342 aa7.63□□□□□ -1.19
CHD4-205ENST00000536301 COL23A1Q86Y22 540 aaPredicted RBP7.63□□□□□ -1.19
CHD4-205ENST00000536301 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
CHD4-205ENST00000536301 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
CHD4-205ENST00000536301 RGPD2P0DJD1 1756 aa7.63□□□□□ -1.19
CHD4-205ENST00000536301 MON2Q7Z3U7 1717 aa7.62□□□□□ -1.19
CHD4-205ENST00000536301 IL2RBP14784 551 aa7.62□□□□□ -1.19
CHD4-205ENST00000536301 KCNH5Q8NCM2 988 aa7.62□□□□□ -1.19
CHD4-205ENST00000536301 STAC3Q96MF2 364 aa7.62□□□□□ -1.19
CHD4-205ENST00000536301 GPBP1L1Q9HC44 474 aaPredicted RBP7.62□□□□□ -1.19
CHD4-205ENST00000536301 TFCP2L1Q9NZI6 479 aa7.62□□□□□ -1.19
CHD4-205ENST00000536301 KIF3CO14782 793 aa7.61□□□□□ -1.19
CHD4-205ENST00000536301 GRIN3BO60391 1043 aa7.61□□□□□ -1.19
CHD4-205ENST00000536301 PRIM1P49642 420 aaKnown RBP7.61□□□□□ -1.19
CHD4-205ENST00000536301 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
CHD4-205ENST00000536301 SMIM5Q71RC9 77 aa7.61□□□□□ -1.19
CHD4-205ENST00000536301 NME9Q86XW9 330 aa7.61□□□□□ -1.19
CHD4-205ENST00000536301 DDX54Q8TDD1 881 aaKnown RBP7.61□□□□□ -1.19
CHD4-205ENST00000536301 ANKRD24Q8TF21 1146 aa7.61□□□□□ -1.19
CHD4-205ENST00000536301 USP54Q70EL1 1684 aa7.6□□□□□ -1.19
CHD4-205ENST00000536301 MSH5O43196 834 aa7.6□□□□□ -1.19
CHD4-205ENST00000536301 AMIGO3Q86WK7 504 aa7.6□□□□□ -1.19
CHD4-205ENST00000536301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms